RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 IGLL5B9A064 214 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 H0Y980 276 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 J3QLI3 93 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 M0QZ92 97 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 CDIPTO14735 213 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 ACOX3O15254 700 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 SYNGR1O43759 233 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 SNAP29O95721 258 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 IGLV6-57P01721 117 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 CD8AP01732 235 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 RPS17P08708 135 aaKnown RBP2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 LIMS3P0CW19 117 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 LIMS4P0CW20 117 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 C8orf88P0DMB2 117 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 INAFM2P0DMQ5 153 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 CD34P28906 385 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 IMPA1P29218 277 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 RHOAP61586 193 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 CD164Q04900 197 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 ZNF404Q494X3 552 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 OR10J3Q5JRS4 329 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 UBE2NLQ5JXB2 153 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 SYPL2Q5VXT5 272 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 SPOPLQ6IQ16 392 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 DNM1P34Q6PK57 102 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 C10orf67Q8IYJ2 551 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 ZNF664Q8N3J9 261 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 OR5B17Q8NGF7 314 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 YPEL4Q96NS1 127 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 MRPS26Q9BYN8 205 aaKnown RBP2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 PLA2G12AQ9BZM1 189 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 OR51B6Q9H340 312 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 DUSP21Q9H596 190 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 DIABLOQ9NR28 239 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 FGFR1OP2Q9NVK5 253 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 DNAJC27Q9NZQ0 273 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 ZNF492Q9P255 531 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 TRAPPC1Q9Y5R8 145 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 C9orf84Q5VXU9 1444 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 SCN4AP35499 1836 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 CD300LBA8K4G0 201 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 C4orf51C9J302 202 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 PGRMC1O00264 195 aaKnown RBP2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 TGOLN2O43493 480 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 ENSAO43768 121 aaKnown RBP2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 MPZL2O60487 215 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 SHOX2O60902 331 aaPredicted RBP2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 LYPLA2O95372 231 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 IGHG2P01859 326 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 IL6P05231 212 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 PTHLHP12272 177 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 GTF2H1P32780 548 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 RPA3P35244 121 aaPredicted RBP2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 ACOT2P49753 483 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 CCL23P55773 120 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 OR10A3P58181 314 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 RAB8AP61006 207 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 FMODQ06828 376 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 MLLT11Q13015 90 aaPredicted RBP2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 TRAM1Q15629 374 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 TAF9Q16594 264 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 SPIN3Q5JUX0 258 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 HBMQ6B0K9 141 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 BRD3OSQ6XYD6 125 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 TMEM144Q7Z5S9 345 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 LINC00596Q86U02 117 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 GAPTQ8N292 157 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 SPICQ8N5J4 248 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 ZFP62Q8NB50 900 aaPredicted RBP2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 OR4C13Q8NGP0 309 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 CCDC42Q96M95 316 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 PACRGQ96M98 296 aaPredicted RBP2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 PRAP1Q96NZ9 151 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 OR2V2Q96R30 315 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 STACQ99469 402 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 TM2D3Q9BRN9 247 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 NXF2Q9GZY0 626 aaKnown RBP2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 MFSD1Q9H3U5 465 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 ZNF391Q9UJN7 358 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 GUCA1BQ9UMX6 200 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 HIVEP2P31629 2446 aa2.29□□□□□ -2.04
SMNDC1-205ENST00000477763 F5H768 121 aa2.28□□□□□ -2.04
SMNDC1-205ENST00000477763 FABP7O15540 132 aa2.28□□□□□ -2.04
SMNDC1-205ENST00000477763 SSNA1O43805 119 aa2.28□□□□□ -2.04
SMNDC1-205ENST00000477763 UGT2B11O75310 529 aa2.28□□□□□ -2.04
SMNDC1-205ENST00000477763 CIAO1O76071 339 aa2.28□□□□□ -2.04
SMNDC1-205ENST00000477763 ISG15P05161 165 aa2.28□□□□□ -2.04
SMNDC1-205ENST00000477763 OR4E1P0C645 316 aa2.28□□□□□ -2.04
SMNDC1-205ENST00000477763 PVALBP20472 110 aaPredicted RBP2.28□□□□□ -2.04
SMNDC1-205ENST00000477763 SLCO1A2P46721 670 aa2.28□□□□□ -2.04
SMNDC1-205ENST00000477763 GNG10P50151 68 aa2.28□□□□□ -2.04
SMNDC1-205ENST00000477763 AQP5P55064 265 aa2.28□□□□□ -2.04
SMNDC1-205ENST00000477763 LSM6P62312 80 aaKnown RBP2.28□□□□□ -2.04
SMNDC1-205ENST00000477763 ENDOGQ14249 297 aaKnown RBP2.28□□□□□ -2.04
SMNDC1-205ENST00000477763 PDK2Q15119 407 aa2.28□□□□□ -2.04
SMNDC1-205ENST00000477763 TRIP13Q15645 432 aaPredicted RBP2.28□□□□□ -2.04
SMNDC1-205ENST00000477763 TBC1D28Q2M2D7 210 aa2.28□□□□□ -2.04
SMNDC1-205ENST00000477763 TMEM176BQ3YBM2 270 aaPredicted RBP2.28□□□□□ -2.04
SMNDC1-205ENST00000477763 DEFB134Q4QY38 66 aa2.28□□□□□ -2.04
SMNDC1-205ENST00000477763 LDLRAD2Q5SZI1 272 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms