RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 ABHD3Q8WU67 409 aa12.32□□□□□ -0.44
COL4A3-202ENST00000396578 CD300CQ08708 224 aa12.32□□□□□ -0.44
COL4A3-202ENST00000396578 SMAD4Q13485 552 aaKnown RBP12.32□□□□□ -0.44
COL4A3-202ENST00000396578 LDLRAD3Q86YD5 345 aa12.32□□□□□ -0.44
COL4A3-202ENST00000396578 LRRC3BQ96PB8 259 aa12.32□□□□□ -0.44
COL4A3-202ENST00000396578 PCOLCE2Q9UKZ9 415 aa12.32□□□□□ -0.44
COL4A3-202ENST00000396578 ADAD2Q8NCV1 583 aaKnown RBP12.32□□□□□ -0.44
COL4A3-202ENST00000396578 MRGPRFQ96AM1 343 aa12.32□□□□□ -0.44
COL4A3-202ENST00000396578 COMPP49747 757 aaPredicted RBP12.32□□□□□ -0.44
COL4A3-202ENST00000396578 ZNF137PP52743 207 aa12.32□□□□□ -0.44
COL4A3-202ENST00000396578 LHFPL5Q8TAF8 219 aa12.32□□□□□ -0.44
COL4A3-202ENST00000396578 MRGPRX3Q96LB0 322 aa12.32□□□□□ -0.44
COL4A3-202ENST00000396578 C1RLQ9NZP8 487 aa12.32□□□□□ -0.44
COL4A3-202ENST00000396578 SIAH2O43255 324 aa12.32□□□□□ -0.44
COL4A3-202ENST00000396578 MTURNQ8N3F0 131 aa12.32□□□□□ -0.44
COL4A3-202ENST00000396578 FRRS1LQ9P0K9 344 aa12.32□□□□□ -0.44
COL4A3-202ENST00000396578 B4GALNT1Q00973 533 aa12.32□□□□□ -0.44
COL4A3-202ENST00000396578 PWWP2BQ6NUJ5 590 aa12.32□□□□□ -0.44
COL4A3-202ENST00000396578 F2RL2O00254 374 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 HMGA2P52926 109 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 METAP1P53582 386 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 MRPL58Q14197 206 aaKnown RBP12.31□□□□□ -0.44
COL4A3-202ENST00000396578 RGP1Q92546 391 aaPredicted RBP12.31□□□□□ -0.44
COL4A3-202ENST00000396578 SAP30LQ9HAJ7 183 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 SKP2Q13309 424 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 SMUG1Q53HV7 270 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 SPOCK3Q9BQ16 436 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 ARRDC1-AS1Q9H2J1 176 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 UQCRFS1P47985 274 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 RBM38Q9H0Z9 239 aaKnown RBP12.31□□□□□ -0.44
COL4A3-202ENST00000396578 PLA2G3Q9NZ20 509 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 OR2W1Q9Y3N9 320 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 CXorf51AA0A1B0GTR3 108 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 MPZL1O95297 269 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 PMELP40967 661 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 ANKRD37Q7Z713 158 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 IL19Q9UHD0 177 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 MRM2Q9UI43 246 aaKnown RBP12.31□□□□□ -0.44
COL4A3-202ENST00000396578 UBE2L6O14933 153 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 SOCS1O15524 211 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 ZNF324O75467 553 aaPredicted RBP12.31□□□□□ -0.44
COL4A3-202ENST00000396578 MMP9P14780 707 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 RTP5Q14D33 572 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 OIT3Q8WWZ8 545 aa12.31□□□□□ -0.44
COL4A3-202ENST00000396578 UBALD2Q8IYN6 164 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 H1FOOQ8IZA3 346 aaPredicted RBP12.3□□□□□ -0.44
COL4A3-202ENST00000396578 MUC15Q8N387 334 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 OR8B3Q8NGG8 313 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 OR8B2Q96RD0 313 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 KIAA1551Q9HCM1 1747 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 ATAD5Q96QE3 1844 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 TMEM211Q6ICI0 200 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 SGMS2Q8NHU3 365 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 RAB1CQ92928 201 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 ID1P41134 155 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 SSPNQ14714 243 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 DMKNQ6E0U4 476 aaPredicted RBP12.3□□□□□ -0.44
COL4A3-202ENST00000396578 MRPL30Q8TCC3 161 aaKnown RBP12.3□□□□□ -0.44
COL4A3-202ENST00000396578 OGG1O15527 345 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 CDS2O95674 445 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 TMEM50BP56557 158 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 FAM222BQ8WU58 562 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 EID2BQ96D98 161 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 OR2V2Q96R30 315 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 TMUB1Q9BVT8 246 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 KLK10O43240 276 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 LMX1BO60663 402 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 SLC23A3Q6PIS1 610 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 RCC2Q9P258 522 aaKnown RBP12.3□□□□□ -0.44
COL4A3-202ENST00000396578 IGKV3-7A0A075B6H7 116 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 KCNE1BA0A087WTH5 132 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 AESQ08117 197 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 TRA2AQ13595 282 aaKnown RBP eCLIP12.3□□□□□ -0.44
COL4A3-202ENST00000396578 THSD4Q6ZMP0 1018 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 INSIG2Q9Y5U4 225 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 ZNF98A6NK75 572 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 SEC11BP0C7V7 166 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 LSM6P62312 80 aaKnown RBP12.3□□□□□ -0.44
COL4A3-202ENST00000396578 RTN4RL1Q86UN2 441 aaPredicted RBP12.3□□□□□ -0.44
COL4A3-202ENST00000396578 DYNLRB2Q8TF09 96 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 HARBI1Q96MB7 349 aa12.3□□□□□ -0.44
COL4A3-202ENST00000396578 SPTY2D1-AS1A0A0U1RR47 76 aa12.29□□□□□ -0.44
COL4A3-202ENST00000396578 PTX4Q96A99 478 aa12.29□□□□□ -0.44
COL4A3-202ENST00000396578 ZG16BQ96DA0 208 aa12.29□□□□□ -0.44
COL4A3-202ENST00000396578 HIST1H4GQ99525 98 aa12.29□□□□□ -0.44
COL4A3-202ENST00000396578 ZBTB34Q8NCN2 500 aa12.29□□□□□ -0.44
COL4A3-202ENST00000396578 CDX2Q99626 313 aaPredicted RBP12.29□□□□□ -0.44
COL4A3-202ENST00000396578 HSPB9Q9BQS6 159 aa12.29□□□□□ -0.44
COL4A3-202ENST00000396578 PARD6GQ9BYG4 376 aaPredicted RBP12.29□□□□□ -0.44
COL4A3-202ENST00000396578 HBZP02008 142 aa12.29□□□□□ -0.44
COL4A3-202ENST00000396578 PMCHL1Q16048 86 aa12.29□□□□□ -0.44
COL4A3-202ENST00000396578 RGPD4Q7Z3J3 1758 aa12.29□□□□□ -0.44
COL4A3-202ENST00000396578 NKX2-6A6NCS4 301 aa12.29□□□□□ -0.44
COL4A3-202ENST00000396578 RNASE1P07998 156 aaKnown RBP12.29□□□□□ -0.44
COL4A3-202ENST00000396578 MFAP2P55001 183 aa12.29□□□□□ -0.44
COL4A3-202ENST00000396578 C19orf54Q5BKX5 351 aa12.29□□□□□ -0.44
COL4A3-202ENST00000396578 MS4A7Q9GZW8 240 aaPredicted RBP12.29□□□□□ -0.44
COL4A3-202ENST00000396578 SLC52A3Q9NQ40 469 aa12.29□□□□□ -0.44
COL4A3-202ENST00000396578 FER1L5A0AVI2 2057 aa12.29□□□□□ -0.44
COL4A3-202ENST00000396578 DOCK11Q5JSL3 2073 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms