RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 AP3S1Q92572 193 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 CORO2AQ92828 525 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 RAB3CQ96E17 227 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 C18orf12Q96KH6 178 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 NCOR1P1Q9H4R4 102 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 SPACA1Q9HBV2 294 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 OPN4Q9UHM6 478 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 AK3Q9UIJ7 227 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 INSIG2Q9Y5U4 225 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 TRBV23-1A0A0A0MS06 115 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 TRBV6-6A0A0A6YYG2 114 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 A0A0A6YYH2 397 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 IGHV2-70DA0A0C4DH43 119 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 A6NJ64 397 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 B4DSR2 109 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 FOXH1O75593 365 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 MMP23AO75900 390 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 CRYZL1O95825 349 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 ECDO95905 644 aaPredicted RBP8.78□□□□□ -1
NPIPB3-210ENST00000542817 MMP9P14780 707 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 CCL3L1P16619 93 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 ZNF16P17020 682 aaPredicted RBP8.78□□□□□ -1
NPIPB3-210ENST00000542817 RPL31P62899 125 aaKnown RBP8.78□□□□□ -1
NPIPB3-210ENST00000542817 EDDM3AQ14507 147 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 CDNFQ49AH0 187 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 KRBOX4Q5JUW0 171 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 IDO2Q6ZQW0 420 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 SNX29P2Q8IUI4 249 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 TCTE3Q8IZS6 198 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 OR13A1Q8NGR1 328 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 SUN5Q8TC36 379 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 GCDHQ92947 438 aaPredicted RBP8.78□□□□□ -1
NPIPB3-210ENST00000542817 SDHCQ99643 169 aaPredicted RBP8.78□□□□□ -1
NPIPB3-210ENST00000542817 AUNIPQ9H7T9 357 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 LINC00574Q9H8X3 128 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 MBNL3Q9NUK0 354 aaKnown RBP8.78□□□□□ -1
NPIPB3-210ENST00000542817 PLEKHJ1Q9NW61 149 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 KIF25Q9UIL4 384 aa8.78□□□□□ -1
NPIPB3-210ENST00000542817 SETD2Q9BYW2 2564 aaPredicted RBP8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 TRAV18A0A075B6X5 111 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 LOC105371267A0A1B0GV96 52 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 METTL21EPA6NDL7 271 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 TMEM235A6NFC5 223 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 MCRIP1C9JLW8 97 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 C15orf65H3BRN8 121 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 RCC1P18754 421 aaPredicted RBP8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 PTBP1P26599 531 aaKnown RBP eCLIP8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 TNFSF8P32971 234 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 GDNFP39905 211 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 MNDAP41218 407 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 GZMKP49863 264 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 AP2S1P53680 142 aaPredicted RBP8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 DVL1P1P54792 670 aaPredicted RBP8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 DLX1P56177 255 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 TAS2R20P59543 309 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 MRPS15P82914 257 aaKnown RBP8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 MEF2CQ06413 473 aaPredicted RBP8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 MADCAM1Q13477 382 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 ASAH1Q13510 395 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 HACD4Q5VWC8 232 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 CYB5R2Q6BCY4 276 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 HCP5Q6MZN7 132 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 FAM53AQ6NSI3 398 aaPredicted RBP8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 CNIH2Q6PI25 160 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 TNFRSF14Q92956 283 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 TMEM186Q96B77 213 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 NEDD4LQ96PU5 975 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 ABHD1Q96SE0 405 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 ARPC5LQ9BPX5 153 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 TMPRSS13Q9BYE2 586 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 SIRPDQ9H106 197 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 GSX1Q9H4S2 264 aaPredicted RBP8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 HIF1ANQ9NWT6 349 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 ING3Q9NXR8 418 aa8.77□□□□□ -1.01
NPIPB3-210ENST00000542817 HIVEP2P31629 2446 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 IGKV1D-8A0A087WSZ0 117 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 TRAV20A0A0B4J274 112 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 TMEM30CPA0ZSE6 113 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 MEIOCA2RUB1 952 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 C17orf98A8MV24 154 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 NPIPB11E5RHQ5 1161 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 CD5LO43866 347 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 CA11O75493 328 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 LY6G6DO95868 133 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 TGFAP01135 160 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 HEXAP06865 529 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 GSTP1P09211 210 aaKnown RBP8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 PPIAL4GP0DN37 164 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 IL7P13232 177 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 CD99P14209 185 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 FOSL1P15407 271 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 EDDM3BP56851 147 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 RAB25P57735 213 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 GUCA2AQ02747 115 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 CD276Q5ZPR3 534 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 MZT2AQ6P582 158 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 BAIAP2L2Q6UXY1 529 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 OR4K15Q8NH41 348 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 PPP1R35Q8TAP8 253 aa8.76□□□□□ -1.01
NPIPB3-210ENST00000542817 ZFAND1Q8TCF1 268 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms