RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 FIP1L1Q6UN15 594 aaKnown RBP15.43■□□□□ 0.06
USP39-201ENST00000323701 LILRB1Q8NHL6 650 aaPredicted RBP15.43■□□□□ 0.06
USP39-201ENST00000323701 SEC22AQ96IW7 307 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 SCGB3A2Q96PL1 93 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 GPHA2Q96T91 129 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 NGBQ9NPG2 151 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 OR1A1Q9P1Q5 309 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 WIPI2Q9Y4P8 454 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 DYSFO75923 2080 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 KIR2DS1A0A191URI9 304 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 SSTR2P30874 369 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 PRDX2P32119 198 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 CD80P33681 288 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 SERPINF1P36955 418 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 MDH2P40926 338 aaKnown RBP15.43■□□□□ 0.06
USP39-201ENST00000323701 KIR2DS4P43632 304 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 HLA-DRB3P79483 266 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 KIR2DS1Q14954 304 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 PHLDA2Q53GA4 152 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 FAM53AQ6NSI3 398 aaPredicted RBP15.43■□□□□ 0.06
USP39-201ENST00000323701 TEX261Q6UWH6 196 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 OR5M8Q8NGP6 311 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 OR10Z1Q8NGY1 313 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 IL1F10Q8WWZ1 152 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 PHB2Q99623 299 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 KCNJ16Q9NPI9 418 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 KIF25Q9UIL4 384 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 TRAPPC2LQ9UL33 140 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 ZDHHC8Q9ULC8 765 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 C14orf166Q9Y224 244 aaKnown RBP15.43■□□□□ 0.06
USP39-201ENST00000323701 U3KQ87 197 aa15.43■□□□□ 0.06
USP39-201ENST00000323701 C17orf100A8MU93 164 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 ZNF737O75373 536 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 GLP1RP43220 463 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 PIGPP57054 158 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 MBNL3Q9NUK0 354 aaKnown RBP15.42■□□□□ 0.06
USP39-201ENST00000323701 NDRG3Q9UGV2 375 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 A0A1B0GW55 424 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 MPTX1A8MV57 137 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 ADAP1O75689 374 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 TUSC2O75896 110 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 DUX4L2P0CJ85 424 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 DUX4L3P0CJ86 424 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 DUX4L4P0CJ87 422 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 DUX4L5P0CJ88 424 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 DUX4L6P0CJ89 424 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 DUX4L7P0CJ90 424 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 SELLP14151 372 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 GLIPR1P48060 266 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 RAP2BP61225 183 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 MST1LQ2TV78 715 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 DUX4L9Q6RFH8 374 aaPredicted RBP15.42■□□□□ 0.06
USP39-201ENST00000323701 DCTN5Q9BTE1 182 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 PARP12Q9H0J9 701 aaKnown RBP15.42■□□□□ 0.06
USP39-201ENST00000323701 RASL12Q9NYN1 266 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 DUX4Q9UBX2 424 aa15.42■□□□□ 0.06
USP39-201ENST00000323701 HCFC1P51610 2035 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 TK1P04183 234 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 GNRHRP30968 328 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 TLE1Q04724 770 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 ZNRF1Q8ND25 227 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 ZNF680Q8NEM1 530 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 SLC2A9Q9NRM0 540 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 DNAJB11Q9UBS4 358 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 TRBV6-7A0A0A0MS04 114 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 TUBAL3A6NHL2 446 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 CRYM-AS1A6NIL9 109 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 IFNL4K9M1U5 179 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 ZG16O60844 167 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 MPC2O95563 127 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 CD3EP07766 207 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 GABRA2P47869 451 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 KCNJ3P48549 501 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 SP6Q3SY56 376 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 OR4A4PQ8NGN8 299 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 TAF9BQ9HBM6 251 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 GLS2Q9UI32 602 aa15.41■□□□□ 0.06
USP39-201ENST00000323701 DEFB108AA8MXU0 73 aa15.4■□□□□ 0.06
USP39-201ENST00000323701 FAM25EA8MYX2 175 aa15.4■□□□□ 0.06
USP39-201ENST00000323701 LOXP28300 417 aaPredicted RBP15.4■□□□□ 0.06
USP39-201ENST00000323701 ECI1P42126 302 aa15.4■□□□□ 0.06
USP39-201ENST00000323701 HERV-K104P61576 105 aa15.4■□□□□ 0.06
USP39-201ENST00000323701 SECTM1Q8WVN6 248 aa15.4■□□□□ 0.06
USP39-201ENST00000323701 CABLES2Q9BTV7 478 aa15.4■□□□□ 0.06
USP39-201ENST00000323701 RSRP1Q9BUV0 290 aa15.4■□□□□ 0.06
USP39-201ENST00000323701 RNF7Q9UBF6 113 aa15.4■□□□□ 0.06
USP39-201ENST00000323701 PPP1R3CQ9UQK1 317 aa15.4■□□□□ 0.06
USP39-201ENST00000323701 MAB21L2Q9Y586 359 aa15.4■□□□□ 0.06
USP39-201ENST00000323701 M0R233 179 aa15.39■□□□□ 0.05
USP39-201ENST00000323701 SHOXO15266 292 aa15.39■□□□□ 0.05
USP39-201ENST00000323701 HLA-GP17693 338 aa15.39■□□□□ 0.05
USP39-201ENST00000323701 AP2S1P53680 142 aaPredicted RBP15.39■□□□□ 0.05
USP39-201ENST00000323701 UCP3P55916 312 aa15.39■□□□□ 0.05
USP39-201ENST00000323701 ESCO2Q56NI9 601 aa15.39■□□□□ 0.05
USP39-201ENST00000323701 ZNF818PQ6ZRF7 136 aa15.39■□□□□ 0.05
USP39-201ENST00000323701 FAM90A1Q86YD7 464 aa15.39■□□□□ 0.05
USP39-201ENST00000323701 FAM219AQ8IW50 185 aa15.39■□□□□ 0.05
USP39-201ENST00000323701 DEFB108BQ8NET1 73 aa15.39■□□□□ 0.05
USP39-201ENST00000323701 RTN4IP1Q8WWV3 396 aaPredicted RBP15.39■□□□□ 0.05
USP39-201ENST00000323701 SPTAN1Q13813 2472 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms