RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 OR9G1Q8NH87 305 aa16.35■□□□□ 0.21
GTF3A-202ENST00000419181 RFESDQ8TAC1 157 aa16.35■□□□□ 0.21
GTF3A-202ENST00000419181 NEK7Q8TDX7 302 aa16.35■□□□□ 0.21
GTF3A-202ENST00000419181 CREB3L1Q96BA8 519 aa16.35■□□□□ 0.21
GTF3A-202ENST00000419181 MGLLQ99685 303 aa16.35■□□□□ 0.21
GTF3A-202ENST00000419181 NPFFR1Q9GZQ6 430 aa16.35■□□□□ 0.21
GTF3A-202ENST00000419181 LEUTXA8MZ59 168 aa16.34■□□□□ 0.21
GTF3A-202ENST00000419181 LY6LH3BQJ8 138 aa16.34■□□□□ 0.21
GTF3A-202ENST00000419181 BUB1B-PAK6H3BSN5 160 aa16.34■□□□□ 0.21
GTF3A-202ENST00000419181 UBBP0CG47 229 aa16.34■□□□□ 0.21
GTF3A-202ENST00000419181 PSMA1P25786 263 aaKnown RBP16.34■□□□□ 0.21
GTF3A-202ENST00000419181 PRRX1P54821 245 aa16.34■□□□□ 0.21
GTF3A-202ENST00000419181 RAB12Q6IQ22 244 aa16.34■□□□□ 0.21
GTF3A-202ENST00000419181 TMEM219Q86XT9 240 aa16.34■□□□□ 0.21
GTF3A-202ENST00000419181 FAM46BQ96A09 425 aa16.34■□□□□ 0.21
GTF3A-202ENST00000419181 CST11Q9H112 138 aa16.34■□□□□ 0.21
GTF3A-202ENST00000419181 MMP28Q9H239 520 aa16.34■□□□□ 0.21
GTF3A-202ENST00000419181 MCRIP1C9JLW8 97 aa16.33■□□□□ 0.2
GTF3A-202ENST00000419181 MT-ND4P03905 459 aa16.33■□□□□ 0.2
GTF3A-202ENST00000419181 GZMHP20718 246 aa16.33■□□□□ 0.2
GTF3A-202ENST00000419181 CEACAM3P40198 252 aa16.33■□□□□ 0.2
GTF3A-202ENST00000419181 EFNB2P52799 333 aa16.33■□□□□ 0.2
GTF3A-202ENST00000419181 RBM39Q14498 530 aaKnown RBP16.33■□□□□ 0.2
GTF3A-202ENST00000419181 SIGIRRQ6IA17 410 aa16.33■□□□□ 0.2
GTF3A-202ENST00000419181 ZNF367Q7RTV3 350 aa16.33■□□□□ 0.2
GTF3A-202ENST00000419181 GAPTQ8N292 157 aa16.33■□□□□ 0.2
GTF3A-202ENST00000419181 LEAP2Q969E1 77 aa16.33■□□□□ 0.2
GTF3A-202ENST00000419181 SIGLEC9Q9Y336 463 aa16.33■□□□□ 0.2
GTF3A-202ENST00000419181 C15orf65H3BRN8 121 aa16.32■□□□□ 0.2
GTF3A-202ENST00000419181 J3QR06 171 aa16.32■□□□□ 0.2
GTF3A-202ENST00000419181 AIPO00170 330 aa16.32■□□□□ 0.2
GTF3A-202ENST00000419181 SLC22A1O15245 554 aa16.32■□□□□ 0.2
GTF3A-202ENST00000419181 VSIG8P0DPA2 414 aa16.32■□□□□ 0.2
GTF3A-202ENST00000419181 FUT3P21217 361 aa16.32■□□□□ 0.2
GTF3A-202ENST00000419181 GABARAPL2P60520 117 aa16.32■□□□□ 0.2
GTF3A-202ENST00000419181 LTC4SQ16873 150 aa16.32■□□□□ 0.2
GTF3A-202ENST00000419181 TPTE2P1Q5T6R2 138 aa16.32■□□□□ 0.2
GTF3A-202ENST00000419181 SLC16A12Q6ZSM3 486 aa16.32■□□□□ 0.2
GTF3A-202ENST00000419181 OR2T6Q8NHC8 308 aa16.32■□□□□ 0.2
GTF3A-202ENST00000419181 ACOT13Q9NPJ3 140 aa16.32■□□□□ 0.2
GTF3A-202ENST00000419181 ETAA1Q9NY74 926 aa16.32■□□□□ 0.2
GTF3A-202ENST00000419181 PSG11Q9UQ72 335 aa16.32■□□□□ 0.2
GTF3A-202ENST00000419181 PEX16Q9Y5Y5 336 aa16.32■□□□□ 0.2
GTF3A-202ENST00000419181 DENRO43583 198 aaKnown RBP16.31■□□□□ 0.2
GTF3A-202ENST00000419181 ORC5O43913 435 aa16.31■□□□□ 0.2
GTF3A-202ENST00000419181 ARL6IP5O75915 188 aa16.31■□□□□ 0.2
GTF3A-202ENST00000419181 MPIG6BO95866 241 aa16.31■□□□□ 0.2
GTF3A-202ENST00000419181 IGHV3-7P01780 117 aa16.31■□□□□ 0.2
GTF3A-202ENST00000419181 GLAP06280 429 aa16.31■□□□□ 0.2
GTF3A-202ENST00000419181 HTR2CP28335 458 aa16.31■□□□□ 0.2
GTF3A-202ENST00000419181 BRS3P32247 399 aa16.31■□□□□ 0.2
GTF3A-202ENST00000419181 ARHGDIBP52566 201 aa16.31■□□□□ 0.2
GTF3A-202ENST00000419181 FABP5Q01469 135 aa16.31■□□□□ 0.2
GTF3A-202ENST00000419181 C11orf88Q6PI97 169 aa16.31■□□□□ 0.2
GTF3A-202ENST00000419181 Q8N2B8 174 aa16.31■□□□□ 0.2
GTF3A-202ENST00000419181 DTX3Q8N9I9 347 aa16.31■□□□□ 0.2
GTF3A-202ENST00000419181 OR6M1Q8NGM8 313 aa16.31■□□□□ 0.2
GTF3A-202ENST00000419181 CCDC107Q8WV48 283 aa16.31■□□□□ 0.2
GTF3A-202ENST00000419181 GFI1Q99684 422 aa16.31■□□□□ 0.2
GTF3A-202ENST00000419181 ZNF702PQ9H963 129 aa16.31■□□□□ 0.2
GTF3A-202ENST00000419181 AMMECR1Q9Y4X0 333 aaPredicted RBP16.31■□□□□ 0.2
GTF3A-202ENST00000419181 WNK1Q9H4A3 2382 aa16.31■□□□□ 0.2
GTF3A-202ENST00000419181 VWFP04275 2813 aa16.3■□□□□ 0.2
GTF3A-202ENST00000419181 OOSP1A8MZH6 123 aa16.3■□□□□ 0.2
GTF3A-202ENST00000419181 H3BUI4 141 aa16.3■□□□□ 0.2
GTF3A-202ENST00000419181 PDCD6O75340 191 aa16.3■□□□□ 0.2
GTF3A-202ENST00000419181 CA11O75493 328 aa16.3■□□□□ 0.2
GTF3A-202ENST00000419181 SSX1Q16384 188 aa16.3■□□□□ 0.2
GTF3A-202ENST00000419181 OR10K2Q6IF99 312 aa16.3■□□□□ 0.2
GTF3A-202ENST00000419181 OR52M1Q8NGK5 317 aa16.3■□□□□ 0.2
GTF3A-202ENST00000419181 ARL11Q969Q4 196 aa16.3■□□□□ 0.2
GTF3A-202ENST00000419181 CYYR1Q96J86 154 aa16.3■□□□□ 0.2
GTF3A-202ENST00000419181 Q9H521 79 aa16.3■□□□□ 0.2
GTF3A-202ENST00000419181 MRPS14O60783 128 aaKnown RBP16.29■□□□□ 0.2
GTF3A-202ENST00000419181 CD24P25063 80 aa16.29■□□□□ 0.2
GTF3A-202ENST00000419181 GNG10P50151 68 aa16.29■□□□□ 0.2
GTF3A-202ENST00000419181 RPS27AP62979 156 aaKnown RBP16.29■□□□□ 0.2
GTF3A-202ENST00000419181 QRFPP83859 136 aa16.29■□□□□ 0.2
GTF3A-202ENST00000419181 EMX1Q04741 257 aaPredicted RBP16.29■□□□□ 0.2
GTF3A-202ENST00000419181 UNC119Q13432 240 aa16.29■□□□□ 0.2
GTF3A-202ENST00000419181 SYT6Q5T7P8 510 aaPredicted RBP16.29■□□□□ 0.2
GTF3A-202ENST00000419181 CCDC144NLQ6NUI1 221 aa16.29■□□□□ 0.2
GTF3A-202ENST00000419181 OR4K15Q8NH41 348 aa16.29■□□□□ 0.2
GTF3A-202ENST00000419181 KCNG3Q8TAE7 436 aa16.29■□□□□ 0.2
GTF3A-202ENST00000419181 UBALD1Q8TB05 177 aa16.29■□□□□ 0.2
GTF3A-202ENST00000419181 TMEM59Q9BXS4 323 aa16.29■□□□□ 0.2
GTF3A-202ENST00000419181 KCNK15Q9H427 330 aa16.29■□□□□ 0.2
GTF3A-202ENST00000419181 TRAPPC2LQ9UL33 140 aa16.29■□□□□ 0.2
GTF3A-202ENST00000419181 UBE2QL1A1L167 161 aa16.28■□□□□ 0.2
GTF3A-202ENST00000419181 TMEM14DPA8MWL7 114 aa16.28■□□□□ 0.2
GTF3A-202ENST00000419181 C12orf77C9JDV5 145 aa16.28■□□□□ 0.2
GTF3A-202ENST00000419181 SLC17A2O00624 439 aa16.28■□□□□ 0.2
GTF3A-202ENST00000419181 BPNT1O95861 308 aa16.28■□□□□ 0.2
GTF3A-202ENST00000419181 CALRP27797 417 aaKnown RBP16.28■□□□□ 0.2
GTF3A-202ENST00000419181 LOXL3P58215 753 aa16.28■□□□□ 0.2
GTF3A-202ENST00000419181 MADCAM1Q13477 382 aa16.28■□□□□ 0.2
GTF3A-202ENST00000419181 FBLN7Q53RD9 439 aa16.28■□□□□ 0.2
GTF3A-202ENST00000419181 TOMM40LQ969M1 308 aa16.28■□□□□ 0.2
GTF3A-202ENST00000419181 RPEQ96AT9 228 aa16.28■□□□□ 0.2
GTF3A-202ENST00000419181 TM2D1Q9BX74 207 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms