RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 HSPA13P48723 471 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 BLCAPP62952 87 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 RBM48Q5RL73 367 aaKnown RBP10.34□□□□□ -0.75
HDAC1-209ENST00000484305 SIGIRRQ6IA17 410 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 RAB12Q6IQ22 244 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 C11orf88Q6PI97 169 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 ZNF497Q6ZNH5 498 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 KLHDC1Q8N7A1 406 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 OR10A7Q8NGE5 316 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 UBALD1Q8TB05 177 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 TMEM203Q969S6 136 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 FAM46BQ96A09 425 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 CREB3L1Q96BA8 519 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 CNBD2Q96M20 576 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 Q96M66 194 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 CCDC90BQ9GZT6 254 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 SERTAD4Q9NUC0 356 aa10.34□□□□□ -0.75
HDAC1-209ENST00000484305 RCC2Q9P258 522 aaKnown RBP10.34□□□□□ -0.75
HDAC1-209ENST00000484305 A0A1W2PPE3 182 aa10.33□□□□□ -0.76
HDAC1-209ENST00000484305 MCRIP1C9JLW8 97 aa10.33□□□□□ -0.76
HDAC1-209ENST00000484305 AIPO00170 330 aa10.33□□□□□ -0.76
HDAC1-209ENST00000484305 UCHL1P09936 223 aa10.33□□□□□ -0.76
HDAC1-209ENST00000484305 MAP2K4P45985 399 aa10.33□□□□□ -0.76
HDAC1-209ENST00000484305 GNG10P50151 68 aa10.33□□□□□ -0.76
HDAC1-209ENST00000484305 RPS25P62851 125 aaKnown RBP10.33□□□□□ -0.76
HDAC1-209ENST00000484305 TPBGQ13641 420 aa10.33□□□□□ -0.76
HDAC1-209ENST00000484305 DIAPH2-AS1Q14236 149 aa10.33□□□□□ -0.76
HDAC1-209ENST00000484305 HERPUD1Q15011 391 aa10.33□□□□□ -0.76
HDAC1-209ENST00000484305 HSD17B12Q53GQ0 312 aa10.33□□□□□ -0.76
HDAC1-209ENST00000484305 TMEM91Q6ZNR0 172 aa10.33□□□□□ -0.76
HDAC1-209ENST00000484305 PRSS48Q7RTY5 328 aa10.33□□□□□ -0.76
HDAC1-209ENST00000484305 C11orf44Q8N8P7 122 aa10.33□□□□□ -0.76
HDAC1-209ENST00000484305 PHYHIPQ92561 330 aa10.33□□□□□ -0.76
HDAC1-209ENST00000484305 UFD1Q92890 307 aa10.33□□□□□ -0.76
HDAC1-209ENST00000484305 ARL11Q969Q4 196 aa10.33□□□□□ -0.76
HDAC1-209ENST00000484305 PRSS22Q9GZN4 317 aa10.33□□□□□ -0.76
HDAC1-209ENST00000484305 SPACA1Q9HBV2 294 aa10.33□□□□□ -0.76
HDAC1-209ENST00000484305 PEX16Q9Y5Y5 336 aa10.33□□□□□ -0.76
HDAC1-209ENST00000484305 UBE2QL1A1L167 161 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 FAM90A10PA6NDY2 464 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 FAM90A18PA6NE21 464 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 FAM90A16PA6NEW6 464 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 FAM90A20PA6NIJ5 464 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 FAM90A7PA6NKC0 464 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 FAM90A12PA8MX19 464 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 FAM90A5PA8MXJ8 464 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 FAM90A23PA8MXZ1 464 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 OOSP1A8MZH6 123 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 ORC5O43913 435 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 ATP6V1G2O95670 118 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 TSPAN15O95858 294 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 FAM90A15PP0C7V4 464 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 FAM90A13PP0C7W8 464 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 FAM90A14PP0C7W9 464 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 FAM90A24PP0C7X0 464 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 CD37P11049 281 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 FUT3P21217 361 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 ARHGDIBP52566 201 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 MLLT11Q13015 90 aaPredicted RBP10.32□□□□□ -0.76
HDAC1-209ENST00000484305 C1orf100Q5SVJ3 147 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 SYT6Q5T7P8 510 aaPredicted RBP10.32□□□□□ -0.76
HDAC1-209ENST00000484305 GLT8D1Q68CQ7 371 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 OR10K2Q6IF99 312 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 FAM53AQ6NSI3 398 aaPredicted RBP10.32□□□□□ -0.76
HDAC1-209ENST00000484305 SLC16A12Q6ZSM3 486 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 Q6ZTK2 550 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 DTX3Q8N9I9 347 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 OR4K15Q8NH41 348 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 CFHR4Q92496 578 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 TOMM40LQ969M1 308 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 RPEQ96AT9 228 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 KCNK15Q9H427 330 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 ISYNA1Q9NPH2 558 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 ETAA1Q9NY74 926 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 GHRLQ9UBU3 117 aa10.32□□□□□ -0.76
HDAC1-209ENST00000484305 AMMECR1Q9Y4X0 333 aaPredicted RBP10.32□□□□□ -0.76
HDAC1-209ENST00000484305 IGHV3-43A0A0B4J1X8 118 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 H3BUI4 141 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 SDCBPO00560 298 aaPredicted RBP10.31□□□□□ -0.76
HDAC1-209ENST00000484305 MPIG6BO95866 241 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 IGHV3-43DP0DP04 118 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 VSIG8P0DPA2 414 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 CPEP16870 476 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 MNDAP41218 407 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 LOXL3P58215 753 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 MADCAM1Q13477 382 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 TMEM95Q3KNT9 176 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 CCDC144NLQ6NUI1 221 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 GAPTQ8N292 157 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 OR52M1Q8NGK5 317 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 RBM14Q96PK6 669 aaKnown RBP10.31□□□□□ -0.76
HDAC1-209ENST00000484305 GFI1Q99684 422 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 MGLLQ99685 303 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 SLC25A33Q9BSK2 321 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 CST11Q9H112 138 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 MMP27Q9H306 513 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 LIN7BQ9HAP6 207 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 TRAPPC2LQ9UL33 140 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 RAB26Q9ULW5 256 aa10.31□□□□□ -0.76
HDAC1-209ENST00000484305 CMYA5Q8N3K9 4069 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms