RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 FLI1Q01543 452 aaPredicted RBP15.23■□□□□ 0.03
TRAF3IP1-201ENST00000373327 SURF2Q15527 256 aaPredicted RBP15.23■□□□□ 0.03
TRAF3IP1-201ENST00000373327 TMEM100Q9NV29 134 aa15.23■□□□□ 0.03
TRAF3IP1-201ENST00000373327 ATRXP46100 2492 aa15.23■□□□□ 0.03
TRAF3IP1-201ENST00000373327 WIPF3A6NGB9 483 aa15.23■□□□□ 0.03
TRAF3IP1-201ENST00000373327 IRF2P14316 349 aa15.23■□□□□ 0.03
TRAF3IP1-201ENST00000373327 NKX6-1P78426 367 aaPredicted RBP15.23■□□□□ 0.03
TRAF3IP1-201ENST00000373327 PRAMEF5Q5TYX0 476 aa15.23■□□□□ 0.03
TRAF3IP1-201ENST00000373327 IGKV1-27A0A075B6S5 117 aa15.23■□□□□ 0.03
TRAF3IP1-201ENST00000373327 ATP6V0CP27449 155 aa15.23■□□□□ 0.03
TRAF3IP1-201ENST00000373327 PPP1CCP36873 323 aaKnown RBP15.23■□□□□ 0.03
TRAF3IP1-201ENST00000373327 MPV17LQ2QL34 196 aa15.23■□□□□ 0.03
TRAF3IP1-201ENST00000373327 ZNF787Q6DD87 383 aa15.23■□□□□ 0.03
TRAF3IP1-201ENST00000373327 PNRC2Q9NPJ4 139 aaKnown RBP15.23■□□□□ 0.03
TRAF3IP1-201ENST00000373327 HGFACQ04756 655 aa15.22■□□□□ 0.03
TRAF3IP1-201ENST00000373327 UQCC3Q6UW78 93 aa15.22■□□□□ 0.03
TRAF3IP1-201ENST00000373327 POC1AQ8NBT0 407 aa15.22■□□□□ 0.03
TRAF3IP1-201ENST00000373327 GTF3C1Q12789 2109 aa15.22■□□□□ 0.03
TRAF3IP1-201ENST00000373327 CRYM-AS1A6NIL9 109 aa15.22■□□□□ 0.03
TRAF3IP1-201ENST00000373327 SPP1P10451 314 aa15.22■□□□□ 0.03
TRAF3IP1-201ENST00000373327 SUPT4H1P63272 117 aaKnown RBP15.22■□□□□ 0.03
TRAF3IP1-201ENST00000373327 Q3ZCU0 254 aa15.22■□□□□ 0.03
TRAF3IP1-201ENST00000373327 GLRX5Q86SX6 157 aa15.22■□□□□ 0.03
TRAF3IP1-201ENST00000373327 BSCL2Q96G97 398 aaPredicted RBP15.22■□□□□ 0.03
TRAF3IP1-201ENST00000373327 TRDCB7Z8K6 153 aa15.22■□□□□ 0.03
TRAF3IP1-201ENST00000373327 IL2RAP01589 272 aa15.22■□□□□ 0.03
TRAF3IP1-201ENST00000373327 NDUFB7P17568 137 aa15.22■□□□□ 0.03
TRAF3IP1-201ENST00000373327 DTYMKP23919 212 aa15.22■□□□□ 0.03
TRAF3IP1-201ENST00000373327 Q0VFX4 171 aa15.22■□□□□ 0.03
TRAF3IP1-201ENST00000373327 RNPS1Q15287 305 aaKnown RBP15.22■□□□□ 0.03
TRAF3IP1-201ENST00000373327 OR1A1Q9P1Q5 309 aa15.22■□□□□ 0.03
TRAF3IP1-201ENST00000373327 GAB2Q9UQC2 676 aa15.22■□□□□ 0.03
TRAF3IP1-201ENST00000373327 F8VVB4 439 aa15.21■□□□□ 0.03
TRAF3IP1-201ENST00000373327 F8VWA3 439 aa15.21■□□□□ 0.03
TRAF3IP1-201ENST00000373327 SRSF10O75494 262 aaKnown RBP15.21■□□□□ 0.03
TRAF3IP1-201ENST00000373327 DEDDO75618 318 aa15.21■□□□□ 0.03
TRAF3IP1-201ENST00000373327 GALMQ96C23 342 aa15.21■□□□□ 0.03
TRAF3IP1-201ENST00000373327 SPG11Q96JI7 2443 aa15.21■□□□□ 0.03
TRAF3IP1-201ENST00000373327 FBP1P09467 338 aa15.21■□□□□ 0.03
TRAF3IP1-201ENST00000373327 SLC25A53Q5H9E4 307 aa15.21■□□□□ 0.03
TRAF3IP1-201ENST00000373327 SLC16A13Q7RTY0 426 aa15.21■□□□□ 0.03
TRAF3IP1-201ENST00000373327 ZNF391Q9UJN7 358 aa15.21■□□□□ 0.03
TRAF3IP1-201ENST00000373327 C7orf77A4D0Y5 90 aa15.21■□□□□ 0.03
TRAF3IP1-201ENST00000373327 A8MXK9 166 aa15.21■□□□□ 0.03
TRAF3IP1-201ENST00000373327 RPL36A-HNRNPH2H7BZ11 118 aa15.21■□□□□ 0.03
TRAF3IP1-201ENST00000373327 SPINT2O43291 252 aa15.21■□□□□ 0.03
TRAF3IP1-201ENST00000373327 MDKP21741 143 aaPredicted RBP15.21■□□□□ 0.03
TRAF3IP1-201ENST00000373327 S100PP25815 95 aa15.21■□□□□ 0.03
TRAF3IP1-201ENST00000373327 ZNF818PQ6ZRF7 136 aa15.21■□□□□ 0.03
TRAF3IP1-201ENST00000373327 H1FXQ92522 213 aaKnown RBP15.21■□□□□ 0.03
TRAF3IP1-201ENST00000373327 RSG1Q9BU20 258 aa15.21■□□□□ 0.03
TRAF3IP1-201ENST00000373327 A0A1W2PPE3 182 aa15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 B4E171 279 aa15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 DFFBO76075 338 aa15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 TSPAN7P41732 249 aa15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 EIF2S3LQ2VIR3 472 aaKnown RBP15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 FAM185AQ8N0U4 392 aa15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 OR4A16Q8NH70 328 aa15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 PPP1R35Q8TAP8 253 aa15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 NABP1Q96AH0 204 aa15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 SLC25A22Q9H936 323 aa15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 TAAR3PQ9P1P4 343 aa15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 WSB1Q9Y6I7 421 aa15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 PROB1E7EW31 1015 aa15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 USF2Q15853 346 aaPredicted RBP15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 TECTAO75443 2155 aa15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 ZGRF1Q86YA3 2104 aa15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 LRP5LA4QPB2 252 aa15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 ZNF727A8MUV8 499 aa15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 LOC105371267A0A1B0GV96 52 aa15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 ZNF385CQ66K41 422 aaPredicted RBP15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 TMEM211Q6ICI0 200 aa15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 HPSE2Q8WWQ2 592 aa15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 V9GYS6 101 aa15.2■□□□□ 0.02
TRAF3IP1-201ENST00000373327 INTS1Q8N201 2190 aaKnown RBP15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 hCG_38984A0A1B0GV85 526 aa15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 CELA3BP08861 270 aa15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 VDAC1P21796 283 aa15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 PMELP40967 661 aa15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 GPR12P47775 334 aa15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 HOXA1P49639 335 aaPredicted RBP15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 RAB4BP61018 213 aa15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 FBXW9Q5XUX1 488 aa15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 C10orf35Q96D05 121 aa15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 RARRES2Q99969 163 aa15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 AURKAIP1Q9NWT8 199 aaPredicted RBP15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 NDRG3Q9UGV2 375 aa15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 TIMM8BQ9Y5J9 83 aaPredicted RBP15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 IGHV3OR15-7A0A075B7D8 119 aa15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 LY6G6EA0A0G2JKS1 128 aa15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 C9orf172C9J069 976 aa15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 CYB5BO43169 146 aa15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 ZNF718Q3SXZ3 478 aa15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 GNPNAT1Q96EK6 184 aaPredicted RBP15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 U3KQA8 63 aa15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 OR5H1A6NKK0 313 aa15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 HBE1P02100 147 aa15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 OR4F5Q8NH21 305 aa15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 OR4F4Q96R69 305 aa15.19■□□□□ 0.02
TRAF3IP1-201ENST00000373327 PROCRQ9UNN8 238 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms