RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 C14orf79Q96F83 325 aa16.98■□□□□ 0.31
VCPKMT-202ENST00000395860 ZNF2Q9BSG1 426 aaPredicted RBP16.98■□□□□ 0.31
VCPKMT-202ENST00000395860 TAF9BQ9HBM6 251 aa16.98■□□□□ 0.31
VCPKMT-202ENST00000395860 KAAG1Q9UBP8 84 aa16.98■□□□□ 0.31
VCPKMT-202ENST00000395860 DSCAML1Q8TD84 2053 aa16.98■□□□□ 0.31
VCPKMT-202ENST00000395860 NDUFB3O43676 98 aa16.97■□□□□ 0.31
VCPKMT-202ENST00000395860 CTXN2P0C2S0 81 aa16.97■□□□□ 0.31
VCPKMT-202ENST00000395860 NDUFB7P17568 137 aa16.97■□□□□ 0.31
VCPKMT-202ENST00000395860 TMEM33P57088 247 aa16.97■□□□□ 0.31
VCPKMT-202ENST00000395860 HMGN3Q15651 99 aa16.97■□□□□ 0.31
VCPKMT-202ENST00000395860 OR13A1Q8NGR1 328 aa16.97■□□□□ 0.31
VCPKMT-202ENST00000395860 KIRREL1Q96J84 757 aa16.97■□□□□ 0.31
VCPKMT-202ENST00000395860 BET1O15155 118 aa16.97■□□□□ 0.31
VCPKMT-202ENST00000395860 HERPUD1Q15011 391 aa16.97■□□□□ 0.31
VCPKMT-202ENST00000395860 LRRC10Q5BKY1 277 aa16.97■□□□□ 0.31
VCPKMT-202ENST00000395860 TRAT1Q6PIZ9 186 aa16.97■□□□□ 0.31
VCPKMT-202ENST00000395860 IL1F10Q8WWZ1 152 aa16.97■□□□□ 0.31
VCPKMT-202ENST00000395860 DHFRP00374 187 aa16.96■□□□□ 0.31
VCPKMT-202ENST00000395860 RLN1P04808 185 aa16.96■□□□□ 0.31
VCPKMT-202ENST00000395860 FCGR2CP31995 323 aa16.96■□□□□ 0.31
VCPKMT-202ENST00000395860 DHRS11Q6UWP2 260 aa16.96■□□□□ 0.31
VCPKMT-202ENST00000395860 LHFPL1Q86WI0 220 aa16.96■□□□□ 0.31
VCPKMT-202ENST00000395860 FGFRL1Q8N441 504 aa16.96■□□□□ 0.31
VCPKMT-202ENST00000395860 ZNF565Q8N9K5 539 aa16.96■□□□□ 0.31
VCPKMT-202ENST00000395860 MRGPRFQ96AM1 343 aa16.96■□□□□ 0.31
VCPKMT-202ENST00000395860 LURAP1Q96LR2 239 aa16.96■□□□□ 0.31
VCPKMT-202ENST00000395860 DCTN5Q9BTE1 182 aa16.96■□□□□ 0.31
VCPKMT-202ENST00000395860 TMPRSS13Q9BYE2 586 aa16.96■□□□□ 0.31
VCPKMT-202ENST00000395860 NCOR1P1Q9H4R4 102 aa16.96■□□□□ 0.31
VCPKMT-202ENST00000395860 CTSZQ9UBR2 303 aa16.96■□□□□ 0.31
VCPKMT-202ENST00000395860 PCDHB10Q9UN67 800 aa16.96■□□□□ 0.31
VCPKMT-202ENST00000395860 UTP20O75691 2785 aaKnown RBP16.96■□□□□ 0.31
VCPKMT-202ENST00000395860 DCHS2Q6V1P9 2916 aa16.95■□□□□ 0.3
VCPKMT-202ENST00000395860 IGKV1-6A0A0C4DH72 117 aa16.95■□□□□ 0.3
VCPKMT-202ENST00000395860 C12orf77C9JDV5 145 aa16.95■□□□□ 0.3
VCPKMT-202ENST00000395860 RAG2P55895 527 aa16.95■□□□□ 0.3
VCPKMT-202ENST00000395860 ZNF660Q6AZW8 331 aaPredicted RBP16.95■□□□□ 0.3
VCPKMT-202ENST00000395860 UBALD1Q8TB05 177 aa16.95■□□□□ 0.3
VCPKMT-202ENST00000395860 CABLES2Q9BTV7 478 aa16.95■□□□□ 0.3
VCPKMT-202ENST00000395860 OR6C3Q9NZP0 311 aa16.95■□□□□ 0.3
VCPKMT-202ENST00000395860 LRRK2Q5S007 2527 aa16.95■□□□□ 0.3
VCPKMT-202ENST00000395860 MEX3AA1L020 520 aaKnown RBP16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 OR5H14A6NHG9 310 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 CEACAM18A8MTB9 384 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 DVL1O14640 695 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 PEX14O75381 377 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 NFYAP23511 347 aaPredicted RBP16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 GPR6P46095 362 aaPredicted RBP16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 NPY4RP50391 375 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 TATDN3Q17R31 274 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 TMEM155Q4W5P6 130 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 AADACL3Q5VUY0 350 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 OR10J5Q8NHC4 309 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 MARCH1Q8TCQ1 289 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 GIMAP1Q8WWP7 306 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 LIME1Q9H400 295 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 USF3Q68DE3 2245 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 IGHV4-39P01824 125 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 GZMHP20718 246 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 ZNF554Q86TJ5 538 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 ZDHHC22Q8N966 263 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 ARL11Q969Q4 196 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 GALMQ96C23 342 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 PSMG3-AS1Q96PY0 264 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 BEX2Q9BXY8 128 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 BEX1Q9HBH7 125 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 SLC23A1Q9UHI7 598 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 VSIG4Q9Y279 399 aa16.94■□□□□ 0.3
VCPKMT-202ENST00000395860 TRBV6-7A0A0A0MS04 114 aa16.93■□□□□ 0.3
VCPKMT-202ENST00000395860 A0A0B4J293 547 aa16.93■□□□□ 0.3
VCPKMT-202ENST00000395860 HBZP02008 142 aa16.93■□□□□ 0.3
VCPKMT-202ENST00000395860 RPS2P15880 293 aaKnown RBP16.93■□□□□ 0.3
VCPKMT-202ENST00000395860 IL2RGP31785 369 aa16.93■□□□□ 0.3
VCPKMT-202ENST00000395860 SSTR5P35346 364 aa16.93■□□□□ 0.3
VCPKMT-202ENST00000395860 ECI1P42126 302 aa16.93■□□□□ 0.3
VCPKMT-202ENST00000395860 CR1LQ2VPA4 569 aa16.93■□□□□ 0.3
VCPKMT-202ENST00000395860 SPICQ8N5J4 248 aa16.93■□□□□ 0.3
VCPKMT-202ENST00000395860 OR1L1Q8NH94 360 aa16.93■□□□□ 0.3
VCPKMT-202ENST00000395860 SCGB3A2Q96PL1 93 aa16.93■□□□□ 0.3
VCPKMT-202ENST00000395860 MIOXQ9UGB7 285 aa16.93■□□□□ 0.3
VCPKMT-202ENST00000395860 TRGV10A0A0A0MS01 117 aa16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 SPINT2O43291 252 aa16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 HSPA12AO43301 675 aa16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 FCN3O75636 299 aa16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 DIRAS3O95661 229 aa16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 ANXA7P20073 488 aaKnown RBP16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 FPR2P25090 351 aa16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 SSTR2P30874 369 aa16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 HERV-K104P61576 105 aa16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 ZNF787Q6DD87 383 aa16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 TMED4Q7Z7H5 227 aa16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 ZNF525Q8N782 197 aa16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 H1FXQ92522 213 aaKnown RBP16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 NRGNQ92686 78 aa16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 OPN4Q9UHM6 478 aa16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 PGAM2P15259 253 aa16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 AADACP22760 399 aa16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 FXYD4P59646 89 aa16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 NLRC3Q7RTR2 1065 aa16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 OR8B3Q8NGG8 313 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms