RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 RPL19P84098 196 aaKnown RBP6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 POU3F1Q03052 451 aaPredicted RBP6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 ARL16Q0P5N6 197 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 VAX1Q5SQQ9 334 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 KLHL24Q6TFL4 600 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 SHISA6Q6ZSJ9 500 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 ZNF695Q8IW36 515 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 MFSD9Q8NBP5 474 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 OR51H1Q8NH63 302 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 SGMS2Q8NHU3 365 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 C1orf147Q96MC9 270 aaPredicted RBP6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 PCBD2Q9H0N5 130 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 PARLQ9H300 379 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 CST9LQ9H4G1 147 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 ZNF286AQ9HBT8 521 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 PNO1Q9NRX1 252 aaKnown RBP6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 RYDENQ9NUL5 291 aaKnown RBP6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 IGLV1-36A0A0B4J1U3 117 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 B4DEV8 164 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 G3V3Y1 287 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 PAGE4O60829 102 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 TMEM127O75204 238 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 BPNT1O95861 308 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 CCKARP32238 428 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 SCAND1P57086 179 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 LINC00310P59036 64 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 SHHQ15465 462 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 PIGYQ3MUY2 71 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 OCIAD2Q56VL3 154 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 ATG4DQ86TL0 474 aaPredicted RBP6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 LYPD6Q86Y78 171 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 SCGB3A2Q96PL1 93 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 NAA60Q9H7X0 242 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 NCOA6Q14686 2063 aaPredicted RBP6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 PCDH15Q96QU1 1955 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 GYPAP02724 150 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 HNRNPA2B1P22626 353 aaKnown RBP6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 P2RY2P41231 377 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 ZNF83P51522 516 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 BIDP55957 195 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 FBXW4P57775 412 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 ZNF266Q14584 549 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 KISS1Q15726 138 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 SMIM15Q7Z3B0 74 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 NRSN1Q8IZ57 195 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 OR10V1Q8NGI7 309 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 IFI44Q8TCB0 444 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 ABHD3Q8WU67 409 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 C11orf40Q8WZ69 217 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 FAM131CQ96AQ9 280 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 GPR34Q9UPC5 381 aa6.27□□□□□ -1.41
LIMCH1-207ENST00000508466 ANAPC1Q9H1A4 1944 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 NUP210Q8TEM1 1887 aaPredicted RBP6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 SMG1Q96Q15 3661 aaKnown RBP6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 A0A1W2PP55 124 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 M0R296 226 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 CYR61O00622 381 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 IGKV1D-33P01593 117 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 IGKV1-33P01594 117 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 SOD2P04179 222 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 CISD3P0C7P0 127 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 CSF2RAP15509 400 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 AADACP22760 399 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 MPLP40238 635 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 IER3P46695 156 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 ZNF121P58317 390 aaPredicted RBP6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 TAS2R30P59541 319 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 SELENOVP59797 346 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 RPL27P61353 136 aaKnown RBP6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 ZNF117Q03924 483 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 ARHGAP19Q14CB8 494 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 GCSAMLQ5JQS6 135 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 ACTL10Q5JWF8 245 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 DNLZQ5SXM8 178 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 PRAMEF20Q5VT98 475 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 ZNF738Q8NE65 137 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 OR5L2Q8NGL0 311 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 OR2AE1Q8NHA4 323 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 MRPL30Q8TCC3 161 aaKnown RBP6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 SLC46A1Q96NT5 459 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 OR2A5Q96R48 311 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 CCDC3Q9BQI4 270 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 SLC39A9Q9NUM3 307 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 PILRAQ9UKJ1 303 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 NUP210LQ5VU65 1888 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 A0A0G2JRQ6 117 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 FBLL1A6NHQ2 334 aaKnown RBP6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 ZNF814B7Z6K7 855 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 NKX2-2O95096 273 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 NAPSAO96009 420 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 HRASP01112 189 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 PNMTP11086 282 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 ZNF17P17021 662 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 AMTP48728 403 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 SUCLG1P53597 346 aaKnown RBP6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 SPANXN5Q5MJ07 72 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 LIAT1Q6ZQX7 453 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 HAPLN4Q86UW8 402 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 OR5AU1Q8NGC0 362 aa6.26□□□□□ -1.41
LIMCH1-207ENST00000508466 OR5P3Q8WZ94 311 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms