RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 C18orf21Q32NC0 220 aaPredicted RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 CGB2Q6NT52 195 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 PRNTQ86SH4 94 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 MMD2Q8IY49 270 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 TM4SF18Q96CE8 201 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 TMEM38BQ9NVV0 291 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 MTCH2Q9Y6C9 303 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 MEGF6O75095 1541 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 PAPPA2Q9BXP8 1791 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 EDIL3O43854 480 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 ALOX5APP20292 161 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 CAMPP49913 170 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 RBMY1FQ15415 496 aaKnown RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 VAX1Q5SQQ9 334 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 AUNIPQ9H7T9 357 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 SOD3P08294 240 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 SNRPNP63162 240 aaKnown RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 SH2D5Q6ZV89 423 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 ANAPC16Q96DE5 110 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 B4E171 279 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 PTGESO14684 152 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 HYPMO75409 117 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 TSPAN7P41732 249 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 COL9A2Q14055 689 aaPredicted RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 TMEM30BQ3MIR4 351 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 OR8A1Q8NGG7 326 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 MARS2Q96GW9 593 aaKnown RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 FAM122BQ7Z309 247 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 NKAIN4Q8IVV8 208 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 TMEM86BQ8N661 226 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 GLIS1Q8NBF1 620 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 ZBTB44Q8NCP5 570 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 OR10AC1Q8NH08 325 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 GHSRQ92847 366 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 EAF1Q96JC9 268 aaPredicted RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 Q96M85 177 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 CSAG2Q9Y5P2 127 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 MYH14Q7Z406 1995 aaKnown RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 SELENOFO60613 162 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 NAA50Q9GZZ1 169 aaKnown RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 CST9LQ9H4G1 147 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 SCN7AQ01118 1682 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 PCLAFQ15004 111 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 LGALS14Q8TCE9 139 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 IL21Q9HBE4 155 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 OPN4Q9UHM6 478 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 SMAD6O43541 496 aaKnown RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 HIST1H3AP68431 136 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 GGTA1PQ4G0N0 100 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 FAM219BQ5XKK7 198 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 BPIFA4PQ86YQ2 179 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 C20orf196Q8IYI0 205 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 ABHD14BQ96IU4 210 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 SF3B5Q9BWJ5 86 aaKnown RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 C7orf69Q9H7B7 122 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 A0A1B0GTH9 108 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 OR8B12Q8NGG6 310 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 A4GALTQ9NPC4 353 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 METTL1Q9UBP6 276 aaKnown RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 SLIT2O94813 1529 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 TRAV20A0A0B4J274 112 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 CLPSP04118 112 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 MGMTP16455 207 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 TMEM123Q8N131 208 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 SLC25A46Q96AG3 418 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 ALKBH3Q96Q83 286 aaPredicted RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 CRIM1Q9NZV1 1036 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 A0A087WX48 190 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 CXorf65A6NEN9 183 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 GABRB1P18505 474 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 CKS2P33552 79 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 C16orf47Q6ZP98 133 aaPredicted RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 MS4A10Q96PG2 267 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 MRPL20Q9BYC9 149 aaKnown RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 C19orf53Q9UNZ5 99 aaPredicted RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 LEXMQ3ZCV2 418 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 RBM45Q8IUH3 476 aaKnown RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 FBLIM1Q8WUP2 373 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 SPSB2Q99619 263 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 C1orf43Q9BWL3 253 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 RPL31P62899 125 aaKnown RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 RPL24P83731 157 aaKnown RBP3.04□□□□□ -1.92
NEB-201ENST00000172853 RFESDQ8TAC1 157 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 HGDQ93099 445 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 ABHD1Q96SE0 405 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 PSME4Q14997 1843 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 TRPM7Q96QT4 1865 aa3.04□□□□□ -1.92
NEB-201ENST00000172853 UPK1BO75841 260 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 EMX1Q04741 257 aaPredicted RBP3.03□□□□□ -1.92
NEB-201ENST00000172853 PLK5Q496M5 336 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 KIRREL2Q6UWL6 708 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 SPRY1O43609 319 aaPredicted RBP3.03□□□□□ -1.92
NEB-201ENST00000172853 MMP11P24347 488 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 CCR6P51684 374 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 ZNF77Q15935 545 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 ABHD12Q8N2K0 398 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 FAM89BQ8N5H3 189 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 OR10G4Q8NGN3 311 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 OR10G9Q8NGN4 311 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 OR10G7Q8NGN6 311 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms