RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 MRPL32Q9BYC8 188 aaKnown RBP0.73□□□□□ -2.29
SRP54-214ENST00000630962 ZMAT5Q9UDW3 170 aaKnown RBP0.73□□□□□ -2.29
SRP54-214ENST00000630962 TRPM3Q9HCF6 1732 aaPredicted RBP0.72□□□□□ -2.29
SRP54-214ENST00000630962 TRAV8-7A0A075B6U6 113 aa0.72□□□□□ -2.29
SRP54-214ENST00000630962 RBFOX3A6NFN3 312 aa0.72□□□□□ -2.29
SRP54-214ENST00000630962 SPOPO43791 374 aa0.72□□□□□ -2.29
SRP54-214ENST00000630962 CA2P00918 260 aa0.72□□□□□ -2.29
SRP54-214ENST00000630962 OR4A8P0C604 315 aa0.72□□□□□ -2.29
SRP54-214ENST00000630962 LYNX1P0DP58 116 aa0.72□□□□□ -2.29
SRP54-214ENST00000630962 CPN2P22792 545 aa0.72□□□□□ -2.29
SRP54-214ENST00000630962 EVI2BP34910 448 aa0.72□□□□□ -2.29
SRP54-214ENST00000630962 G6PCP35575 357 aa0.72□□□□□ -2.29
SRP54-214ENST00000630962 CCT6AP40227 531 aaKnown RBP0.72□□□□□ -2.29
SRP54-214ENST00000630962 CLDN8P56748 225 aa0.72□□□□□ -2.29
SRP54-214ENST00000630962 TAL2Q16559 108 aa0.72□□□□□ -2.29
SRP54-214ENST00000630962 ACTBL2Q562R1 376 aa0.72□□□□□ -2.29
SRP54-214ENST00000630962 GAPTQ8N292 157 aa0.72□□□□□ -2.29
SRP54-214ENST00000630962 ARHGAP18Q8N392 663 aa0.72□□□□□ -2.29
SRP54-214ENST00000630962 FAM184AQ8NB25 1140 aa0.72□□□□□ -2.29
SRP54-214ENST00000630962 DRAXINQ8NBI3 349 aaPredicted RBP0.72□□□□□ -2.29
SRP54-214ENST00000630962 FBXO36Q8NEA4 188 aa0.72□□□□□ -2.29
SRP54-214ENST00000630962 RNF133Q8WVZ7 376 aa0.72□□□□□ -2.29
SRP54-214ENST00000630962 FAM131CQ96AQ9 280 aa0.72□□□□□ -2.29
SRP54-214ENST00000630962 OR52B2Q96RD2 323 aa0.72□□□□□ -2.29
SRP54-214ENST00000630962 PUS1Q9Y606 427 aaKnown RBP eCLIP0.72□□□□□ -2.29
SRP54-214ENST00000630962 PXDNLA1KZ92 1463 aa0.72□□□□□ -2.29
SRP54-214ENST00000630962 NEURL4Q96JN8 1562 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 COL18A1P39060 1754 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 A0A1B0GTQ1 180 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 A0A1B0GXF2 115 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 IGSF23A1L1A6 192 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 TMEM250H0YL14 139 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 I3L4J1 428 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 TOR1AO14656 332 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 LPAR6P43657 344 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 GCLMP48507 274 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 HSPA13P48723 471 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 INPP1P49441 399 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 SPAG1Q07617 926 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 DYNC1I2Q13409 638 aaKnown RBP0.71□□□□□ -2.3
SRP54-214ENST00000630962 HTR4Q13639 388 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 PIP5KL1Q5T9C9 394 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 SDIM1Q6ZPB5 146 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 TMCO2Q7Z6W1 182 aaPredicted RBP0.71□□□□□ -2.3
SRP54-214ENST00000630962 MARCH3Q86UD3 253 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 C10orf107Q8IVU9 208 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 LHFPL5Q8TAF8 219 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 PDCD6IPQ8WUM4 868 aaKnown RBP0.71□□□□□ -2.3
SRP54-214ENST00000630962 BIRC8Q96P09 236 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 LINC01587Q99440 93 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 SMDT1Q9H4I9 107 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 RGCCQ9H4X1 137 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 VCX3AQ9NNX9 186 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 ACOT13Q9NPJ3 140 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 POMPQ9Y244 141 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 RGS12O14924 1447 aa0.71□□□□□ -2.3
SRP54-214ENST00000630962 YLPM1P49750 1951 aaKnown RBP0.7□□□□□ -2.3
SRP54-214ENST00000630962 PTPRJQ12913 1337 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 RNASEK-C17orf49H0YIS7 233 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 PRMT5O14744 637 aaPredicted RBP0.7□□□□□ -2.3
SRP54-214ENST00000630962 CD8AP01732 235 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 LIPCP11150 499 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 IL9P15248 144 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 RAB38P57729 211 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 RELAQ04206 551 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 ZBTB6Q15916 424 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 RESP18Q5W5W9 173 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 ELP2Q6IA86 826 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 SSX7Q7RTT5 188 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 OLIG3Q7RTU3 272 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 OR6K2Q8NGY2 324 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 OR6N2Q8NGY6 317 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 C10orf105Q8TEF2 133 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 SUCNR1Q9BXA5 334 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 TSSK6Q9BXA6 273 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 SDHAF2Q9NX18 166 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 RABL2BQ9UNT1 228 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 WASHC3Q9Y3C0 194 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 RHBDD3Q9Y3P4 386 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 V9GYY9 64 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 CCDC88CQ9P219 2028 aa0.7□□□□□ -2.3
SRP54-214ENST00000630962 ADAMTSL3P82987 1691 aa0.69□□□□□ -2.3
SRP54-214ENST00000630962 MED13Q9UHV7 2174 aa0.69□□□□□ -2.3
SRP54-214ENST00000630962 A0A0G2JQZ4 141 aa0.69□□□□□ -2.3
SRP54-214ENST00000630962 ARRDC5A6NEK1 342 aa0.69□□□□□ -2.3
SRP54-214ENST00000630962 UBDO15205 165 aa0.69□□□□□ -2.3
SRP54-214ENST00000630962 CASC3O15234 703 aaKnown RBP0.69□□□□□ -2.3
SRP54-214ENST00000630962 STAG3L3P0CL85 134 aa0.69□□□□□ -2.3
SRP54-214ENST00000630962 PYCR1P32322 319 aa0.69□□□□□ -2.3
SRP54-214ENST00000630962 MAGEA12P43365 314 aa0.69□□□□□ -2.3
SRP54-214ENST00000630962 KRTAP10-4P60372 401 aaPredicted RBP0.69□□□□□ -2.3
SRP54-214ENST00000630962 RHOAP61586 193 aa0.69□□□□□ -2.3
SRP54-214ENST00000630962 TSPAN31Q12999 210 aa0.69□□□□□ -2.3
SRP54-214ENST00000630962 HES1Q14469 280 aa0.69□□□□□ -2.3
SRP54-214ENST00000630962 STK38Q15208 465 aa0.69□□□□□ -2.3
SRP54-214ENST00000630962 LINC00523Q86TU6 105 aa0.69□□□□□ -2.3
SRP54-214ENST00000630962 ATPAF2Q8N5M1 289 aa0.69□□□□□ -2.3
SRP54-214ENST00000630962 ZIC4Q8N9L1 334 aa0.69□□□□□ -2.3
SRP54-214ENST00000630962 ACBD4Q8NC06 268 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms