RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 TMPRSS11AQ6ZMR5 421 aa10.49□□□□□ -0.73
CPSF4-210ENST00000469897 ETV3LQ6ZN32 361 aa10.49□□□□□ -0.73
CPSF4-210ENST00000469897 C8orf86Q6ZUL3 223 aa10.49□□□□□ -0.73
CPSF4-210ENST00000469897 OR2W3Q7Z3T1 314 aa10.49□□□□□ -0.73
CPSF4-210ENST00000469897 SLC35E3Q7Z769 313 aa10.49□□□□□ -0.73
CPSF4-210ENST00000469897 OR8H3Q8N146 312 aa10.49□□□□□ -0.73
CPSF4-210ENST00000469897 ARL11Q969Q4 196 aa10.49□□□□□ -0.73
CPSF4-210ENST00000469897 RBMXL1Q96E39 390 aaKnown RBP10.49□□□□□ -0.73
CPSF4-210ENST00000469897 EAF1Q96JC9 268 aaPredicted RBP10.49□□□□□ -0.73
CPSF4-210ENST00000469897 PLXNB1O43157 2135 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 IGHV3-43A0A0B4J1X8 118 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 IGHV1-3A0A0C4DH29 117 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 A0A1W2PP11 408 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 TMEM30CPA0ZSE6 113 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 NUDT19A8MXV4 375 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 SDCBPO00560 298 aaPredicted RBP10.48□□□□□ -0.73
CPSF4-210ENST00000469897 HSD17B6O14756 317 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 OGG1O15527 345 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 BAG2O95816 211 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 LALBAP00709 142 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 IGHG2P01859 326 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 MT-ND4P03905 459 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 IGHV3-43DP0DP04 118 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 DCKP27707 260 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 RBM11P57052 281 aaKnown RBP10.48□□□□□ -0.73
CPSF4-210ENST00000469897 PPP3R1P63098 170 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 EBI3Q14213 229 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 VAX1Q5SQQ9 334 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 PQLC1Q8N2U9 271 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 ZNF555Q8NEP9 628 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 OR51D1Q8NGF3 324 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 OR13C5Q8NGS8 318 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 GHSRQ92847 366 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 IFT22Q9H7X7 185 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 ZFP57Q9NU63 452 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 IL36GQ9NZH8 169 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 CLEC2DQ9UHP7 191 aa10.48□□□□□ -0.73
CPSF4-210ENST00000469897 A0A1W2PPK0 400 aa10.47□□□□□ -0.73
CPSF4-210ENST00000469897 MYCNOSP40205 109 aa10.47□□□□□ -0.73
CPSF4-210ENST00000469897 SLC35B1P78383 322 aa10.47□□□□□ -0.73
CPSF4-210ENST00000469897 EGFEM1PQ0D2K5 195 aa10.47□□□□□ -0.73
CPSF4-210ENST00000469897 ZNF816Q0VGE8 651 aaPredicted RBP10.47□□□□□ -0.73
CPSF4-210ENST00000469897 SLC22A6Q4U2R8 563 aa10.47□□□□□ -0.73
CPSF4-210ENST00000469897 NHLRC3Q5JS37 347 aa10.47□□□□□ -0.73
CPSF4-210ENST00000469897 FOXRED2Q8IWF2 684 aa10.47□□□□□ -0.73
CPSF4-210ENST00000469897 STPG2Q8N412 459 aa10.47□□□□□ -0.73
CPSF4-210ENST00000469897 NEK7Q8TDX7 302 aa10.47□□□□□ -0.73
CPSF4-210ENST00000469897 DUX3Q96PT4 197 aa10.47□□□□□ -0.73
CPSF4-210ENST00000469897 ZNF184Q99676 751 aaPredicted RBP10.47□□□□□ -0.73
CPSF4-210ENST00000469897 PAK1IP1Q9NWT1 392 aaPredicted RBP10.47□□□□□ -0.73
CPSF4-210ENST00000469897 DNAH3Q8TD57 4116 aa10.47□□□□□ -0.73
CPSF4-210ENST00000469897 ZNF736B4DX44 427 aaPredicted RBP10.46□□□□□ -0.73
CPSF4-210ENST00000469897 ORC5O43913 435 aa10.46□□□□□ -0.73
CPSF4-210ENST00000469897 ZNF780AO75290 641 aaPredicted RBP10.46□□□□□ -0.73
CPSF4-210ENST00000469897 GTF2F2P13984 249 aa10.46□□□□□ -0.73
CPSF4-210ENST00000469897 IGFBP3P17936 291 aaPredicted RBP10.46□□□□□ -0.73
CPSF4-210ENST00000469897 RIPK1Q13546 671 aa10.46□□□□□ -0.73
CPSF4-210ENST00000469897 C11orf87Q6NUJ2 197 aa10.46□□□□□ -0.73
CPSF4-210ENST00000469897 ZNF497Q6ZNH5 498 aa10.46□□□□□ -0.73
CPSF4-210ENST00000469897 TGIF2LXQ8IUE1 241 aa10.46□□□□□ -0.73
CPSF4-210ENST00000469897 ZNF695Q8IW36 515 aa10.46□□□□□ -0.73
CPSF4-210ENST00000469897 ZFP41Q8N8Y5 198 aa10.46□□□□□ -0.73
CPSF4-210ENST00000469897 KLHL30-AS1Q8NEE0 82 aa10.46□□□□□ -0.73
CPSF4-210ENST00000469897 OR52M1Q8NGK5 317 aa10.46□□□□□ -0.73
CPSF4-210ENST00000469897 OR2T10Q8NGZ9 312 aa10.46□□□□□ -0.73
CPSF4-210ENST00000469897 SMIM19Q96E16 107 aa10.46□□□□□ -0.73
CPSF4-210ENST00000469897 PLSCR3Q9NRY6 295 aa10.46□□□□□ -0.73
CPSF4-210ENST00000469897 GFOD1Q9NXC2 390 aa10.46□□□□□ -0.73
CPSF4-210ENST00000469897 SMPD3Q9NY59 655 aaPredicted RBP10.46□□□□□ -0.73
CPSF4-210ENST00000469897 TRAV8-7A0A075B6U6 113 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 TRBV5-5A0A0J9YX44 114 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 MAGEA13PA6NCF6 341 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 MCRIP1C9JLW8 97 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 AIPO00170 330 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 SLC31A2O15432 143 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 GPR12P47775 334 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 ZNF134P52741 427 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 PNLIPRP3Q17RR3 467 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 MPV17LQ2QL34 196 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 SYT6Q5T7P8 510 aaPredicted RBP10.45□□□□□ -0.74
CPSF4-210ENST00000469897 TEX38Q6PEX7 206 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 GLIPR1L1Q6UWM5 242 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 LCNL1Q6ZST4 164 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 LINC00596Q86U02 117 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 STX19Q8N4C7 294 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 LINC00311Q8N616 119 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 COMMD1Q8N668 190 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 Q8N6K4 173 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 Q8N9W7 124 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 OR4K15Q8NH41 348 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 RTN4IP1Q8WWV3 396 aaPredicted RBP10.45□□□□□ -0.74
CPSF4-210ENST00000469897 DPF1Q92782 380 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 MUL1Q969V5 352 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 ST6GALNAC6Q969X2 333 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 TMEM80Q96HE8 168 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 P2RX4Q99571 388 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 MCRIP2Q9BUT9 160 aaKnown RBP10.45□□□□□ -0.74
CPSF4-210ENST00000469897 ABCG5Q9H222 651 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 DCLRE1BQ9H816 532 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 CHCHD3Q9NX63 227 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms