RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 FUT3P21217 361 aa12.73□□□□□ -0.37
CHMP1A-206ENST00000549139 QRFPP83859 136 aa12.73□□□□□ -0.37
CHMP1A-206ENST00000549139 ZNF626Q68DY1 528 aa12.73□□□□□ -0.37
CHMP1A-206ENST00000549139 SIGIRRQ6IA17 410 aa12.73□□□□□ -0.37
CHMP1A-206ENST00000549139 BEND2Q8NDZ0 799 aa12.73□□□□□ -0.37
CHMP1A-206ENST00000549139 OR13A1Q8NGR1 328 aa12.73□□□□□ -0.37
CHMP1A-206ENST00000549139 FAM46BQ96A09 425 aa12.73□□□□□ -0.37
CHMP1A-206ENST00000549139 TM2D1Q9BX74 207 aa12.73□□□□□ -0.37
CHMP1A-206ENST00000549139 TMEM133Q9H2Q1 129 aa12.73□□□□□ -0.37
CHMP1A-206ENST00000549139 STUB1Q9UNE7 303 aa12.73□□□□□ -0.37
CHMP1A-206ENST00000549139 TBL2Q9Y4P3 447 aaKnown RBP12.73□□□□□ -0.37
CHMP1A-206ENST00000549139 IGHV2-26A0A0B4J1V2 119 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 SHISA3A0PJX4 238 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 ODF3BA8MYP8 253 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 CA11O75493 328 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 ARG1P05089 322 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 ARSBP15848 533 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 MYL9P24844 172 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 CDK2P24941 298 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 RPS27AP62979 156 aaKnown RBP12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 UNC119Q13432 240 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 NEDD8Q15843 81 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 C22orf42Q6IC83 251 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 OR10K2Q6IF99 312 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 RAB12Q6IQ22 244 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 OR2W3Q7Z3T1 314 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 RTN4RL2Q86UN3 420 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 TSPAN14Q8NG11 270 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 NEK7Q8TDX7 302 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 CLEC7AQ9BXN2 247 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 TMEM59Q9BXS4 323 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 LINC00574Q9H8X3 128 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 TXNL4BQ9NX01 149 aaKnown RBP12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 SSR3Q9UNL2 185 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 PEX16Q9Y5Y5 336 aa12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 TET2Q6N021 2002 aaPredicted RBP12.72□□□□□ -0.37
CHMP1A-206ENST00000549139 A0A087X0M5 115 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 A0A1B0GX30 115 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 TMEM30CPA0ZSE6 113 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 NPIPB11E5RHQ5 1161 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 PDCD6O75340 191 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 PRB2P02812 416 aaPredicted RBP12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 MT-ND4P03905 459 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 RAB3BP20337 219 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 CD34P28906 385 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 GLP1RP43220 463 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 RAB11BQ15907 218 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 C2orf68Q2NKX9 166 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 SAMD5Q5TGI4 173 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 PRAMEF5Q5TYX0 476 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 ZNF497Q6ZNH5 498 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 Q6ZSV7 163 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 GAPTQ8N292 157 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 ABHD12Q8N2K0 398 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 OR10A7Q8NGE5 316 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 C17orf50Q8WW18 174 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 MALSU1Q96EH3 234 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 CALYQ9NYX4 217 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 FBLN5Q9UBX5 448 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 STEAP1Q9UHE8 339 aa12.71□□□□□ -0.37
CHMP1A-206ENST00000549139 IL1AP01583 271 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 IGHV4-59P01825 116 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 GDNFP39905 211 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 DYNC1I2Q13409 638 aaKnown RBP12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 P2RY14Q15391 338 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 AANATQ16613 207 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 C2orf76Q3KRA6 126 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 MINOS1Q5TGZ0 78 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 LHFPL4Q7Z7J7 247 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 TPRA1Q86W33 373 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 FAM89BQ8N5H3 189 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 OR51D1Q8NGF3 324 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 OR5R1Q8NH85 324 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 MRGPRDQ8TDS7 321 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 FAM3DQ96BQ1 224 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 KIRREL1Q96J84 757 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 NEDD4LQ96PU5 975 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 URM1Q9BTM9 101 aaKnown RBP12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 KCNK15Q9H427 330 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 C16orf95Q9H693 158 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 ETAA1Q9NY74 926 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 IDI2-AS1Q9NZ38 188 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 MINOS1-NBL1R4GNA1 71 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 COL7A1Q02388 2944 aa12.7□□□□□ -0.38
CHMP1A-206ENST00000549139 BTBD17A6NE02 478 aa12.69□□□□□ -0.38
CHMP1A-206ENST00000549139 IFITM5A6NNB3 132 aa12.69□□□□□ -0.38
CHMP1A-206ENST00000549139 AIPO00170 330 aa12.69□□□□□ -0.38
CHMP1A-206ENST00000549139 ORC5O43913 435 aa12.69□□□□□ -0.38
CHMP1A-206ENST00000549139 CD36P16671 472 aa12.69□□□□□ -0.38
CHMP1A-206ENST00000549139 CHATP28329 748 aa12.69□□□□□ -0.38
CHMP1A-206ENST00000549139 CLDN12P56749 244 aa12.69□□□□□ -0.38
CHMP1A-206ENST00000549139 HES5Q5TA89 166 aa12.69□□□□□ -0.38
CHMP1A-206ENST00000549139 BAIAP2L2Q6UXY1 529 aa12.69□□□□□ -0.38
CHMP1A-206ENST00000549139 SLC16A12Q6ZSM3 486 aa12.69□□□□□ -0.38
CHMP1A-206ENST00000549139 ZNF596Q8TC21 504 aa12.69□□□□□ -0.38
CHMP1A-206ENST00000549139 SSX3Q99909 188 aa12.69□□□□□ -0.38
CHMP1A-206ENST00000549139 LPAR5Q9H1C0 372 aa12.69□□□□□ -0.38
CHMP1A-206ENST00000549139 OR51E2Q9H255 320 aa12.69□□□□□ -0.38
CHMP1A-206ENST00000549139 VCX3AQ9NNX9 186 aa12.69□□□□□ -0.38
CHMP1A-206ENST00000549139 TRAV39A0A0B4J263 110 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms