RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 ARL11Q969Q4 196 aa14.09□□□□□ -0.15
NUP50-208ENST00000430547 UQCC2Q9BRT2 126 aa14.09□□□□□ -0.15
NUP50-208ENST00000430547 TMED9Q9BVK6 235 aa14.09□□□□□ -0.15
NUP50-208ENST00000430547 SELENOIQ9C0D9 397 aa14.09□□□□□ -0.15
NUP50-208ENST00000430547 RAB9BQ9NP90 201 aa14.09□□□□□ -0.15
NUP50-208ENST00000430547 TPRKBQ9Y3C4 175 aa14.09□□□□□ -0.15
NUP50-208ENST00000430547 LY6LH3BQJ8 138 aa14.08□□□□□ -0.16
NUP50-208ENST00000430547 PIN1P1O15428 100 aa14.08□□□□□ -0.16
NUP50-208ENST00000430547 FAM106CPP0CH98 169 aa14.08□□□□□ -0.16
NUP50-208ENST00000430547 MGMTP16455 207 aa14.08□□□□□ -0.16
NUP50-208ENST00000430547 GPR50Q13585 617 aa14.08□□□□□ -0.16
NUP50-208ENST00000430547 ACSM3Q53FZ2 586 aa14.08□□□□□ -0.16
NUP50-208ENST00000430547 UTF1Q5T230 341 aa14.08□□□□□ -0.16
NUP50-208ENST00000430547 RAB12Q6IQ22 244 aa14.08□□□□□ -0.16
NUP50-208ENST00000430547 NRG4Q8WWG1 115 aa14.08□□□□□ -0.16
NUP50-208ENST00000430547 RBM14Q96PK6 669 aaKnown RBP14.08□□□□□ -0.16
NUP50-208ENST00000430547 BANF2Q9H503 90 aa14.08□□□□□ -0.16
NUP50-208ENST00000430547 ETAA1Q9NY74 926 aa14.08□□□□□ -0.16
NUP50-208ENST00000430547 TRAPPC2LQ9UL33 140 aa14.08□□□□□ -0.16
NUP50-208ENST00000430547 H0YHG0 523 aa14.07□□□□□ -0.16
NUP50-208ENST00000430547 M0QZK8 103 aa14.07□□□□□ -0.16
NUP50-208ENST00000430547 SDCBPO00560 298 aaPredicted RBP14.07□□□□□ -0.16
NUP50-208ENST00000430547 ORC5O43913 435 aa14.07□□□□□ -0.16
NUP50-208ENST00000430547 RAB7AP51149 207 aa14.07□□□□□ -0.16
NUP50-208ENST00000430547 HES1Q14469 280 aa14.07□□□□□ -0.16
NUP50-208ENST00000430547 NSUN5P1Q3KNT7 163 aa14.07□□□□□ -0.16
NUP50-208ENST00000430547 TMEM95Q3KNT9 176 aa14.07□□□□□ -0.16
NUP50-208ENST00000430547 RBM48Q5RL73 367 aaKnown RBP14.07□□□□□ -0.16
NUP50-208ENST00000430547 HIST2H2BDQ6DRA6 164 aa14.07□□□□□ -0.16
NUP50-208ENST00000430547 ZNF497Q6ZNH5 498 aa14.07□□□□□ -0.16
NUP50-208ENST00000430547 CST11Q9H112 138 aa14.07□□□□□ -0.16
NUP50-208ENST00000430547 RCC2Q9P258 522 aaKnown RBP14.07□□□□□ -0.16
NUP50-208ENST00000430547 GHRLQ9UBU3 117 aa14.07□□□□□ -0.16
NUP50-208ENST00000430547 PEX16Q9Y5Y5 336 aa14.07□□□□□ -0.16
NUP50-208ENST00000430547 CMYA5Q8N3K9 4069 aa14.07□□□□□ -0.16
NUP50-208ENST00000430547 FAM90A10PA6NDY2 464 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 FAM90A18PA6NE21 464 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 FAM90A16PA6NEW6 464 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 ERICH4A6NGS2 130 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 FAM90A20PA6NIJ5 464 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 FAM90A7PA6NKC0 464 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 FAM90A12PA8MX19 464 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 FAM90A5PA8MXJ8 464 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 FAM90A23PA8MXZ1 464 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 SPINT2O43291 252 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 KCNAB3O43448 404 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 MT-ND4P03905 459 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 FAM90A15PP0C7V4 464 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 FAM90A13PP0C7W8 464 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 FAM90A14PP0C7W9 464 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 FAM90A24PP0C7X0 464 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 CD28P10747 220 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 INSL4Q14641 139 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 ABCA11PQ4W5N1 156 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 C6orf183Q5T699 404 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 GLT8D1Q68CQ7 371 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 Q6ZS46 218 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 OR8H3Q8N146 312 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 LYG1Q8N1E2 194 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 OR52M1Q8NGK5 317 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 OR56B4Q8NH76 319 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 UFD1Q92890 307 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 FAM46BQ96A09 425 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 WNT10AQ9GZT5 417 aa14.06□□□□□ -0.16
NUP50-208ENST00000430547 A0A1W2PPE3 182 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 HSD17B6O14756 317 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 RGS10O43665 173 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 LPLP06858 475 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 SNRNP70P08621 437 aaKnown RBP14.05□□□□□ -0.16
NUP50-208ENST00000430547 UBBP0CG47 229 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 HSMCR30P0CW71 290 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 FUT3P21217 361 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 MYF6P23409 242 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 IL3RAP26951 378 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 SLC35A2P78381 396 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 EMX1Q04741 257 aaPredicted RBP14.05□□□□□ -0.16
NUP50-208ENST00000430547 HSD17B12Q53GQ0 312 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 C9orf152Q5JTZ5 239 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 SYT6Q5T7P8 510 aaPredicted RBP14.05□□□□□ -0.16
NUP50-208ENST00000430547 DRAM1Q8N682 238 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 TMEM104Q8NE00 496 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 OR4K15Q8NH41 348 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 UBALD1Q8TB05 177 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 PHYHIPQ92561 330 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 Q96M66 194 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 ANKRD60Q9BZ19 345 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 CCDC90BQ9GZT6 254 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 LSM2Q9Y333 95 aaKnown RBP14.05□□□□□ -0.16
NUP50-208ENST00000430547 MOB4Q9Y3A3 225 aa14.05□□□□□ -0.16
NUP50-208ENST00000430547 NOTCH1P46531 2555 aa14.04□□□□□ -0.16
NUP50-208ENST00000430547 A0A1W2PPI3 338 aa14.04□□□□□ -0.16
NUP50-208ENST00000430547 C15orf65H3BRN8 121 aa14.04□□□□□ -0.16
NUP50-208ENST00000430547 CA11O75493 328 aa14.04□□□□□ -0.16
NUP50-208ENST00000430547 MPIG6BO95866 241 aa14.04□□□□□ -0.16
NUP50-208ENST00000430547 TMEM11P17152 192 aa14.04□□□□□ -0.16
NUP50-208ENST00000430547 HSPA13P48723 471 aa14.04□□□□□ -0.16
NUP50-208ENST00000430547 TMEM30BQ3MIR4 351 aa14.04□□□□□ -0.16
NUP50-208ENST00000430547 FAM27D1Q5T7N8 215 aa14.04□□□□□ -0.16
NUP50-208ENST00000430547 LIPKQ5VXJ0 399 aa14.04□□□□□ -0.16
NUP50-208ENST00000430547 TRAT1Q6PIZ9 186 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms