RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 ZNF837Q96EG3 531 aaPredicted RBP11.89□□□□□ -0.51
SCARB2-227ENST00000640957 SYT3Q9BQG1 590 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 C8orf33Q9H7E9 229 aaPredicted RBP11.89□□□□□ -0.51
SCARB2-227ENST00000640957 FGF21Q9NSA1 209 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 ZNF816-ZNF321PA0A0X1KG74 233 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 C3orf85A0A1B0GTC6 90 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 LRRC3CA6NJW4 275 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 MARCH11A6NNE9 402 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 ALG1L2C9J202 215 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 SUCLG1P53597 346 aaKnown RBP11.89□□□□□ -0.51
SCARB2-227ENST00000640957 ARSJQ5FYB0 599 aaPredicted RBP11.89□□□□□ -0.51
SCARB2-227ENST00000640957 TCF23Q7RTU1 214 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 ODF3L1Q8IXM7 274 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 METTL9Q9H1A3 318 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 UCK1Q9HA47 277 aa11.89□□□□□ -0.51
SCARB2-227ENST00000640957 PI4KAP42356 2102 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 MKRN2OSH3BPM6 223 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 RAB30Q15771 203 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 PRAMEF20Q5VT98 475 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 TBC1D26Q86UD7 250 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 D2HGDHQ8N465 521 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 OR5R1Q8NH85 324 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 NEK7Q8TDX7 302 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 TMEM204Q9BSN7 226 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 PLEK2Q9NYT0 353 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 TRAV34A0A0B4J273 112 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 SERPINE3A8MV23 424 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 GALR1P47211 349 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 TDGF1P3P51864 188 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 PMP22Q01453 160 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 ZNF506Q5JVG8 444 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 ETFRF1Q6IPR1 90 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 OR1L3Q8NH93 324 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 C18orf12Q96KH6 178 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 TBX15Q96SF7 602 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 SLC7A10Q9NS82 523 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 R4GN57 208 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 LTBP2Q14767 1821 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 ZFHX4Q86UP3 3567 aa11.88□□□□□ -0.51
SCARB2-227ENST00000640957 FRG2CA6NGY1 282 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 HSPB1P04792 205 aaKnown RBP11.87□□□□□ -0.51
SCARB2-227ENST00000640957 TLE4Q04727 773 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 IL13RA2Q14627 380 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 TOMM20LQ6UXN7 152 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 Q6ZPA2 131 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 B3GAT1Q9P2W7 334 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 IGKV1-27A0A075B6S5 117 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 A0A087WWC5 75 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 CYB5R3P00387 301 aaPredicted RBP11.87□□□□□ -0.51
SCARB2-227ENST00000640957 CST2P09228 141 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 S100A7P31151 101 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 ZNF726P1Q15940 193 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 DEGS2Q6QHC5 323 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 SLC35E3Q7Z769 313 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 MAML2Q8IZL2 1156 aaPredicted RBP11.87□□□□□ -0.51
SCARB2-227ENST00000640957 GAPTQ8N292 157 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 FAM89BQ8N5H3 189 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 PLEKHF2Q9H8W4 249 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 ERRFI1Q9UJM3 462 aaPredicted RBP11.87□□□□□ -0.51
SCARB2-227ENST00000640957 ANAPC10Q9UM13 185 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 POLR3KQ9Y2Y1 108 aaPredicted RBP11.87□□□□□ -0.51
SCARB2-227ENST00000640957 HEATR1Q9H583 2144 aaKnown RBP11.87□□□□□ -0.51
SCARB2-227ENST00000640957 A0A0G2JRQ6 117 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 IGHV3-64DA0A0J9YX35 117 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 LOC102723971A0A1B0GUV8 181 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 DVL1O14640 695 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 OR8G2PQ6IF36 304 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 DOK3Q7L591 496 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 METTL7AQ9H8H3 244 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 SLC25A22Q9H936 323 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 FKBP11Q9NYL4 201 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 DKKL1Q9UK85 242 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 ST3GAL6Q9Y274 331 aa11.87□□□□□ -0.51
SCARB2-227ENST00000640957 H7BYZ3 331 aa11.86□□□□□ -0.51
SCARB2-227ENST00000640957 OR4D5Q8NGN0 318 aa11.86□□□□□ -0.51
SCARB2-227ENST00000640957 FAM131CQ96AQ9 280 aa11.86□□□□□ -0.51
SCARB2-227ENST00000640957 SDF2L1Q9HCN8 221 aa11.86□□□□□ -0.51
SCARB2-227ENST00000640957 VSTM2BA6NLU5 285 aa11.86□□□□□ -0.51
SCARB2-227ENST00000640957 MPPED1O15442 326 aa11.86□□□□□ -0.51
SCARB2-227ENST00000640957 TSPAN2O60636 221 aa11.86□□□□□ -0.51
SCARB2-227ENST00000640957 HNRNPKP61978 463 aaKnown RBP eCLIP11.86□□□□□ -0.51
SCARB2-227ENST00000640957 IGFBP7Q16270 282 aa11.86□□□□□ -0.51
SCARB2-227ENST00000640957 RAB24Q969Q5 203 aa11.86□□□□□ -0.51
SCARB2-227ENST00000640957 NOL4LQ96MY1 436 aaPredicted RBP11.86□□□□□ -0.51
SCARB2-227ENST00000640957 CCL28Q9NRJ3 127 aa11.86□□□□□ -0.51
SCARB2-227ENST00000640957 IL36RNQ9UBH0 155 aa11.86□□□□□ -0.51
SCARB2-227ENST00000640957 IGKV1D-13A0A0B4J2D9 117 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 GDF9O60383 454 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 CRYAAP02489 173 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 SCTP09683 121 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 IGKV1-13P0DP09 117 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 BCL2P10415 239 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 OR3A1P47881 315 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 ZXDAP98168 799 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 LPAL2Q16609 132 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 ZNF818PQ6ZRF7 136 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 PATZ1Q9HBE1 687 aaKnown RBP11.85□□□□□ -0.51
SCARB2-227ENST00000640957 ZNF286AQ9HBT8 521 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 DLEU1O43261 78 aa11.85□□□□□ -0.51
SCARB2-227ENST00000640957 IGKV3-11P04433 115 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms