RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 RAB7AP51149 207 aa12.9□□□□□ -0.34
DDX55-212ENST00000544738 DOC2BQ14184 412 aa12.9□□□□□ -0.34
DDX55-212ENST00000544738 RFESDQ8TAC1 157 aa12.9□□□□□ -0.34
DDX55-212ENST00000544738 U3KQK5 164 aa12.9□□□□□ -0.34
DDX55-212ENST00000544738 TMEM30CPA0ZSE6 113 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 FAM90A18PA6NE21 464 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 FAM90A16PA6NEW6 464 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 FAM90A20PA6NIJ5 464 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 FAM90A9PA6NNJ1 464 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 FAM90A12PA8MX19 464 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 FAM90A5PA8MXJ8 464 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 GEMIN2O14893 280 aaKnown RBP12.89□□□□□ -0.35
DDX55-212ENST00000544738 FAM90A15PP0C7V4 464 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 FAM90A13PP0C7W8 464 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 FAM90A14PP0C7W9 464 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 FAM90A24PP0C7X0 464 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 FSTP19883 344 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 HOXD3P31249 432 aaPredicted RBP12.89□□□□□ -0.35
DDX55-212ENST00000544738 UTF1Q5T230 341 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 ATAD3CQ5T2N8 411 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 CDH26Q8IXH8 852 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 C8orf59Q8N0T1 100 aaPredicted RBP12.89□□□□□ -0.35
DDX55-212ENST00000544738 OR8H3Q8N146 312 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 ZNF485Q8NCK3 441 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 OR4X2Q8NGF9 303 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 OR13C5Q8NGS8 318 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 GGHQ92820 318 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 SPACA1Q9HBV2 294 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 CNOT2Q9NZN8 540 aaKnown RBP12.89□□□□□ -0.35
DDX55-212ENST00000544738 MOB4Q9Y3A3 225 aa12.89□□□□□ -0.35
DDX55-212ENST00000544738 IGHV3-7P01780 117 aa12.88□□□□□ -0.35
DDX55-212ENST00000544738 AMY1AP04745 511 aa12.88□□□□□ -0.35
DDX55-212ENST00000544738 AMY2AP04746 511 aa12.88□□□□□ -0.35
DDX55-212ENST00000544738 PF4V1P10720 104 aa12.88□□□□□ -0.35
DDX55-212ENST00000544738 SSTR5P35346 364 aa12.88□□□□□ -0.35
DDX55-212ENST00000544738 RPS11P62280 158 aaKnown RBP eCLIP12.88□□□□□ -0.35
DDX55-212ENST00000544738 SLC35A2P78381 396 aa12.88□□□□□ -0.35
DDX55-212ENST00000544738 LTC4SQ16873 150 aa12.88□□□□□ -0.35
DDX55-212ENST00000544738 SLC22A6Q4U2R8 563 aa12.88□□□□□ -0.35
DDX55-212ENST00000544738 STX19Q8N4C7 294 aa12.88□□□□□ -0.35
DDX55-212ENST00000544738 OR52M1Q8NGK5 317 aa12.88□□□□□ -0.35
DDX55-212ENST00000544738 OR10X1Q8NGY0 326 aa12.88□□□□□ -0.35
DDX55-212ENST00000544738 NEK7Q8TDX7 302 aa12.88□□□□□ -0.35
DDX55-212ENST00000544738 THRSPQ92748 146 aa12.88□□□□□ -0.35
DDX55-212ENST00000544738 LEAP2Q969E1 77 aa12.88□□□□□ -0.35
DDX55-212ENST00000544738 ORAI1Q96D31 301 aa12.88□□□□□ -0.35
DDX55-212ENST00000544738 MRPS24Q96EL2 167 aaKnown RBP12.88□□□□□ -0.35
DDX55-212ENST00000544738 PGLYRP3Q96LB9 341 aa12.88□□□□□ -0.35
DDX55-212ENST00000544738 TSSC4Q9Y5U2 329 aaPredicted RBP12.88□□□□□ -0.35
DDX55-212ENST00000544738 TCRBV4S1A1TA0A5B7 111 aa12.87□□□□□ -0.35
DDX55-212ENST00000544738 ORC5O43913 435 aa12.87□□□□□ -0.35
DDX55-212ENST00000544738 CD1AP06126 327 aa12.87□□□□□ -0.35
DDX55-212ENST00000544738 SNRNP70P08621 437 aaKnown RBP12.87□□□□□ -0.35
DDX55-212ENST00000544738 CAPGP40121 348 aa12.87□□□□□ -0.35
DDX55-212ENST00000544738 GNG10P50151 68 aa12.87□□□□□ -0.35
DDX55-212ENST00000544738 HES1Q14469 280 aa12.87□□□□□ -0.35
DDX55-212ENST00000544738 RCN1Q15293 331 aa12.87□□□□□ -0.35
DDX55-212ENST00000544738 C9orf152Q5JTZ5 239 aa12.87□□□□□ -0.35
DDX55-212ENST00000544738 JAGN1Q8N5M9 183 aa12.87□□□□□ -0.35
DDX55-212ENST00000544738 DRAM1Q8N682 238 aa12.87□□□□□ -0.35
DDX55-212ENST00000544738 ZFP41Q8N8Y5 198 aa12.87□□□□□ -0.35
DDX55-212ENST00000544738 OR56B4Q8NH76 319 aa12.87□□□□□ -0.35
DDX55-212ENST00000544738 ARL11Q969Q4 196 aa12.87□□□□□ -0.35
DDX55-212ENST00000544738 OR14A2Q96R54 314 aa12.87□□□□□ -0.35
DDX55-212ENST00000544738 RAB9BQ9NP90 201 aa12.87□□□□□ -0.35
DDX55-212ENST00000544738 PLCXD1Q9NUJ7 323 aa12.87□□□□□ -0.35
DDX55-212ENST00000544738 GAR1Q9NY12 217 aaKnown RBP12.87□□□□□ -0.35
DDX55-212ENST00000544738 ZNF581Q9P0T4 197 aa12.87□□□□□ -0.35
DDX55-212ENST00000544738 TRAV8-7A0A075B6U6 113 aa12.86□□□□□ -0.35
DDX55-212ENST00000544738 TRBV5-7A0A0A0MS05 114 aa12.86□□□□□ -0.35
DDX55-212ENST00000544738 TRAV39A0A0B4J263 110 aa12.86□□□□□ -0.35
DDX55-212ENST00000544738 A0A1W2PPI3 338 aa12.86□□□□□ -0.35
DDX55-212ENST00000544738 MCRIP1C9JLW8 97 aa12.86□□□□□ -0.35
DDX55-212ENST00000544738 MYL12BO14950 172 aa12.86□□□□□ -0.35
DDX55-212ENST00000544738 FGF16O43320 207 aa12.86□□□□□ -0.35
DDX55-212ENST00000544738 PF4P02776 101 aa12.86□□□□□ -0.35
DDX55-212ENST00000544738 GAPDHP04406 335 aaKnown RBP12.86□□□□□ -0.35
DDX55-212ENST00000544738 NHLRC4P0CG21 123 aaPredicted RBP12.86□□□□□ -0.35
DDX55-212ENST00000544738 TMEM11P17152 192 aa12.86□□□□□ -0.35
DDX55-212ENST00000544738 WNT4P56705 351 aa12.86□□□□□ -0.35
DDX55-212ENST00000544738 C8orf31Q8N9H6 132 aa12.86□□□□□ -0.35
DDX55-212ENST00000544738 RCC1LQ96I51 464 aaKnown RBP12.86□□□□□ -0.35
DDX55-212ENST00000544738 PSORS1C1Q9UIG5 152 aa12.86□□□□□ -0.35
DDX55-212ENST00000544738 MRPS28Q9Y2Q9 187 aaKnown RBP12.86□□□□□ -0.35
DDX55-212ENST00000544738 STAB2Q8WWQ8 2551 aa12.86□□□□□ -0.35
DDX55-212ENST00000544738 FAM90A10PA6NDY2 464 aa12.85□□□□□ -0.35
DDX55-212ENST00000544738 FAM90A7PA6NKC0 464 aa12.85□□□□□ -0.35
DDX55-212ENST00000544738 FAM90A23PA8MXZ1 464 aa12.85□□□□□ -0.35
DDX55-212ENST00000544738 AIPO00170 330 aa12.85□□□□□ -0.35
DDX55-212ENST00000544738 SDCBPO00560 298 aaPredicted RBP12.85□□□□□ -0.35
DDX55-212ENST00000544738 MT-ND4P03905 459 aa12.85□□□□□ -0.35
DDX55-212ENST00000544738 CELP19835 753 aa12.85□□□□□ -0.35
DDX55-212ENST00000544738 MAPK3P27361 379 aaPredicted RBP12.85□□□□□ -0.35
DDX55-212ENST00000544738 ZNF816Q0VGE8 651 aaPredicted RBP12.85□□□□□ -0.35
DDX55-212ENST00000544738 Q3ZCU0 254 aa12.85□□□□□ -0.35
DDX55-212ENST00000544738 TCTEX1D4Q5JR98 221 aa12.85□□□□□ -0.35
DDX55-212ENST00000544738 OGFRL1Q5TC84 451 aaPredicted RBP12.85□□□□□ -0.35
DDX55-212ENST00000544738 GLIPR1L1Q6UWM5 242 aa12.85□□□□□ -0.35
DDX55-212ENST00000544738 ZNF497Q6ZNH5 498 aa12.85□□□□□ -0.35
DDX55-212ENST00000544738 MYDGFQ969H8 173 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms