RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 TMEM187Q14656 261 aa12.65□□□□□ -0.38
DDX55-209ENST00000542286 ASCL4Q6XD76 172 aa12.65□□□□□ -0.38
DDX55-209ENST00000542286 C20orf204Q6ZNR8 217 aa12.65□□□□□ -0.38
DDX55-209ENST00000542286 NAA60Q9H7X0 242 aa12.65□□□□□ -0.38
DDX55-209ENST00000542286 B4GALT7Q9UBV7 327 aa12.65□□□□□ -0.38
DDX55-209ENST00000542286 HSF4Q9ULV5 492 aa12.65□□□□□ -0.38
DDX55-209ENST00000542286 CADP27708 2225 aa12.65□□□□□ -0.38
DDX55-209ENST00000542286 K7EPK0 472 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 RHBDL1O75783 438 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 C1QL1O75973 258 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 WNT5AP41221 380 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 TMEM33P57088 247 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 ERVS71-1P61550 626 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 RPS23P62266 143 aaKnown RBP12.64□□□□□ -0.39
DDX55-209ENST00000542286 SPIN3Q5JUX0 258 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 OR2T2Q6IF00 324 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 FAM71E2Q8N5Q1 922 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 RDH5Q92781 318 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 REPIN1Q9BWE0 567 aaKnown RBP12.64□□□□□ -0.39
DDX55-209ENST00000542286 KCNJ16Q9NPI9 418 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 PIEZO2Q9H5I5 2752 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 RRP8O43159 456 aaKnown RBP12.64□□□□□ -0.39
DDX55-209ENST00000542286 OR13C7P0DN81 318 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 FUT3P21217 361 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 MAS1LP35410 378 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 TAS2R60P59551 318 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 UNQ6494/PRO21346Q6UXR6 183 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 BEND4Q6ZU67 534 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 REC114Q7Z4M0 266 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 ZNF286AQ9HBT8 521 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 FAM212BQ9NTI7 297 aaPredicted RBP12.64□□□□□ -0.39
DDX55-209ENST00000542286 ZDHHC8Q9ULC8 765 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 MMP24Q9Y5R2 645 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 TNRC6AQ8NDV7 1962 aaKnown RBP12.64□□□□□ -0.39
DDX55-209ENST00000542286 IGKV3D-15A0A087WSY6 115 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 IGKV1D-13A0A0B4J2D9 117 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 IGKV1-13P0DP09 117 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 UBAC2Q8NBM4 344 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 SPRR3Q9UBC9 169 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 FBXO7Q9Y3I1 522 aa12.64□□□□□ -0.39
DDX55-209ENST00000542286 SP1P08047 785 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 CA6P23280 308 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 NHLH2Q02577 135 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 GAMTQ14353 236 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 HERPUD1Q15011 391 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 SURF2Q15527 256 aaPredicted RBP12.63□□□□□ -0.39
DDX55-209ENST00000542286 SSX2Q16385 188 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 COLCA1Q6ZS62 124 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 MCEMP1Q8IX19 187 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 SPSB4Q96A44 273 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 TMEM45BQ96B21 275 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 YPEL4Q96NS1 127 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 PRRX2Q99811 253 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 ZPBPQ9BS86 351 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 PRDM14Q9GZV8 571 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 MAGT1Q9H0U3 335 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 WFDC1Q9HC57 220 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 PUS1Q9Y606 427 aaKnown RBP eCLIP12.63□□□□□ -0.39
DDX55-209ENST00000542286 HSD17B6O14756 317 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 DEDDO75618 318 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 IL18BPO95998 194 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 GAPDHP04406 335 aaKnown RBP12.63□□□□□ -0.39
DDX55-209ENST00000542286 DDTP30046 118 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 EIF3IQ13347 325 aaKnown RBP12.63□□□□□ -0.39
DDX55-209ENST00000542286 PRR18Q8N4B5 295 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 COMMD1Q8N668 190 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 SLC35G3Q8N808 338 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 SLC35B3Q9H1N7 401 aa12.63□□□□□ -0.39
DDX55-209ENST00000542286 PPYP01298 95 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 IFNA21P01568 189 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 DTYMKP23919 212 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 ARL6IP1Q15041 203 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 ALKBH6Q3KRA9 238 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 PDZD11Q5EBL8 140 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 CCDC54Q8NEL0 328 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 POM121L2Q96KW2 1035 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 SSX3Q99909 188 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 SH3BGRL3Q9H299 93 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 PRO1933Q9H354 126 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 ZNF292O60281 2723 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 ADGRG4Q8IZF6 3080 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 KMT2EQ8IZD2 1858 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 A0A087X0M5 115 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 IGKV1-6A0A0C4DH72 117 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 A0A1B0GX30 115 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 UCP2P55851 309 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 IZUMO4Q1ZYL8 232 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 SPNS3Q6ZMD2 512 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 ZDHHC23Q8IYP9 409 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 RNASE11Q8TAA1 199 aaKnown RBP12.62□□□□□ -0.39
DDX55-209ENST00000542286 MSI2Q96DH6 328 aaKnown RBP12.62□□□□□ -0.39
DDX55-209ENST00000542286 DCAF16Q9NXF7 216 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 MEMO1Q9Y316 297 aa12.62□□□□□ -0.39
DDX55-209ENST00000542286 CD300LBA8K4G0 201 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 CA11O75493 328 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 TFF1P04155 84 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 OMGP23515 440 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 GNRHRP30968 328 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 CAMLGP49069 296 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 HERV-K104P61576 105 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms