RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 MRPL54Q6P161 138 aaKnown RBP16.3■□□□□ 0.2
SMARCC1-201ENST00000254480 RNF133Q8WVZ7 376 aa16.3■□□□□ 0.2
SMARCC1-201ENST00000254480 MGPP08493 103 aa16.3■□□□□ 0.2
SMARCC1-201ENST00000254480 HLA-DRB3P79483 266 aa16.3■□□□□ 0.2
SMARCC1-201ENST00000254480 FAHD2BQ6P2I3 314 aaPredicted RBP16.3■□□□□ 0.2
SMARCC1-201ENST00000254480 FAHD2AQ96GK7 314 aa16.3■□□□□ 0.2
SMARCC1-201ENST00000254480 PTBP3O95758 552 aaKnown RBP16.3■□□□□ 0.2
SMARCC1-201ENST00000254480 OR8I2Q8N0Y5 310 aa16.3■□□□□ 0.2
SMARCC1-201ENST00000254480 SLC25A45Q8N413 288 aa16.3■□□□□ 0.2
SMARCC1-201ENST00000254480 OR4A4PQ8NGN8 299 aa16.3■□□□□ 0.2
SMARCC1-201ENST00000254480 GPHA2Q96T91 129 aa16.3■□□□□ 0.2
SMARCC1-201ENST00000254480 LMX1BO60663 402 aa16.29■□□□□ 0.2
SMARCC1-201ENST00000254480 PSG4Q00888 419 aa16.29■□□□□ 0.2
SMARCC1-201ENST00000254480 RNF122Q9H9V4 155 aa16.29■□□□□ 0.2
SMARCC1-201ENST00000254480 UQCC3Q6UW78 93 aa16.29■□□□□ 0.2
SMARCC1-201ENST00000254480 TMEM251Q8N6I4 163 aa16.29■□□□□ 0.2
SMARCC1-201ENST00000254480 FAM157CP0CG43 387 aa16.29■□□□□ 0.2
SMARCC1-201ENST00000254480 GMPPAQ96IJ6 420 aaPredicted RBP16.29■□□□□ 0.2
SMARCC1-201ENST00000254480 ABHD14BQ96IU4 210 aa16.29■□□□□ 0.2
SMARCC1-201ENST00000254480 PCDHGA9Q9Y5G4 932 aaKnown RBP16.29■□□□□ 0.2
SMARCC1-201ENST00000254480 KIR3DL2P43630 455 aa16.29■□□□□ 0.2
SMARCC1-201ENST00000254480 SPCS3P61009 180 aa16.29■□□□□ 0.2
SMARCC1-201ENST00000254480 RPL31P62899 125 aaKnown RBP16.29■□□□□ 0.2
SMARCC1-201ENST00000254480 LPAR5Q9H1C0 372 aa16.29■□□□□ 0.2
SMARCC1-201ENST00000254480 IL24Q13007 206 aa16.29■□□□□ 0.2
SMARCC1-201ENST00000254480 KLK13Q9UKR3 277 aa16.29■□□□□ 0.2
SMARCC1-201ENST00000254480 NCMAPQ5T1S8 102 aa16.28■□□□□ 0.2
SMARCC1-201ENST00000254480 VWA1Q6PCB0 445 aa16.28■□□□□ 0.2
SMARCC1-201ENST00000254480 MS4A10Q96PG2 267 aa16.28■□□□□ 0.2
SMARCC1-201ENST00000254480 CHODLQ9H9P2 273 aa16.28■□□□□ 0.2
SMARCC1-201ENST00000254480 LPAR3Q9UBY5 353 aa16.28■□□□□ 0.2
SMARCC1-201ENST00000254480 PAGE4O60829 102 aa16.28■□□□□ 0.2
SMARCC1-201ENST00000254480 TTRP02766 147 aa16.28■□□□□ 0.2
SMARCC1-201ENST00000254480 CRHP06850 196 aa16.28■□□□□ 0.2
SMARCC1-201ENST00000254480 IGHV1-45A0A0A0MS14 117 aa16.28■□□□□ 0.2
SMARCC1-201ENST00000254480 KLHDC1Q8N7A1 406 aa16.28■□□□□ 0.2
SMARCC1-201ENST00000254480 OR2W1Q9Y3N9 320 aa16.28■□□□□ 0.2
SMARCC1-201ENST00000254480 C17orf51A8MQB3 221 aa16.28■□□□□ 0.2
SMARCC1-201ENST00000254480 ZNF137PP52743 207 aa16.28■□□□□ 0.2
SMARCC1-201ENST00000254480 OR5R1Q8NH85 324 aa16.28■□□□□ 0.2
SMARCC1-201ENST00000254480 VSTM2AQ8TAG5 236 aa16.28■□□□□ 0.2
SMARCC1-201ENST00000254480 RHBDL1O75783 438 aa16.28■□□□□ 0.2
SMARCC1-201ENST00000254480 IGSF11Q5DX21 431 aa16.28■□□□□ 0.2
SMARCC1-201ENST00000254480 GZMHP20718 246 aa16.27■□□□□ 0.2
SMARCC1-201ENST00000254480 SCAND1P57086 179 aa16.27■□□□□ 0.2
SMARCC1-201ENST00000254480 SLC35E4Q6ICL7 350 aa16.27■□□□□ 0.2
SMARCC1-201ENST00000254480 DGAT2L7PQ6IED9 249 aa16.27■□□□□ 0.2
SMARCC1-201ENST00000254480 ADTRPQ96IZ2 230 aa16.27■□□□□ 0.2
SMARCC1-201ENST00000254480 MS4A5Q9H3V2 200 aa16.27■□□□□ 0.2
SMARCC1-201ENST00000254480 PRSS1P07477 247 aa16.27■□□□□ 0.2
SMARCC1-201ENST00000254480 TMEM50BP56557 158 aa16.27■□□□□ 0.2
SMARCC1-201ENST00000254480 EWSR1Q01844 656 aaKnown RBP eCLIP16.27■□□□□ 0.2
SMARCC1-201ENST00000254480 ST6GAL2Q96JF0 529 aa16.27■□□□□ 0.2
SMARCC1-201ENST00000254480 CHST5Q9GZS9 411 aa16.27■□□□□ 0.2
SMARCC1-201ENST00000254480 WDR54Q9H977 334 aa16.27■□□□□ 0.2
SMARCC1-201ENST00000254480 TECRQ9NZ01 308 aaKnown RBP16.27■□□□□ 0.2
SMARCC1-201ENST00000254480 FAM87AP0C7U9 286 aa16.27■□□□□ 0.2
SMARCC1-201ENST00000254480 RCC1P18754 421 aaPredicted RBP16.27■□□□□ 0.2
SMARCC1-201ENST00000254480 AWAT1Q58HT5 328 aa16.27■□□□□ 0.2
SMARCC1-201ENST00000254480 C8orf82Q6P1X6 216 aaPredicted RBP16.27■□□□□ 0.2
SMARCC1-201ENST00000254480 OR5A2Q8NGI9 324 aa16.27■□□□□ 0.2
SMARCC1-201ENST00000254480 PGLYRP3Q96LB9 341 aa16.27■□□□□ 0.2
SMARCC1-201ENST00000254480 AMELYQ99218 206 aa16.27■□□□□ 0.2
SMARCC1-201ENST00000254480 COL4A5P29400 1685 aa16.27■□□□□ 0.19
SMARCC1-201ENST00000254480 PRDX2P32119 198 aa16.27■□□□□ 0.19
SMARCC1-201ENST00000254480 SCMH1Q96GD3 660 aa16.27■□□□□ 0.19
SMARCC1-201ENST00000254480 AUP1Q9Y679 476 aa16.27■□□□□ 0.19
SMARCC1-201ENST00000254480 TEX50A0A1B0GTY4 177 aa16.27■□□□□ 0.19
SMARCC1-201ENST00000254480 RNF212Q495C1 297 aa16.27■□□□□ 0.19
SMARCC1-201ENST00000254480 C1orf185Q5T7R7 199 aa16.27■□□□□ 0.19
SMARCC1-201ENST00000254480 CBLN2Q8IUK8 224 aa16.27■□□□□ 0.19
SMARCC1-201ENST00000254480 SP7Q8TDD2 431 aaPredicted RBP16.27■□□□□ 0.19
SMARCC1-201ENST00000254480 MIA3Q5JRA6 1907 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 INO80CQ6PI98 192 aaPredicted RBP16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 P2RX4Q99571 388 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 CA10Q9NS85 328 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 SCN2AQ99250 2005 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 P2RY1P47900 373 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 ST6GALNAC2Q9UJ37 374 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 PPIAL4EA0A075B759 164 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 TRAV20A0A0B4J274 112 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 PPIAL4DF5H284 164 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 RPL36A-HNRNPH2H7BZ11 118 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 SYNGR1O43759 233 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 PPIAL4FP0DN26 164 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 LRRC75AQ8NAA5 344 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 OR2V2Q96R30 315 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 HSF4Q9ULV5 492 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 WIPI2Q9Y4P8 454 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 PPIAL4AQ9Y536 164 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 MDC1Q14676 2089 aaKnown RBP16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 SIPA1L3O60292 1781 aaPredicted RBP16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 VDAC1P21796 283 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 CDCP2Q5VXM1 449 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 TMEM171Q8WVE6 324 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 HEXA-AS1Q9H8Q6 139 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 RNF24Q9Y225 148 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 CGB1A6NKQ9 187 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 GZMMP51124 257 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 RPL30P62888 115 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms