RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 KISS1Q15726 138 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 UBE2V2Q15819 145 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 STK11Q15831 433 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 RSPO1Q2MKA7 263 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 CEACAM16Q2WEN9 425 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 SLC22A6Q4U2R8 563 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 VAX1Q5SQQ9 334 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 RIPPLY2Q5TAB7 128 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 THOC7Q6I9Y2 204 aaKnown RBP2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 RTL6Q6ICC9 239 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 SPINK14Q6IE38 97 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR52W1Q6IF63 320 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF774Q6NX45 483 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 LPCAT3Q6P1A2 487 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 FAHD2BQ6P2I3 314 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 PLXDC2Q6UX71 529 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 C3P1Q6ZMU1 363 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 IL17RELQ6ZVW7 336 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 TMUB2Q71RG4 321 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 SLC16A14Q7RTX9 510 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 LYG2Q86SG7 212 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 TMEM17Q86X19 198 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 HOGA1Q86XE5 327 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 CPAMD8Q8IZJ3 1885 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 FAM89BQ8N5H3 189 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 ARRDC1Q8N5I2 433 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 GVQW1Q8N7I0 195 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 TMEM104Q8NE00 496 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR5H2Q8NGV7 314 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 TERB2Q8NHR7 220 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 ANGPTL6Q8NI99 470 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 FGFBP3Q8TAT2 258 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 SSC4DQ8WTU2 575 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 PSMF1Q92530 271 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 HAS2Q92819 552 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 PIGTQ969N2 578 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 CPNE4Q96A23 557 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 TMEM45BQ96B21 275 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 TMEM186Q96B77 213 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 CPNE2Q96FN4 548 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 FAHD2AQ96GK7 314 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 REEP6Q96HR9 211 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 C1orf147Q96MC9 270 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 IP6K3Q96PC2 410 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 SPACA5Q96QH8 159 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 FAM173AQ9BQD7 235 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 TM2D1Q9BX74 207 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 PECRQ9BY49 303 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 CHST5Q9GZS9 411 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 MFFQ9GZY8 342 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 FXYD6Q9H0Q3 95 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 METTL9Q9H1A3 318 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 RGCCQ9H4X1 137 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 BANF2Q9H503 90 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 CRLF2Q9HC73 371 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 ACKR4Q9NPB9 350 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 GPR173Q9NS66 373 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 DEPPQ9NTK1 212 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 COMMD9Q9P000 198 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 B4GALT7Q9UBV7 327 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 KCNN3Q9UGI6 736 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 OPN4Q9UHM6 478 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 KIF25Q9UIL4 384 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 SH3BGRL2Q9UJC5 107 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF391Q9UJN7 358 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 ANAPC10Q9UM13 185 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 BOKQ9UMX3 212 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 GAB2Q9UQC2 676 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 VSIG4Q9Y279 399 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 WDR83OSQ9Y284 106 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 NOP16Q9Y3C1 178 aaKnown RBP2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 AUP1Q9Y679 476 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 PCNTO95613 3336 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 ABCA7Q8IZY2 2146 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 EML5Q05BV3 1969 aa2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 TNRC6BQ9UPQ9 1833 aaKnown RBP2.89□□□□□ -1.95
HMGB3P11-201ENST00000440127 HEATR5AQ86XA9 2040 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 IGKV3D-15A0A087WSY6 115 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 TRAV24A0A0B4J272 114 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 A0A0B4J2A0 478 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 A0A0D9SG52 128 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 FAM230AA0A1W2PPH8 454 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR6C6A6NF89 314 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR5H14A6NHG9 310 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR2AT4A6NND4 320 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 FOXI3A8MTJ6 420 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 SERPINE3A8MV23 424 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 KLRC4-KLRK1H3BQV0 150 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 MFNGO00587 321 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 CDX4O14627 284 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 XRCC2O43543 280 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 SMPD2O60906 423 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 MRPL33O75394 65 aaKnown RBP2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 RP2O75695 350 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 RAD51DO75771 328 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 FARS2O95363 451 aaKnown RBP2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 DUS4LO95620 317 aaKnown RBP2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 F10P00742 488 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 CFDP00746 253 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 CD8AP01732 235 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms