RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 RAB9BQ9NP90 201 aa20.35■□□□□ 0.85
PPP1R3F-205ENST00000495799 FAM172BPA6NC97 362 aa20.34■□□□□ 0.85
PPP1R3F-205ENST00000495799 NPIPB11E5RHQ5 1161 aa20.34■□□□□ 0.85
PPP1R3F-205ENST00000495799 SSNA1O43805 119 aa20.34■□□□□ 0.85
PPP1R3F-205ENST00000495799 OR4E1P0C645 316 aa20.34■□□□□ 0.85
PPP1R3F-205ENST00000495799 UCP3P55916 312 aa20.34■□□□□ 0.85
PPP1R3F-205ENST00000495799 P2RX3P56373 397 aa20.34■□□□□ 0.85
PPP1R3F-205ENST00000495799 SEC22CQ9BRL7 303 aa20.34■□□□□ 0.85
PPP1R3F-205ENST00000495799 OR6C3Q9NZP0 311 aa20.34■□□□□ 0.85
PPP1R3F-205ENST00000495799 RAI1Q7Z5J4 1906 aaPredicted RBP20.34■□□□□ 0.85
PPP1R3F-205ENST00000495799 TRBV6-7A0A0A0MS04 114 aa20.33■□□□□ 0.85
PPP1R3F-205ENST00000495799 ODAMA1E959 279 aa20.33■□□□□ 0.85
PPP1R3F-205ENST00000495799 PPYP01298 95 aa20.33■□□□□ 0.85
PPP1R3F-205ENST00000495799 ZNF728P0DKX0 622 aa20.33■□□□□ 0.85
PPP1R3F-205ENST00000495799 GLIPR1P48060 266 aa20.33■□□□□ 0.85
PPP1R3F-205ENST00000495799 HERPUD1Q15011 391 aa20.33■□□□□ 0.85
PPP1R3F-205ENST00000495799 LPCAT3Q6P1A2 487 aa20.33■□□□□ 0.85
PPP1R3F-205ENST00000495799 KIRREL1Q96J84 757 aa20.33■□□□□ 0.85
PPP1R3F-205ENST00000495799 ZNF69Q9UC07 566 aa20.33■□□□□ 0.85
PPP1R3F-205ENST00000495799 SPTBN1Q01082 2364 aaKnown RBP20.33■□□□□ 0.85
PPP1R3F-205ENST00000495799 SMG1Q96Q15 3661 aaKnown RBP20.33■□□□□ 0.84
PPP1R3F-205ENST00000495799 EPG5Q9HCE0 2579 aa20.33■□□□□ 0.84
PPP1R3F-205ENST00000495799 TMPRSS2O15393 492 aa20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 CCNKO75909 580 aa20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 CTSDP07339 412 aaPredicted RBP20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 GZMHP20718 246 aa20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 C11orf88Q6PI97 169 aa20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 ZNF565Q8N9K5 539 aa20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 ZNF431Q8TF32 576 aaPredicted RBP20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 GALMQ96C23 342 aa20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 FXYD6Q9H0Q3 95 aa20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 SLC23A1Q9UHI7 598 aa20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 TRAV39A0A0B4J263 110 aa20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 AADACP22760 399 aa20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 NFYAP23511 347 aaPredicted RBP20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 IL2RGP31785 369 aa20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 EDDM3BP56851 147 aa20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 TMEM128Q5BJH2 165 aa20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 SLC38A6Q8IZM9 456 aa20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 IL1F10Q8WWZ1 152 aa20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 TOMM40LQ969M1 308 aa20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 TMPRSS13Q9BYE2 586 aa20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 C5orf66Q9H5L9 145 aa20.32■□□□□ 0.84
PPP1R3F-205ENST00000495799 IGKV1-6A0A0C4DH72 117 aa20.31■□□□□ 0.84
PPP1R3F-205ENST00000495799 C12orf77C9JDV5 145 aa20.31■□□□□ 0.84
PPP1R3F-205ENST00000495799 SPINT2O43291 252 aa20.31■□□□□ 0.84
PPP1R3F-205ENST00000495799 HSPA12AO43301 675 aa20.31■□□□□ 0.84
PPP1R3F-205ENST00000495799 TUSC2O75896 110 aa20.31■□□□□ 0.84
PPP1R3F-205ENST00000495799 COL8A2P25067 703 aa20.31■□□□□ 0.84
PPP1R3F-205ENST00000495799 FXYD4P59646 89 aa20.31■□□□□ 0.84
PPP1R3F-205ENST00000495799 SRSF1Q07955 248 aaKnown RBP eCLIP20.31■□□□□ 0.84
PPP1R3F-205ENST00000495799 MUC20Q8N307 709 aaPredicted RBP20.31■□□□□ 0.84
PPP1R3F-205ENST00000495799 PRR18Q8N4B5 295 aa20.31■□□□□ 0.84
PPP1R3F-205ENST00000495799 FAM216BQ8N7L0 139 aa20.31■□□□□ 0.84
PPP1R3F-205ENST00000495799 MRGPRDQ8TDS7 321 aa20.31■□□□□ 0.84
PPP1R3F-205ENST00000495799 C14orf79Q96F83 325 aa20.31■□□□□ 0.84
PPP1R3F-205ENST00000495799 TIMD4Q96H15 378 aa20.31■□□□□ 0.84
PPP1R3F-205ENST00000495799 ZNF486Q96H40 463 aaPredicted RBP20.31■□□□□ 0.84
PPP1R3F-205ENST00000495799 LIME1Q9H400 295 aa20.31■□□□□ 0.84
PPP1R3F-205ENST00000495799 KAAG1Q9UBP8 84 aa20.31■□□□□ 0.84
PPP1R3F-205ENST00000495799 ROS1P08922 2347 aa20.31■□□□□ 0.84
PPP1R3F-205ENST00000495799 ADAM20O43506 726 aa20.3■□□□□ 0.84
PPP1R3F-205ENST00000495799 RP2O75695 350 aa20.3■□□□□ 0.84
PPP1R3F-205ENST00000495799 DAOP14920 347 aa20.3■□□□□ 0.84
PPP1R3F-205ENST00000495799 AKR1C4P17516 323 aa20.3■□□□□ 0.84
PPP1R3F-205ENST00000495799 BAMBIQ13145 260 aa20.3■□□□□ 0.84
PPP1R3F-205ENST00000495799 CR1LQ2VPA4 569 aa20.3■□□□□ 0.84
PPP1R3F-205ENST00000495799 ABCA11PQ4W5N1 156 aa20.3■□□□□ 0.84
PPP1R3F-205ENST00000495799 LYG2Q86SG7 212 aa20.3■□□□□ 0.84
PPP1R3F-205ENST00000495799 H1FOOQ8IZA3 346 aaPredicted RBP20.3■□□□□ 0.84
PPP1R3F-205ENST00000495799 OR13A1Q8NGR1 328 aa20.3■□□□□ 0.84
PPP1R3F-205ENST00000495799 CAPSLQ8WWF8 208 aa20.3■□□□□ 0.84
PPP1R3F-205ENST00000495799 CLEC4MQ9H2X3 399 aaPredicted RBP20.3■□□□□ 0.84
PPP1R3F-205ENST00000495799 SLC25A10Q9UBX3 287 aaPredicted RBP20.3■□□□□ 0.84
PPP1R3F-205ENST00000495799 PKDREJQ9NTG1 2253 aa20.29■□□□□ 0.84
PPP1R3F-205ENST00000495799 DSCAMO60469 2012 aa20.29■□□□□ 0.84
PPP1R3F-205ENST00000495799 NDUFB3O43676 98 aa20.29■□□□□ 0.84
PPP1R3F-205ENST00000495799 HLA-AP01891 365 aaKnown RBP20.29■□□□□ 0.84
PPP1R3F-205ENST00000495799 COX6B1P14854 86 aa20.29■□□□□ 0.84
PPP1R3F-205ENST00000495799 ZBTB25P24278 435 aa20.29■□□□□ 0.84
PPP1R3F-205ENST00000495799 LRRC10Q5BKY1 277 aa20.29■□□□□ 0.84
PPP1R3F-205ENST00000495799 TPRX1Q8N7U7 411 aa20.29■□□□□ 0.84
PPP1R3F-205ENST00000495799 TMEM246Q9BRR3 403 aa20.29■□□□□ 0.84
PPP1R3F-205ENST00000495799 RTBDNQ9BSG5 229 aaPredicted RBP20.29■□□□□ 0.84
PPP1R3F-205ENST00000495799 ZNF221Q9UK13 617 aa20.29■□□□□ 0.84
PPP1R3F-205ENST00000495799 OR2W1Q9Y3N9 320 aa20.29■□□□□ 0.84
PPP1R3F-205ENST00000495799 TRGV10A0A0A0MS01 117 aa20.28■□□□□ 0.84
PPP1R3F-205ENST00000495799 TNFRSF13BO14836 293 aaPredicted RBP20.28■□□□□ 0.84
PPP1R3F-205ENST00000495799 HBZP02008 142 aa20.28■□□□□ 0.84
PPP1R3F-205ENST00000495799 HNRNPCP07910 306 aaKnown RBP eCLIP20.28■□□□□ 0.84
PPP1R3F-205ENST00000495799 SELLP14151 372 aa20.28■□□□□ 0.84
PPP1R3F-205ENST00000495799 DHODHQ02127 395 aa20.28■□□□□ 0.84
PPP1R3F-205ENST00000495799 DHRS2Q13268 280 aa20.28■□□□□ 0.84
PPP1R3F-205ENST00000495799 CCDC71LQ8N9Z2 235 aa20.28■□□□□ 0.84
PPP1R3F-205ENST00000495799 ADAD2Q8NCV1 583 aaKnown RBP20.28■□□□□ 0.84
PPP1R3F-205ENST00000495799 OR52B4Q8NGK2 314 aa20.28■□□□□ 0.84
PPP1R3F-205ENST00000495799 RAB1CQ92928 201 aa20.28■□□□□ 0.84
PPP1R3F-205ENST00000495799 NINJ1Q92982 152 aa20.28■□□□□ 0.84
PPP1R3F-205ENST00000495799 ARL11Q969Q4 196 aa20.28■□□□□ 0.84
PPP1R3F-205ENST00000495799 LPAR3Q9UBY5 353 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms