RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 ZNF343Q6P1L6 599 aa17.27■□□□□ 0.35
SHANK1-203ENST00000391813 RFLNBQ8N5W9 214 aa17.27■□□□□ 0.35
SHANK1-203ENST00000391813 SCCPDHQ8NBX0 429 aa17.27■□□□□ 0.35
SHANK1-203ENST00000391813 OR5D13Q8NGL4 314 aa17.27■□□□□ 0.35
SHANK1-203ENST00000391813 ADAT3Q96EY9 351 aaPredicted RBP17.27■□□□□ 0.35
SHANK1-203ENST00000391813 SUCLG1P53597 346 aaKnown RBP17.26■□□□□ 0.35
SHANK1-203ENST00000391813 TAS2R60P59551 318 aa17.26■□□□□ 0.35
SHANK1-203ENST00000391813 ACSM6Q6P461 480 aa17.26■□□□□ 0.35
SHANK1-203ENST00000391813 EGLN1Q9GZT9 426 aa17.26■□□□□ 0.35
SHANK1-203ENST00000391813 TECRQ9NZ01 308 aaKnown RBP17.26■□□□□ 0.35
SHANK1-203ENST00000391813 CAMPP49913 170 aa17.26■□□□□ 0.35
SHANK1-203ENST00000391813 RPS16P62249 146 aaKnown RBP17.26■□□□□ 0.35
SHANK1-203ENST00000391813 ZNF774Q6NX45 483 aa17.26■□□□□ 0.35
SHANK1-203ENST00000391813 OR2I1PQ8NGU4 316 aa17.26■□□□□ 0.35
SHANK1-203ENST00000391813 TMEM56Q96MV1 263 aa17.26■□□□□ 0.35
SHANK1-203ENST00000391813 CHST5Q9GZS9 411 aa17.26■□□□□ 0.35
SHANK1-203ENST00000391813 UQCR10Q9UDW1 63 aa17.26■□□□□ 0.35
SHANK1-203ENST00000391813 KLHDC2Q9Y2U9 406 aa17.26■□□□□ 0.35
SHANK1-203ENST00000391813 BGLAPP02818 100 aa17.26■□□□□ 0.35
SHANK1-203ENST00000391813 MEF2BQ02080 365 aaPredicted RBP17.26■□□□□ 0.35
SHANK1-203ENST00000391813 MAP1LC3CQ9BXW4 147 aa17.26■□□□□ 0.35
SHANK1-203ENST00000391813 TIMM9Q9Y5J7 89 aa17.26■□□□□ 0.35
SHANK1-203ENST00000391813 FOCADQ5VW36 1801 aa17.26■□□□□ 0.35
SHANK1-203ENST00000391813 TMEM50BP56557 158 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 APCDD1LQ8NCL9 501 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 DTD1Q8TEA8 209 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 TRPM7Q96QT4 1865 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 C1QL1O75973 258 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 PPOXP50336 477 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 PTPMT1Q8WUK0 201 aaPredicted RBP17.25■□□□□ 0.35
SHANK1-203ENST00000391813 CYR61O00622 381 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 UPK3AO75631 287 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 IER3P46695 156 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 SLC36A1Q7Z2H8 476 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 AQP3Q92482 292 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 TMEM204Q9BSN7 226 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 DEFB127Q9H1M4 99 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 SLC7A10Q9NS82 523 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 FAM87AP0C7U9 286 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 PNLIPP16233 465 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 KIR2DS2P43631 304 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 ATRAIDQ6UW56 229 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 OR10X1Q8NGY0 326 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 OR13G1Q8NGZ3 307 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 LPAR5Q9H1C0 372 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 CCDC88CQ9P219 2028 aa17.25■□□□□ 0.35
SHANK1-203ENST00000391813 FCGR3BO75015 233 aa17.24■□□□□ 0.35
SHANK1-203ENST00000391813 HSPB9Q9BQS6 159 aa17.24■□□□□ 0.35
SHANK1-203ENST00000391813 NUDT16L1Q9BRJ7 211 aaKnown RBP17.24■□□□□ 0.35
SHANK1-203ENST00000391813 SHISA3A0PJX4 238 aa17.24■□□□□ 0.35
SHANK1-203ENST00000391813 H0YL77 283 aa17.24■□□□□ 0.35
SHANK1-203ENST00000391813 PMCHL1Q16048 86 aa17.24■□□□□ 0.35
SHANK1-203ENST00000391813 TUBA4BQ9H853 241 aa17.24■□□□□ 0.35
SHANK1-203ENST00000391813 SHISA8B8ZZ34 492 aa17.24■□□□□ 0.35
SHANK1-203ENST00000391813 SLC25A5P05141 298 aaKnown RBP17.24■□□□□ 0.35
SHANK1-203ENST00000391813 TRGC1P0CF51 173 aa17.24■□□□□ 0.35
SHANK1-203ENST00000391813 GLIPR1P48060 266 aa17.24■□□□□ 0.35
SHANK1-203ENST00000391813 FAM219AQ8IW50 185 aa17.24■□□□□ 0.35
SHANK1-203ENST00000391813 TP53RKQ96S44 253 aa17.24■□□□□ 0.35
SHANK1-203ENST00000391813 BARX1Q9HBU1 254 aaPredicted RBP17.24■□□□□ 0.35
SHANK1-203ENST00000391813 CCL28Q9NRJ3 127 aa17.24■□□□□ 0.35
SHANK1-203ENST00000391813 PIPOXQ9P0Z9 390 aa17.24■□□□□ 0.35
SHANK1-203ENST00000391813 RP1P56715 2156 aa17.24■□□□□ 0.35
SHANK1-203ENST00000391813 IGHV3-64DA0A0J9YX35 117 aa17.24■□□□□ 0.35
SHANK1-203ENST00000391813 UCNP55089 124 aa17.24■□□□□ 0.35
SHANK1-203ENST00000391813 OR1L4Q8NGR5 311 aa17.24■□□□□ 0.35
SHANK1-203ENST00000391813 ZPLD1Q8TCW7 415 aa17.24■□□□□ 0.35
SHANK1-203ENST00000391813 WASHC3Q9Y3C0 194 aa17.24■□□□□ 0.35
SHANK1-203ENST00000391813 MPC1Q9Y5U8 109 aa17.24■□□□□ 0.35
SHANK1-203ENST00000391813 C21orf140B9A014 251 aa17.23■□□□□ 0.35
SHANK1-203ENST00000391813 DUSP2Q05923 314 aa17.23■□□□□ 0.35
SHANK1-203ENST00000391813 TRPM6Q9BX84 2022 aa17.23■□□□□ 0.35
SHANK1-203ENST00000391813 SPTA1P02549 2419 aa17.23■□□□□ 0.35
SHANK1-203ENST00000391813 LIPT2A6NK58 231 aa17.23■□□□□ 0.35
SHANK1-203ENST00000391813 DECR2Q9NUI1 292 aa17.23■□□□□ 0.35
SHANK1-203ENST00000391813 FAM157BP0CG42 384 aa17.23■□□□□ 0.35
SHANK1-203ENST00000391813 RND3P61587 244 aa17.23■□□□□ 0.35
SHANK1-203ENST00000391813 ZBTB34Q8NCN2 500 aa17.23■□□□□ 0.35
SHANK1-203ENST00000391813 OR2D2Q9H210 308 aa17.23■□□□□ 0.35
SHANK1-203ENST00000391813 GREB1LQ9C091 1923 aaPredicted RBP17.23■□□□□ 0.35
SHANK1-203ENST00000391813 ZDBF2Q9HCK1 2354 aa17.23■□□□□ 0.35
SHANK1-203ENST00000391813 CXorf1O96002 111 aa17.23■□□□□ 0.35
SHANK1-203ENST00000391813 MNX1P50219 401 aaPredicted RBP17.23■□□□□ 0.35
SHANK1-203ENST00000391813 BPIFA4PQ86YQ2 179 aa17.23■□□□□ 0.35
SHANK1-203ENST00000391813 BOD1Q96IK1 185 aa17.23■□□□□ 0.35
SHANK1-203ENST00000391813 SRD5A3Q9H8P0 318 aa17.23■□□□□ 0.35
SHANK1-203ENST00000391813 ISG15P05161 165 aa17.22■□□□□ 0.35
SHANK1-203ENST00000391813 CLEC3BP05452 202 aa17.22■□□□□ 0.35
SHANK1-203ENST00000391813 STAG3L2P0CL84 134 aa17.22■□□□□ 0.35
SHANK1-203ENST00000391813 MDKP21741 143 aaPredicted RBP17.22■□□□□ 0.35
SHANK1-203ENST00000391813 RAB7AP51149 207 aa17.22■□□□□ 0.35
SHANK1-203ENST00000391813 TGIF2LXQ8IUE1 241 aa17.22■□□□□ 0.35
SHANK1-203ENST00000391813 SOSTQ9BQB4 213 aa17.22■□□□□ 0.35
SHANK1-203ENST00000391813 OR1A1Q9P1Q5 309 aa17.22■□□□□ 0.35
SHANK1-203ENST00000391813 PROCRQ9UNN8 238 aa17.22■□□□□ 0.35
SHANK1-203ENST00000391813 OR2W1Q9Y3N9 320 aa17.22■□□□□ 0.35
SHANK1-203ENST00000391813 TRGV10A0A0A0MS01 117 aa17.22■□□□□ 0.35
SHANK1-203ENST00000391813 CA11O75493 328 aa17.22■□□□□ 0.35
SHANK1-203ENST00000391813 IGHV4-34P06331 123 aa17.22■□□□□ 0.35
SHANK1-203ENST00000391813 FUT5Q11128 374 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms