RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 WDR74Q6RFH5 385 aaPredicted RBP4.01□□□□□ -1.77
VPS13C-201ENST00000249837 SLC35G3Q8N808 338 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 POM121Q96HA1 1249 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 AP1S3Q96PC3 154 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 OR2H1Q9GZK4 316 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 MNX1P50219 401 aaPredicted RBP4.01□□□□□ -1.77
VPS13C-201ENST00000249837 DLK1P80370 383 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 IGLV3-21P80748 117 aaPredicted RBP4.01□□□□□ -1.77
VPS13C-201ENST00000249837 OR1C1Q15619 314 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 PINX1Q96BK5 328 aaKnown RBP4.01□□□□□ -1.77
VPS13C-201ENST00000249837 ZFHX2Q9C0A1 2572 aaPredicted RBP4.01□□□□□ -1.77
VPS13C-201ENST00000249837 SPRY3O43610 288 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 SYNGR2O43760 224 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 MST1P26927 711 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 DMWDQ09019 674 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 OR8B8Q15620 311 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 TECTBQ96PL2 329 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 RNF222A6NCQ9 220 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 NDUFB7P17568 137 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 RBM11P57052 281 aaKnown RBP4.01□□□□□ -1.77
VPS13C-201ENST00000249837 MZT1Q08AG7 82 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 ASPHD2Q6ICH7 369 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 C16orf82Q7Z2V1 217 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 ATP5SQ99766 215 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 A0A1W2PNV4 684 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 IL2RAP01589 272 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 BTNL3Q6UXE8 466 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 OR2T10Q8NGZ9 312 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 TMEM18Q96B42 140 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.01□□□□□ -1.77
VPS13C-201ENST00000249837 KLRC4-KLRK1H3BQV0 150 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 RAC3P60763 192 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 RND3P61587 244 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 HABP2Q14520 560 aaPredicted RBP4.01□□□□□ -1.77
VPS13C-201ENST00000249837 Q3ZCU0 254 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 RAB40CQ96S21 281 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 OR51I2Q9H344 312 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 TRAPPC1Q9Y5R8 145 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 CACNA1AO00555 2505 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 A0A0A6YYD4 124 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 CRYM-AS1A6NIL9 109 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 MBP02144 154 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 BSXQ3C1V8 233 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 WISP1O95388 367 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 EPHA8P29322 1005 aaPredicted RBP4□□□□□ -1.77
VPS13C-201ENST00000249837 IL11RAQ14626 422 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 TMEM68Q96MH6 324 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 TRIB1Q96RU8 372 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 SLC2A8Q9NY64 477 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 PSG11Q9UQ72 335 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 G3V3Q6 166 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 RPL36A-HNRNPH2H7BZ11 118 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 NPIPB7O75200 414 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 COX5AP20674 150 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 KRTDAPP60985 99 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 MDP1Q86V88 176 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 POC1BQ8TC44 478 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 S1PR3Q99500 378 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 TMEM38BQ9NVV0 291 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 CLN8Q9UBY8 286 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 MYO18BQ8IUG5 2567 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 C5orf63A6NC05 138 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 LYZL6O75951 148 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 PSG2P11465 335 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 SRD5A2P31213 254 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 TCL1AP56279 114 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF718Q3SXZ3 478 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 ACER2Q5QJU3 275 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 OR10P1Q8NGE3 313 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 OR1L1Q8NH94 360 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 MRGPRDQ8TDS7 321 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 GPR61Q9BZJ8 451 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF665Q9H7R5 613 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 POLDIP2Q9Y2S7 368 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 TLN1Q9Y490 2541 aaKnown RBP4□□□□□ -1.77
VPS13C-201ENST00000249837 ATP23Q9Y6H3 246 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 IGKV1D-8A0A087WSZ0 117 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 H3BQ15 152 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 CDS2O95674 445 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 SEC11BP0C7V7 166 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 CEACAM6P40199 344 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 NPBWR2P48146 333 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 MEOX1P50221 254 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF83P51522 516 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 HFEQ30201 348 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 OR10G4Q8NGN3 311 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 OR10G9Q8NGN4 311 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 OR10G7Q8NGN6 311 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 BORCS7Q96B45 105 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 B3GAT1Q9P2W7 334 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 F6UZH7 168 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 ERVS71-1P61550 626 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 PPP1CBP62140 327 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 FAM3AP98173 230 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 PSG4Q00888 419 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 H1FXQ92522 213 aaKnown RBP4□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF319Q9P2F9 582 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 VAX2Q9UIW0 290 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 SEC14L6B5MCN3 397 aa4□□□□□ -1.77
VPS13C-201ENST00000249837 CST2P09228 141 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms