RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 MINOS1Q5TGZ0 78 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 RAB12Q6IQ22 244 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 TRAT1Q6PIZ9 186 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 ZNF497Q6ZNH5 498 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 PDZD9Q8IXQ8 264 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 GAPTQ8N292 157 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.66□□□□□ -0.86
VPS52-213ENST00000461743 TMEM104Q8NE00 496 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 PLPPR1Q8TBJ4 325 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 GFI1Q99684 422 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 CLEC7AQ9BXN2 247 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 AKIP1Q9NQ31 210 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 KIF25Q9UIL4 384 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 MINOS1-NBL1R4GNA1 71 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 V9GY05 133 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 MEIKINA0A087WXM9 373 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 IGHV2-26A0A0B4J1V2 119 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 PDCD6O75340 191 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 MPIG6BO95866 241 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 ARSBP15848 533 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 FUT3P21217 361 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 COX7A1P24310 79 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 CDK2P24941 298 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 IER3P46695 156 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 COMPP49747 757 aaPredicted RBP9.65□□□□□ -0.86
VPS52-213ENST00000461743 DLX1P56177 255 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 ACTG1P63261 375 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 QRFPP83859 136 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 SLC16A12Q6ZSM3 486 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 PNKDQ8N490 385 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 ZNF596Q8TC21 504 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 NEK7Q8TDX7 302 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 DYRK2Q92630 601 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 CREB3L1Q96BA8 519 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 URM1Q9BTM9 101 aaKnown RBP9.65□□□□□ -0.86
VPS52-213ENST00000461743 MEGF9Q9H1U4 602 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 BANF2Q9H503 90 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 CALYQ9NYX4 217 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 STEAP1Q9UHE8 339 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 SSR3Q9UNL2 185 aa9.65□□□□□ -0.86
VPS52-213ENST00000461743 AK6Q9Y3D8 172 aaKnown RBP9.65□□□□□ -0.86
VPS52-213ENST00000461743 TMEM89A2RUT3 159 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 NPIPB11E5RHQ5 1161 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 AIPO00170 330 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 ORC5O43913 435 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 ARG1P05089 322 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 CGB3P0DN86 165 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 CGB7P0DN87 165 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 ZNF182P17025 639 aaPredicted RBP9.64□□□□□ -0.87
VPS52-213ENST00000461743 RAB3BP20337 219 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 GZMHP20718 246 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 SRSF2Q01130 221 aaKnown RBP9.64□□□□□ -0.87
VPS52-213ENST00000461743 UNC119Q13432 240 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 NEDD8Q15843 81 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 C17orf58Q2M2W7 97 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 LRRC75BQ2VPJ9 315 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 Q3ZCU0 254 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 C6orf183Q5T699 404 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 PRAMEF5Q5TYX0 476 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 C22orf42Q6IC83 251 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 GDPGP1Q6ZNW5 385 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 LIAT1Q6ZQX7 453 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 TPRA1Q86W33 373 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 ANKRD13BQ86YJ7 626 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 OR13A1Q8NGR1 328 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 FAM46BQ96A09 425 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 MALSU1Q96EH3 234 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 KIRREL1Q96J84 757 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 NEDD4LQ96PU5 975 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 NAA50Q9GZZ1 169 aaKnown RBP9.64□□□□□ -0.87
VPS52-213ENST00000461743 TXNL4BQ9NX01 149 aaKnown RBP9.64□□□□□ -0.87
VPS52-213ENST00000461743 ZNF581Q9P0T4 197 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 VPREB3Q9UKI3 123 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 PEX16Q9Y5Y5 336 aa9.64□□□□□ -0.87
VPS52-213ENST00000461743 SOX21Q9Y651 276 aaPredicted RBP9.64□□□□□ -0.87
VPS52-213ENST00000461743 IFITM5A6NNB3 132 aa9.63□□□□□ -0.87
VPS52-213ENST00000461743 RGS13O14921 159 aa9.63□□□□□ -0.87
VPS52-213ENST00000461743 TMEM127O75204 238 aa9.63□□□□□ -0.87
VPS52-213ENST00000461743 HKR1P10072 659 aa9.63□□□□□ -0.87
VPS52-213ENST00000461743 CHATP28329 748 aa9.63□□□□□ -0.87
VPS52-213ENST00000461743 PRB3Q04118 309 aaPredicted RBP9.63□□□□□ -0.87
VPS52-213ENST00000461743 SIGIRRQ6IA17 410 aa9.63□□□□□ -0.87
VPS52-213ENST00000461743 MOB1BQ7L9L4 216 aa9.63□□□□□ -0.87
VPS52-213ENST00000461743 OR52M1Q8NGK5 317 aa9.63□□□□□ -0.87
VPS52-213ENST00000461743 MRGPRDQ8TDS7 321 aa9.63□□□□□ -0.87
VPS52-213ENST00000461743 PTX4Q96A99 478 aa9.63□□□□□ -0.87
VPS52-213ENST00000461743 FAM3DQ96BQ1 224 aa9.63□□□□□ -0.87
VPS52-213ENST00000461743 AJUBAQ96IF1 538 aa9.63□□□□□ -0.87
VPS52-213ENST00000461743 KCTD7Q96MP8 289 aa9.63□□□□□ -0.87
VPS52-213ENST00000461743 RAB18Q9NP72 206 aa9.63□□□□□ -0.87
VPS52-213ENST00000461743 IDI2-AS1Q9NZ38 188 aa9.63□□□□□ -0.87
VPS52-213ENST00000461743 AMMECR1Q9Y4X0 333 aaPredicted RBP9.63□□□□□ -0.87
VPS52-213ENST00000461743 A0A1W2PRD5 423 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 A0A1W2PRF3 423 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 A0A1W2PRM7 423 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 SHISA3A0PJX4 238 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 MEX3AA1L020 520 aaKnown RBP9.62□□□□□ -0.87
VPS52-213ENST00000461743 POM121CA8CG34 1229 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 LDLRAD4O15165 306 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 IGLV1-47P01700 117 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms