RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 BSPH1Q075Z2 132 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 TESK1Q15569 626 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 NCMAPQ5T1S8 102 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 AADACL3Q5VUY0 350 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 ADAM5Q6NVV9 412 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 RTN4RL2Q86UN3 420 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 CMTM1Q8IZ96 169 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 C1orf87Q8N0U7 546 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 OR5D13Q8NGL4 314 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 MRPL30Q8TCC3 161 aaKnown RBP8.65□□□□□ -1.02
HDAC3-214ENST00000495485 CASTOR1Q8WTX7 329 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 LRRC29Q8WV35 223 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 MOB3AQ96BX8 217 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 OR2V2Q96R30 315 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 SUCNR1Q9BXA5 334 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 GON7Q9BXV9 100 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 TMPRSS13Q9BYE2 586 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 MRPL37Q9BZE1 423 aaKnown RBP8.65□□□□□ -1.02
HDAC3-214ENST00000495485 CHIAQ9BZP6 476 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 MS4A5Q9H3V2 200 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 RAB18Q9NP72 206 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 RNF7Q9UBF6 113 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 DPRXA6NFQ7 191 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 OOEPA6NGQ2 149 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 SRRM5B3KS81 715 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 HSPB6O14558 160 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 BET1O15155 118 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 SPRY3O43610 288 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 PPYP01298 95 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 THBDP07204 575 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 PET100P0DJ07 73 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 APOBEC3AP31941 199 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-214ENST00000495485 PRAMEF6Q5VXH4 476 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 ZNF660Q6AZW8 331 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-214ENST00000495485 ZNF880Q6PDB4 577 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 ZNF497Q6ZNH5 498 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 C20orf204Q6ZNR8 217 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 LRP11Q86VZ4 500 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 C11orf53Q8IXP5 236 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 ZNF295-AS1Q8N0V1 137 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 ADAD2Q8NCV1 583 aaKnown RBP8.64□□□□□ -1.03
HDAC3-214ENST00000495485 OR5M8Q8NGP6 311 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 NINJ1Q92982 152 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 TOMM40LQ969M1 308 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 RTBDNQ9BSG5 229 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-214ENST00000495485 TMEM204Q9BSN7 226 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 C5orf66Q9H5L9 145 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 METTL8Q9H825 291 aaKnown RBP8.64□□□□□ -1.03
HDAC3-214ENST00000495485 ZFP57Q9NU63 452 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 OPN4Q9UHM6 478 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 RNF115Q9Y4L5 304 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 WIPI2Q9Y4P8 454 aa8.64□□□□□ -1.03
HDAC3-214ENST00000495485 IGKV1D-8A0A087WSZ0 117 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-214ENST00000495485 C5orf51A6NDU8 294 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 CRYM-AS1A6NIL9 109 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 ZSCAN5BA6NJL1 495 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 HMSDA8MTL9 139 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 DEFB108AA8MXU0 73 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 NPIPB11E5RHQ5 1161 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 M0R233 179 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 HSPA12AO43301 675 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 CD55P08174 381 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 OR4A8P0C604 315 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 MUC1P15941 1255 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-214ENST00000495485 GZMHP20718 246 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 NFYAP23511 347 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-214ENST00000495485 COL8A1P27658 744 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 PRDX2P32119 198 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 SERPINF1P36955 418 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 NKX2-5P52952 324 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-214ENST00000495485 PIGPP57054 158 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 FXYD4P59646 89 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 PAX5Q02548 391 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 SRSF4Q08170 494 aaKnown RBP8.63□□□□□ -1.03
HDAC3-214ENST00000495485 NDUFA5Q16718 116 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 C17orf107Q6ZR85 190 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 KCTD9Q7L273 389 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 GAPTQ8N292 157 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 ASCC1Q8N9N2 400 aaKnown RBP8.63□□□□□ -1.03
HDAC3-214ENST00000495485 GRPEL2Q8TAA5 225 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 THAP6Q8TBB0 222 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 Q8TCH9 128 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 FAM216AQ8WUB2 273 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 ITLN1Q8WWA0 313 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 DYRK2Q92630 601 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 MRGPRFQ96AM1 343 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 GALMQ96C23 342 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 SNX22Q96L94 193 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 LURAP1Q96LR2 239 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 HS3ST6Q96QI5 342 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 CABLES2Q9BTV7 478 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 RSRP1Q9BUV0 290 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 DNTTIP1Q9H147 329 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 NCOR1P1Q9H4R4 102 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 IL36RNQ9UBH0 155 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 PPP1R3CQ9UQK1 317 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 RBM7Q9Y580 266 aaKnown RBP8.63□□□□□ -1.03
HDAC3-214ENST00000495485 ARFGEF3Q5TH69 2177 aa8.63□□□□□ -1.03
HDAC3-214ENST00000495485 RAI1Q7Z5J4 1906 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms