RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 ZNF436Q9C0F3 470 aaPredicted RBP2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 OR51B6Q9H340 312 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 ZSCAN16Q9H4T2 348 aaPredicted RBP2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 PSTPIP2Q9H939 334 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 HRASLSQ9HDD0 168 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 UBQLN4Q9NRR5 601 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 SETD1AO15047 1707 aaKnown RBP2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 ZCCHC11Q5TAX3 1644 aaKnown RBP2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 LTBP4Q8N2S1 1624 aa2.46□□□□□ -2.02
TRAPPC13-208ENST00000505553 TMEM210A6NLX4 147 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 TMEM250H0YL14 139 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 K7EPK0 472 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 M0QYV0 167 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 CXCR6O00574 342 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 CCNKO75909 580 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 ISG15P05161 165 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 ADORA1P30542 326 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 CDKN2CP42773 168 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 SMAGPQ0VAQ4 97 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 CDC20Q12834 499 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 SPIN4Q56A73 249 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 FAM104BQ5XKR9 115 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 PRSS54Q6PEW0 395 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 XKRXQ6PP77 449 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 SCGB1D4Q6XE38 83 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 ZNF101Q8IZC7 436 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 RIBC1Q8N443 379 aaPredicted RBP2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 OR5K1Q8NHB7 308 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 ASB13Q8WXK3 278 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 PPCDCQ96CD2 204 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 IL37Q9NZH6 218 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 TMEM216Q9P0N5 145 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 GLS2Q9UI32 602 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 RWDD2AQ9UIY3 292 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 C2orf16Q68DN1 1984 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 CLUHO75153 1309 aa2.45□□□□□ -2.02
TRAPPC13-208ENST00000505553 KIAA0556O60303 1618 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 F5H5T6 163 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 MAGEB4O15481 346 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 IL4P05112 153 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 CALB1P05937 261 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 LINC00614P0C842 121 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 CD28P10747 220 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 MLNP12872 115 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 GTF2F2P13984 249 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 GADD45AP24522 165 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 HAAOP46952 286 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 RAP1GDS1P52306 607 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 MP68P56378 58 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 ELF3P78545 371 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 C1DQ13901 141 aaKnown RBP2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 ZNF678Q5SXM1 525 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 TNFAIP8L2Q6P589 184 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 CD200R1LQ6Q8B3 271 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 IGFL2Q6UWQ7 119 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 Q8N7P7 452 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 SLC35G3Q8N808 338 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 SPANXA2-OT1Q8N9U9 137 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 OR2M3Q8NG83 312 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 ESR2Q92731 530 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 FRZBQ92765 325 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 TESCQ96BS2 214 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 C1orf50Q9BV19 199 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 MS4A6AQ9H2W1 248 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 IL20Q9NYY1 176 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 GUCA1BQ9UMX6 200 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 PTPRKQ15262 1439 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 LRP4O75096 1905 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 TTC37Q6PGP7 1564 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 ZNF646O15015 1829 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 ZNF318Q5VUA4 2279 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 ADAMTS9Q9P2N4 1935 aa2.44□□□□□ -2.02
TRAPPC13-208ENST00000505553 ZNF850A8MQ14 1090 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 BTNL10A8MVZ5 291 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 C21orf140B9A014 251 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 ACOX3O15254 700 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 TGOLN2O43493 480 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 ATRNO75882 1429 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 ARL6IP5O75915 188 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 DCTN3O75935 186 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 ATP5HO75947 161 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 DNAH10OSP0CZ25 163 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 ZNF7P17097 686 aaPredicted RBP2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 NTF3P20783 257 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 PSMA1P25786 263 aaKnown RBP2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 NPY1RP25929 384 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 HOXA6P31267 233 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 MPV17P39210 176 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 INPP1P49441 399 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 H2BFSP57053 126 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 RAB2AP61019 212 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 ZNF816Q0VGE8 651 aaPredicted RBP2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 STX5Q13190 355 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 TMEM241Q24JQ0 296 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 SP6Q3SY56 376 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 CENPWQ5EE01 88 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 SAPCD1Q5SSQ6 148 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 MRPL2Q5T653 305 aaKnown RBP2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
TRAPPC13-208ENST00000505553 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms