RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 DDA1Q9BW61 102 aa15.23■□□□□ 0.03
NUP54-205ENST00000507257 ZNF816-ZNF321PA0A0X1KG74 233 aa15.23■□□□□ 0.03
NUP54-205ENST00000507257 TP53I11O14683 189 aa15.23■□□□□ 0.03
NUP54-205ENST00000507257 ATXN7O15265 892 aaPredicted RBP15.23■□□□□ 0.03
NUP54-205ENST00000507257 DNPH1O43598 174 aa15.23■□□□□ 0.03
NUP54-205ENST00000507257 MDH2P40926 338 aaKnown RBP15.23■□□□□ 0.03
NUP54-205ENST00000507257 NCR3LG1Q68D85 454 aa15.23■□□□□ 0.03
NUP54-205ENST00000507257 SAXO1Q8IYX7 474 aa15.23■□□□□ 0.03
NUP54-205ENST00000507257 ZIC4Q8N9L1 334 aa15.23■□□□□ 0.03
NUP54-205ENST00000507257 OR51G1Q8NGK1 321 aa15.23■□□□□ 0.03
NUP54-205ENST00000507257 SF3B5Q9BWJ5 86 aaKnown RBP15.23■□□□□ 0.03
NUP54-205ENST00000507257 PPP1R14DQ9NXH3 145 aa15.23■□□□□ 0.03
NUP54-205ENST00000507257 CHCHD2Q9Y6H1 151 aaPredicted RBP15.23■□□□□ 0.03
NUP54-205ENST00000507257 KIAA1549Q9HCM3 1950 aa15.22■□□□□ 0.03
NUP54-205ENST00000507257 TMEM250H0YL14 139 aa15.22■□□□□ 0.03
NUP54-205ENST00000507257 OR7C1O76099 320 aaPredicted RBP15.22■□□□□ 0.03
NUP54-205ENST00000507257 CNOT4O95628 575 aaKnown RBP15.22■□□□□ 0.03
NUP54-205ENST00000507257 IL18BPO95998 194 aa15.22■□□□□ 0.03
NUP54-205ENST00000507257 CYC1P08574 325 aa15.22■□□□□ 0.03
NUP54-205ENST00000507257 S100GP29377 79 aa15.22■□□□□ 0.03
NUP54-205ENST00000507257 CCKARP32238 428 aa15.22■□□□□ 0.03
NUP54-205ENST00000507257 ZNF92Q03936 586 aa15.22■□□□□ 0.03
NUP54-205ENST00000507257 CLN3Q13286 438 aa15.22■□□□□ 0.03
NUP54-205ENST00000507257 RSPO4Q2I0M5 234 aaPredicted RBP15.22■□□□□ 0.03
NUP54-205ENST00000507257 LRRC75BQ2VPJ9 315 aa15.22■□□□□ 0.03
NUP54-205ENST00000507257 TMEM41BQ5BJD5 291 aa15.22■□□□□ 0.03
NUP54-205ENST00000507257 ZNF880Q6PDB4 577 aa15.22■□□□□ 0.03
NUP54-205ENST00000507257 TGIF2LXQ8IUE1 241 aa15.22■□□□□ 0.03
NUP54-205ENST00000507257 NAT6Q93015 286 aa15.22■□□□□ 0.03
NUP54-205ENST00000507257 ADGRG7Q96K78 797 aa15.22■□□□□ 0.03
NUP54-205ENST00000507257 HIST1H2AAQ96QV6 131 aa15.22■□□□□ 0.03
NUP54-205ENST00000507257 RTTNQ86VV8 2226 aa15.22■□□□□ 0.03
NUP54-205ENST00000507257 IGKV1D-13A0A0B4J2D9 117 aa15.21■□□□□ 0.03
NUP54-205ENST00000507257 TOX3O15405 576 aaPredicted RBP15.21■□□□□ 0.03
NUP54-205ENST00000507257 KBTBD11O94819 623 aa15.21■□□□□ 0.03
NUP54-205ENST00000507257 TYMSP04818 313 aa15.21■□□□□ 0.03
NUP54-205ENST00000507257 IGKV1-13P0DP09 117 aa15.21■□□□□ 0.03
NUP54-205ENST00000507257 GLB1P16278 677 aa15.21■□□□□ 0.03
NUP54-205ENST00000507257 F2RP25116 425 aa15.21■□□□□ 0.03
NUP54-205ENST00000507257 ACOT6Q3I5F7 207 aaPredicted RBP15.21■□□□□ 0.03
NUP54-205ENST00000507257 ZNF525Q8N782 197 aa15.21■□□□□ 0.03
NUP54-205ENST00000507257 LSM10Q969L4 123 aaKnown RBP15.21■□□□□ 0.03
NUP54-205ENST00000507257 PRSS50Q9UI38 385 aa15.21■□□□□ 0.03
NUP54-205ENST00000507257 UNC80Q8N2C7 3258 aa15.21■□□□□ 0.03
NUP54-205ENST00000507257 A0A1B0GWJ7 208 aa15.21■□□□□ 0.02
NUP54-205ENST00000507257 XKRY2A2RUG3 117 aa15.21■□□□□ 0.02
NUP54-205ENST00000507257 LRP5LA4QPB2 252 aa15.21■□□□□ 0.02
NUP54-205ENST00000507257 PPP5D1E7EU14 171 aa15.21■□□□□ 0.02
NUP54-205ENST00000507257 PGLYRP1O75594 196 aaPredicted RBP15.21■□□□□ 0.02
NUP54-205ENST00000507257 NXPH1P58417 271 aa15.21■□□□□ 0.02
NUP54-205ENST00000507257 PRDX4Q13162 271 aa15.21■□□□□ 0.02
NUP54-205ENST00000507257 HERPUD1Q15011 391 aa15.21■□□□□ 0.02
NUP54-205ENST00000507257 TMEM241Q24JQ0 296 aa15.21■□□□□ 0.02
NUP54-205ENST00000507257 PLCXD3Q63HM9 321 aa15.21■□□□□ 0.02
NUP54-205ENST00000507257 ZNF774Q6NX45 483 aa15.21■□□□□ 0.02
NUP54-205ENST00000507257 LCN15Q6UWW0 184 aa15.21■□□□□ 0.02
NUP54-205ENST00000507257 C16orf82Q7Z2V1 217 aa15.21■□□□□ 0.02
NUP54-205ENST00000507257 ZNF611Q8N823 705 aa15.21■□□□□ 0.02
NUP54-205ENST00000507257 SPSB4Q96A44 273 aa15.21■□□□□ 0.02
NUP54-205ENST00000507257 TMEM38BQ9NVV0 291 aa15.21■□□□□ 0.02
NUP54-205ENST00000507257 C19orf25Q9UFG5 118 aaPredicted RBP15.21■□□□□ 0.02
NUP54-205ENST00000507257 TIMM9Q9Y5J7 89 aa15.21■□□□□ 0.02
NUP54-205ENST00000507257 ATP23Q9Y6H3 246 aa15.21■□□□□ 0.02
NUP54-205ENST00000507257 CCDC85CA6NKD9 419 aa15.2■□□□□ 0.02
NUP54-205ENST00000507257 CEBPZOSA8MTT3 80 aa15.2■□□□□ 0.02
NUP54-205ENST00000507257 HOXA6P31267 233 aa15.2■□□□□ 0.02
NUP54-205ENST00000507257 USF2Q15853 346 aaPredicted RBP15.2■□□□□ 0.02
NUP54-205ENST00000507257 BSXQ3C1V8 233 aa15.2■□□□□ 0.02
NUP54-205ENST00000507257 CDCP2Q5VXM1 449 aa15.2■□□□□ 0.02
NUP54-205ENST00000507257 SYT13Q7L8C5 426 aa15.2■□□□□ 0.02
NUP54-205ENST00000507257 CPT1CQ8TCG5 803 aa15.2■□□□□ 0.02
NUP54-205ENST00000507257 TMEM18Q96B42 140 aa15.2■□□□□ 0.02
NUP54-205ENST00000507257 GPR146Q96CH1 333 aa15.2■□□□□ 0.02
NUP54-205ENST00000507257 ANAPC16Q96DE5 110 aa15.2■□□□□ 0.02
NUP54-205ENST00000507257 TMEM68Q96MH6 324 aa15.2■□□□□ 0.02
NUP54-205ENST00000507257 OR5B12Q96R08 314 aa15.2■□□□□ 0.02
NUP54-205ENST00000507257 SMIM7Q9BQ49 75 aa15.2■□□□□ 0.02
NUP54-205ENST00000507257 RSG1Q9BU20 258 aa15.2■□□□□ 0.02
NUP54-205ENST00000507257 REPIN1Q9BWE0 567 aaKnown RBP15.2■□□□□ 0.02
NUP54-205ENST00000507257 RIMS4Q9H426 269 aaPredicted RBP15.2■□□□□ 0.02
NUP54-205ENST00000507257 CCL28Q9NRJ3 127 aa15.2■□□□□ 0.02
NUP54-205ENST00000507257 TRBV6-6A0A0A6YYG2 114 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 MAP1LC3B2A6NCE7 125 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 SCTP09683 121 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 METTL15P1P0C7V9 234 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 HBG1P69891 147 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 HBG2P69892 147 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 IQCJQ1A5X6 159 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 ACTL10Q5JWF8 245 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 CALHM1Q8IU99 346 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 MAP1LC3BQ9GZQ8 125 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 PCED1AQ9H1Q7 454 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 GAB2Q9UQC2 676 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 UNC13CQ8NB66 2214 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 EPOPA6NHQ4 379 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 GGCTO75223 188 aaKnown RBP15.19■□□□□ 0.02
NUP54-205ENST00000507257 HRASP01112 189 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 HLA-HP01893 362 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 NUBP1P53384 320 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 FGF12P61328 243 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms