RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 ZMAT3Q9HA38 289 aaKnown RBP8.81□□□□□ -1
COL5A1-202ENST00000371820 YAE1D1Q9NRH1 226 aa8.81□□□□□ -1
COL5A1-202ENST00000371820 ASH2LQ9UBL3 628 aa8.81□□□□□ -1
COL5A1-202ENST00000371820 A0A096LNT2 108 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 IGKV1D-43A0A0B4J1Z2 117 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 ATG12O94817 140 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 CST4P01036 141 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 CST2P09228 141 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 BLVRBP30043 206 aaPredicted RBP8.8□□□□□ -1
COL5A1-202ENST00000371820 RAB5CP51148 216 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 SNU13P55769 128 aaKnown RBP8.8□□□□□ -1
COL5A1-202ENST00000371820 TMEM50BP56557 158 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 DEFA5Q01523 94 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 PJVKQ0ZLH3 352 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 TMEM249Q2WGJ8 235 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 PABPC1L2AQ5JQF8 200 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 C10orf91Q5T1B1 145 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 GPR157Q5UAW9 335 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 CFAP77Q6ZQR2 320 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 LHFPL2Q6ZUX7 228 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 FAM57BQ71RH2 274 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 LRRC18Q8N456 261 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 GVQW1Q8N7I0 195 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 SEMA6DQ8NFY4 1073 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 PCNPQ8WW12 178 aaKnown RBP8.8□□□□□ -1
COL5A1-202ENST00000371820 FAM71F1Q96KD3 344 aaPredicted RBP8.8□□□□□ -1
COL5A1-202ENST00000371820 TSNAXQ99598 290 aaKnown RBP8.8□□□□□ -1
COL5A1-202ENST00000371820 ZNF416Q9BWM5 594 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 SUCNR1Q9BXA5 334 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 PECRQ9BY49 303 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 CHST5Q9GZS9 411 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 KCNK15Q9H427 330 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 SMDT1Q9H4I9 107 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 DECR2Q9NUI1 292 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 NECAP2Q9NVZ3 263 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 PURGQ9UJV8 347 aaKnown RBP8.8□□□□□ -1
COL5A1-202ENST00000371820 SLC7A11Q9UPY5 501 aa8.8□□□□□ -1
COL5A1-202ENST00000371820 CARHSP1Q9Y2V2 147 aaKnown RBP8.8□□□□□ -1
COL5A1-202ENST00000371820 CUBNO60494 3623 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 BORCS7-ASMTA0A0B4J1R7 106 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 POM121CA8CG34 1229 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 RNF212BA8MTL3 300 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 LGALS8O00214 317 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 SOCS1O15524 211 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 SCO1O75880 301 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 H2AFB1P0C5Y9 115 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 PATE4P0C8F1 98 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 DAOP14920 347 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 PGAM2P15259 253 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 OTX1P32242 354 aaPredicted RBP8.79□□□□□ -1
COL5A1-202ENST00000371820 UCP3P55916 312 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 SRPXP78539 464 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 FAM3AP98173 230 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 OR8B8Q15620 311 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 SRSF7Q16629 238 aaKnown RBP eCLIP8.79□□□□□ -1
COL5A1-202ENST00000371820 LRRC37A5PQ49AS3 106 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 CYB5R2Q6BCY4 276 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 OR52W1Q6IF63 320 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 DHRS11Q6UWP2 260 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 ASCL4Q6XD76 172 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 FAM185AQ8N0U4 392 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.79□□□□□ -1
COL5A1-202ENST00000371820 CCDC71LQ8N9Z2 235 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 ADAD2Q8NCV1 583 aaKnown RBP8.79□□□□□ -1
COL5A1-202ENST00000371820 FGFBP3Q8TAT2 258 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 ARHGAP5-AS1Q96IT6 56 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 C1orf147Q96MC9 270 aaPredicted RBP8.79□□□□□ -1
COL5A1-202ENST00000371820 RNF126Q9BV68 326 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 MRPL37Q9BZE1 423 aaKnown RBP8.79□□□□□ -1
COL5A1-202ENST00000371820 PNRC2Q9NPJ4 139 aaKnown RBP8.79□□□□□ -1
COL5A1-202ENST00000371820 PLEKHJ1Q9NW61 149 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 EHFQ9NZC4 300 aa8.79□□□□□ -1
COL5A1-202ENST00000371820 MYEF2Q9P2K5 600 aaKnown RBP8.79□□□□□ -1
COL5A1-202ENST00000371820 FAM90A10PA6NDY2 464 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 FAM90A18PA6NE21 464 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 FAM90A16PA6NEW6 464 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 FAM90A20PA6NIJ5 464 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 FAM90A8PA6NJQ4 464 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 FAM90A7PA6NKC0 464 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 FOXI3A8MTJ6 420 aaPredicted RBP8.78□□□□□ -1
COL5A1-202ENST00000371820 FAM90A22PA8MWA6 464 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 FAM90A12PA8MX19 464 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 FAM90A5PA8MXJ8 464 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 FAM90A23PA8MXZ1 464 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 VWC2LB2RUY7 222 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 E5RGE8 158 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 M0R135 149 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 LMX1BO60663 402 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 LY6HO94772 140 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 MMP7P09237 267 aaPredicted RBP8.78□□□□□ -1
COL5A1-202ENST00000371820 FAM90A15PP0C7V4 464 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 FAM90A13PP0C7W8 464 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 FAM90A14PP0C7W9 464 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 FAM90A24PP0C7X0 464 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 ZNF32P17041 273 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 RBP2P50120 134 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 FUT6P51993 359 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 KLF3P57682 345 aaPredicted RBP8.78□□□□□ -1
COL5A1-202ENST00000371820 SLC22A6Q4U2R8 563 aa8.78□□□□□ -1
COL5A1-202ENST00000371820 FAM71E2Q8N5Q1 922 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms