RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 SHHQ15465 462 aa11.62□□□□□ -0.55
RPUSD4-201ENST00000298317 RSPO4Q2I0M5 234 aaPredicted RBP11.62□□□□□ -0.55
RPUSD4-201ENST00000298317 SNAI3Q3KNW1 292 aa11.62□□□□□ -0.55
RPUSD4-201ENST00000298317 TMEM211Q6ICI0 200 aa11.62□□□□□ -0.55
RPUSD4-201ENST00000298317 OR5B12Q96R08 314 aa11.62□□□□□ -0.55
RPUSD4-201ENST00000298317 SMIM7Q9BQ49 75 aa11.62□□□□□ -0.55
RPUSD4-201ENST00000298317 PCGF1Q9BSM1 259 aa11.62□□□□□ -0.55
RPUSD4-201ENST00000298317 PSMG3Q9BT73 122 aaPredicted RBP11.62□□□□□ -0.55
RPUSD4-201ENST00000298317 LRRC61Q9BV99 259 aa11.62□□□□□ -0.55
RPUSD4-201ENST00000298317 RBKSQ9H477 322 aa11.62□□□□□ -0.55
RPUSD4-201ENST00000298317 GSX1Q9H4S2 264 aaPredicted RBP11.62□□□□□ -0.55
RPUSD4-201ENST00000298317 IGKV1-12A0A0C4DH73 117 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 A0A1W2PNR3 127 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 H7BYZ3 331 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 M0R135 149 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 PDCD6O75340 191 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 KBTBD11O94819 623 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 HRASP01112 189 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 IGKV1D-12P01611 117 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 OPN1LWP04000 364 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 TYMSP04818 313 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 ZNF41P51814 821 aaPredicted RBP11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 RPL23P62829 140 aaKnown RBP11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 GNB2P62879 340 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 HIST1H3AP68431 136 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 MRPS34P82930 218 aaKnown RBP11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 RNPS1Q15287 305 aaKnown RBP11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 TMEM241Q24JQ0 296 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 BSXQ3C1V8 233 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 SLC25A24Q6NUK1 477 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 PARM1Q6UWI2 310 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 RNF138Q8WVD3 245 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 ZNF799Q96GE5 643 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 SLC7A10Q9NS82 523 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 FUT9Q9Y231 359 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 TCRBV21S2A2A0A5A6 115 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 IFNA1P01562 189 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 IGHV4-34P06331 123 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 ELLP55199 621 aaPredicted RBP11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 CNN3Q15417 329 aaKnown RBP11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 ZNF818PQ6ZRF7 136 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 TIPARPQ7Z3E1 657 aaKnown RBP11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 OSR2Q8N2R0 312 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 ELOVL1Q9BW60 279 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 REPIN1Q9BWE0 567 aaKnown RBP11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 GPR27Q9NS67 375 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 FKBP11Q9NYL4 201 aa11.61□□□□□ -0.55
RPUSD4-201ENST00000298317 TDRD6O60522 2096 aaKnown RBP11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 LILRA5A6NI73 299 aa11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 CST2P09228 141 aa11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 FBLP22087 321 aaKnown RBP11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 PRDX4Q13162 271 aa11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 WDR5BQ86VZ2 330 aa11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 SLC24A4Q8NFF2 622 aa11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 TMEM37Q8WXS4 190 aa11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 NABP1Q96AH0 204 aa11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 IL36GQ9NZH8 169 aa11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 SZT2Q5T011 3432 aa11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 PIAS2O75928 621 aa11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 CD82P27701 267 aa11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 TMEM267Q0VDI3 215 aaPredicted RBP11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 SPIN3Q5JUX0 258 aa11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 FOXL2NBQ6ZUU3 175 aa11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 LHFPL2Q6ZUX7 228 aa11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 GAPTQ8N292 157 aa11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 ZNF296Q8WUU4 475 aaPredicted RBP11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 IL22RA2Q969J5 263 aa11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 OR6C3Q9NZP0 311 aa11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 ST3GAL6Q9Y274 331 aa11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 VCANP13611 3396 aa11.6□□□□□ -0.55
RPUSD4-201ENST00000298317 MAP1LC3B2A6NCE7 125 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 H3BP45 60 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 BRS3P32247 399 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 MDH2P40926 338 aaKnown RBP11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 MALLQ13021 153 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 C10orf128Q5T292 105 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 CISD2Q8N5K1 135 aaKnown RBP11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 OR5D13Q8NGL4 314 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 SCGB1C1Q8TD33 95 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 PARD6GQ9BYG4 376 aaPredicted RBP11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 MAP1LC3BQ9GZQ8 125 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 DNAJC4Q9NNZ3 241 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 LOC102725191A0A1B0GVB3 256 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 LRRC3CA6NJW4 275 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 AQP7P3A6NL99 342 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 KIAA1324LA8MWY0 1029 aaPredicted RBP11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 TLX3O43711 291 aaPredicted RBP11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 SCGB1D1O95968 90 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 TCN2P20062 427 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 SERF2P84101 59 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 MEF2BQ02080 365 aaPredicted RBP11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 DAZAP2Q15038 168 aaPredicted RBP11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 PRSS8Q16651 343 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 BTNL3Q6UXE8 466 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 Q6ZS49 121 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 BORCS8Q96FH0 119 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 GPHA2Q96T91 129 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 NAGKQ9UJ70 344 aa11.59□□□□□ -0.55
RPUSD4-201ENST00000298317 IGHV3-20A0A0C4DH32 117 aa11.58□□□□□ -0.56
RPUSD4-201ENST00000298317 HSBP1L1C9JCN9 74 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms