RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	ANXA7	P20073	488 aa	Known RBP	5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	MPV17	P39210	176 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	DDOST	P39656	456 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	CHN2	P52757	468 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	WNT4	P56705	351 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	SLC35A2	P78381	396 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	MFGE8	Q08431	387 aa	Predicted RBP	5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	GK2	Q14410	553 aa	Predicted RBP	5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	EFNB3	Q15768	340 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	CARTPT	Q16568	116 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	TATDN3	Q17R31	274 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	ODF4	Q2M2E3	257 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	ZNF684	Q5T5D7	378 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	TMEM244	Q5VVB8	128 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	OR2T2	Q6IF00	324 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	RPL22L1	Q6P5R6	122 aa	Known RBP	5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	PAMR1	Q6UXH9	720 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	FBXW12	Q6X9E4	464 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	ASCL4	Q6XD76	172 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	ACOT7L	Q6ZUV0	252 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	DOK3	Q7L591	496 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	PRSS48	Q7RTY5	328 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	OR5AS1	Q8N127	324 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	OR2G2	Q8NGZ5	317 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	OR5AK2	Q8NH90	309 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	OR2AE1	Q8NHA4	323 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	NRGN	Q92686	78 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	PELI1	Q96FA3	418 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	NARS2	Q96I59	477 aa	Known RBP	5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	AJUBA	Q96IF1	538 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	HIST1H2AA	Q96QV6	131 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	RAB40C	Q96S21	281 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	VPS25	Q9BRG1	176 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	CDCA4	Q9BXL8	241 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	RBM38	Q9H0Z9	239 aa	Known RBP	5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	SIRPD	Q9H106	197 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	DUSP21	Q9H596	190 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	ISG20L2	Q9H9L3	353 aa	Known RBP	5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	PLEKHA1	Q9HB21	404 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	SEBOX	Q9HB31	216 aa	Predicted RBP	5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	SLC2A9	Q9NRM0	540 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	TMEM100	Q9NV29	134 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	PLEKHJ1	Q9NW61	149 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	COPZ2	Q9P299	210 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	SLC23A1	Q9UHI7	598 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	NUFIP1	Q9UHK0	495 aa	Known RBP	5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	ZNF221	Q9UK13	617 aa		5.23	□□□□□ -1.57
ECHDC1-208	ENST00000436638	NBEA	Q8NFP9	2946 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	IGLV3-9	A0A075B6K5	115 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638		A0A1W2PRX2	142 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	TMEM212	A6NML5	194 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	CD300LB	A8K4G0	201 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	CENPX	A8MT69	81 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	IQCF6	A8MYZ5	107 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	TEX22	C9J3V5	150 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638		I3L521	148 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	SIGLEC5	O15389	551 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	RGS5	O15539	181 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	SYT7	O43581	403 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	SPRY3	O43610	288 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	SRSF10	O75494	262 aa	Known RBP	5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	EIF3G	O75821	320 aa	Known RBP eCLIP	5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	SCO1	O75880	301 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	TNFAIP8	O95379	198 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	LY86	O95711	162 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	TTR	P02766	147 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	CD5	P06127	495 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	SOD3	P08294	240 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	DANCR	P0C864	163 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	ZNF20	P17024	532 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	KITLG	P21583	273 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	NR4A2	P43354	598 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	PPOX	P50336	477 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	PPT1	P50897	306 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	ART1	P52961	327 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	CRYBA4	P53673	196 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	KRTAP10-9	P60411	292 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	FAM3A	P98173	230 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	ZNF92	Q03936	586 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	PSG7	Q13046	419 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	SPHAR	Q15513	63 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	GCSAML	Q5JQS6	135 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	WDR38	Q5JTN6	314 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	RSBN1	Q5VWQ0	802 aa	Predicted RBP	5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	DGAT2L7P	Q6IED9	249 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	PRSS45	Q7RTY3	260 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	DTX2	Q86UW9	622 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	LRP11	Q86VZ4	500 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	FAM219A	Q8IW50	185 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	ARRDC1	Q8N5I2	433 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	OR8G5	Q8NG78	346 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	OR13G1	Q8NGZ3	307 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	OR8S1	Q8NH09	359 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	OR51E1	Q8TCB6	317 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	MRAP	Q8TCY5	172 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	NEU4	Q8WWR8	484 aa	Predicted RBP	5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	RORB	Q92753	470 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	GCDH	Q92947	438 aa	Predicted RBP	5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	SFRP2	Q96HF1	295 aa		5.22	□□□□□ -1.57
ECHDC1-208	ENST00000436638	SORCS2	Q96PQ0	1159 aa		5.22	□□□□□ -1.57

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