RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 USP24Q9UPU5 2620 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 C3orf85A0A1B0GTC6 90 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 C7orf77A4D0Y5 90 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 TRDCB7Z8K6 153 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 NGFP01138 241 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 SMIM6P0DI80 62 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 HABP2Q14520 560 aaPredicted RBP9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 PHLDA2Q53GA4 152 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 DPPA2Q7Z7J5 298 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 OR1K1Q8NGR3 316 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 HIST1H2BAQ96A08 127 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 MALSU1Q96EH3 234 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 GMPPAQ96IJ6 420 aaPredicted RBP9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 SCRT1Q9BWW7 348 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 TMEM222Q9H0R3 208 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 ZNF442Q9H7R0 627 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 PLEKHF2Q9H8W4 249 aa9.43□□□□□ -0.9
SH3RF1-203ENST00000508685 IGKV1-12A0A0C4DH73 117 aa9.42□□□□□ -0.9
SH3RF1-203ENST00000508685 SS18L1O75177 396 aaPredicted RBP9.42□□□□□ -0.9
SH3RF1-203ENST00000508685 PPYP01298 95 aa9.42□□□□□ -0.9
SH3RF1-203ENST00000508685 IGKV1D-12P01611 117 aa9.42□□□□□ -0.9
SH3RF1-203ENST00000508685 AGAP20933 346 aa9.42□□□□□ -0.9
SH3RF1-203ENST00000508685 PLCXD3Q63HM9 321 aa9.42□□□□□ -0.9
SH3RF1-203ENST00000508685 RP1L1Q8IWN7 2480 aaPredicted RBP9.42□□□□□ -0.9
SH3RF1-203ENST00000508685 OR2C3Q8N628 320 aa9.42□□□□□ -0.9
SH3RF1-203ENST00000508685 OR5L1Q8NGL2 311 aa9.42□□□□□ -0.9
SH3RF1-203ENST00000508685 PIGCQ92535 297 aa9.42□□□□□ -0.9
SH3RF1-203ENST00000508685 GNPNAT1Q96EK6 184 aaPredicted RBP9.42□□□□□ -0.9
SH3RF1-203ENST00000508685 BOD1Q96IK1 185 aa9.42□□□□□ -0.9
SH3RF1-203ENST00000508685 CLCC1Q96S66 551 aa9.42□□□□□ -0.9
SH3RF1-203ENST00000508685 PAPOLGQ9BWT3 736 aaKnown RBP9.42□□□□□ -0.9
SH3RF1-203ENST00000508685 RIMS4Q9H426 269 aaPredicted RBP9.42□□□□□ -0.9
SH3RF1-203ENST00000508685 SPACA1Q9HBV2 294 aa9.42□□□□□ -0.9
SH3RF1-203ENST00000508685 WFDC1Q9HC57 220 aa9.42□□□□□ -0.9
SH3RF1-203ENST00000508685 CRIM1Q9NZV1 1036 aa9.42□□□□□ -0.9
SH3RF1-203ENST00000508685 RCL1Q9Y2P8 373 aaKnown RBP9.42□□□□□ -0.9
SH3RF1-203ENST00000508685 A0A1W2PR80 420 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 CLEC18AA5D8T8 446 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 C5orf52A6NGY3 159 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 K7EM74 188 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 UBE2CO00762 179 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 PITX3O75364 302 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 TK1P04183 234 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 AADACP22760 399 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 MAS1LP35410 378 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 ARR3P36575 388 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 NKX2-1P43699 371 aaPredicted RBP9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 EWSR1Q01844 656 aaKnown RBP eCLIP9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 BAXQ07812 192 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 EIF2S3LQ2VIR3 472 aaKnown RBP9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 PIGYQ3MUY2 71 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 AWAT1Q58HT5 328 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 DPPA3Q6W0C5 159 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 ZNF695Q8IW36 515 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 ZADH2Q8N4Q0 377 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 ZNF565Q8N9K5 539 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 CLEC18CQ8NCF0 446 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 GTF3AQ92664 365 aaKnown RBP9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 IL22RA2Q969J5 263 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 POM121L2Q96KW2 1035 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 OR51B6Q9H340 312 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 GP6Q9HCN6 339 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 ZNF581Q9P0T4 197 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 UBE2J1Q9Y385 318 aaPredicted RBP9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 SMG1Q96Q15 3661 aaKnown RBP9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 KIR2DS1A0A191URI9 304 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 M0R036 132 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 AQP7O14520 342 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 SNRNP70P08621 437 aaKnown RBP9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 ZNF44P15621 663 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 S100GP29377 79 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 KIR2DS4P43632 304 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 RAB2AP61019 212 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 VAMP2P63027 116 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 CLINT1Q14677 625 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 KIR2DS1Q14954 304 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 FAM214BQ7L5A3 538 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 MDP1Q86V88 176 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 MYPOPQ86VE0 399 aaPredicted RBP9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 SLC35G3Q8N808 338 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 CNEP1R1Q8N9A8 125 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 OR56B2PQ8NGI1 322 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 OR52M1Q8NGK5 317 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 C2CD4CQ8TF44 421 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 HPSE2Q8WWQ2 592 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 BCL2L2Q92843 193 aaPredicted RBP9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 HIPK2Q9H2X6 1198 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 C11orf1Q9H5F2 150 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 METTL1Q9UBP6 276 aaKnown RBP9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 RAXQ9Y2V3 346 aa9.41□□□□□ -0.9
SH3RF1-203ENST00000508685 K7N7A8 449 aa9.4□□□□□ -0.9
SH3RF1-203ENST00000508685 LYZL6O75951 148 aa9.4□□□□□ -0.9
SH3RF1-203ENST00000508685 COX5BP10606 129 aa9.4□□□□□ -0.9
SH3RF1-203ENST00000508685 WNT5AP41221 380 aa9.4□□□□□ -0.9
SH3RF1-203ENST00000508685 MPV17LQ2QL34 196 aa9.4□□□□□ -0.9
SH3RF1-203ENST00000508685 VWA1Q6PCB0 445 aa9.4□□□□□ -0.9
SH3RF1-203ENST00000508685 LINC00596Q86U02 117 aa9.4□□□□□ -0.9
SH3RF1-203ENST00000508685 C1QL4Q86Z23 238 aa9.4□□□□□ -0.9
SH3RF1-203ENST00000508685 BATF2Q8N1L9 274 aa9.4□□□□□ -0.9
SH3RF1-203ENST00000508685 C9orf106Q8NAJ2 232 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms