RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	ZNF726	A6NNF4	738 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891		H3BNH8	94 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	NDUFS8	O00217	210 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	BCKDK	O14874	412 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	SCAMP2	O15127	329 aa	Known RBP	4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	MB	P02144	154 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	IGKV3-11	P04433	115 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	ACSM4	P0C7M7	580 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	SLC35G6	P0C7Q6	338 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	STAG3L2	P0CL84	134 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	CT45A6	P0DMU7	189 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	CT45A5	P0DMU8	189 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	CT45A7	P0DMV0	189 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	C1GALT1C1L	P0DN25	315 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	CFL1	P23528	166 aa	Known RBP	4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	RORC	P51449	518 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	RAB38	P57729	211 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	GNG2	P59768	71 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	PLGLB1	Q02325	96 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	GNA13	Q14344	377 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	CAPRIN1	Q14444	709 aa	Known RBP	4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	KIAA0087	Q14695	138 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	KCNJ8	Q15842	424 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	NNAT	Q16517	81 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	ZNF829	Q3KNS6	432 aa	Predicted RBP	4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	RNF212	Q495C1	297 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	CT45A1	Q5HYN5	189 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	COA6	Q5JTJ3	125 aa	Known RBP	4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	CCNJ	Q5T5M9	372 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	DUPD1	Q68J44	220 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	IDO2	Q6ZQW0	420 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	RNF165	Q6ZSG1	346 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	SYCE1	Q8N0S2	351 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	TMEM156	Q8N614	296 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	OR2G3	Q8NGZ4	309 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	OR8K3	Q8NH51	312 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	CT45A3	Q8NHU0	189 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	NEIL3	Q8TAT5	605 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	FANK1	Q8TC84	345 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	MCOLN3	Q8TDD5	553 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	ARPC1A	Q92747	370 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	P2RX4	Q99571	388 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	FOXC2	Q99958	501 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	TMEM109	Q9BVC6	243 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	OR51B5	Q9H339	312 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	PIGU	Q9H490	435 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	EMC3	Q9P0I2	261 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	KLF13	Q9Y2Y9	288 aa	Predicted RBP	4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	DSCAM	O60469	2012 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	JMJD1C	Q15652	2540 aa		4.03	□□□□□ -1.76
NRXN1-223	ENST00000625891	CSPG4	Q6UVK1	2322 aa		4.03	□□□□□ -1.77
NRXN1-223	ENST00000625891	YLPM1	P49750	1951 aa	Known RBP	4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	TRAV6	A0A075B6T7	132 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	KPNA4	O00629	521 aa	Predicted RBP	4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	TXNDC9	O14530	226 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	CCDC22	O60826	627 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	FKBP6	O75344	327 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	HSBP1	O75506	76 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	CSTA	P01040	98 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	IFNW1	P05000	195 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	IFNA16	P05015	189 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	C8G	P07360	202 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	SERPINA6	P08185	405 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	CSF3	P09919	207 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	ZNF250	P15622	560 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	MGMT	P16455	207 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	CNR1	P21554	472 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	LOX	P28300	417 aa	Predicted RBP	4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	CDK9	P50750	372 aa	Known RBP	4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	S100A12	P80511	92 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	AQP6	Q13520	282 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	TTLL9	Q3SXZ7	439 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	LRRC10	Q5BKY1	277 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	PIGG	Q5H8A4	983 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	ULK3	Q6PHR2	472 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	IZUMO2	Q6UXV1	221 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	ZNF584	Q8IVC4	421 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	NATD1	Q8N6N6	113 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	OR5M1	Q8NGP8	315 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	OR5B3	Q8NH48	314 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	OR52E5	Q8NH55	327 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	NRBF2	Q96F24	287 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	C16orf74	Q96GX8	76 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	EBNA1BP2	Q99848	306 aa	Known RBP	4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	MS4A8	Q9BY19	250 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	UGT2B28	Q9BY64	529 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	MRPL37	Q9BZE1	423 aa	Known RBP	4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	TAS2R13	Q9NYV9	303 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	RSL24D1	Q9UHA3	163 aa	Known RBP	4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	YARS2	Q9Y2Z4	477 aa	Known RBP	4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	ROS1	P08922	2347 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	USF3	Q68DE3	2245 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	FREM1	Q5H8C1	2179 aa		4.02	□□□□□ -1.77
NRXN1-223	ENST00000625891	ARID1A	O14497	2285 aa		4.01	□□□□□ -1.77
NRXN1-223	ENST00000625891	SON	P18583	2426 aa	Known RBP	4.01	□□□□□ -1.77
NRXN1-223	ENST00000625891	TRGV5	A0A0B4J1U4	118 aa		4.01	□□□□□ -1.77
NRXN1-223	ENST00000625891	ZNF816-ZNF321P	A0A0X1KG74	233 aa		4.01	□□□□□ -1.77
NRXN1-223	ENST00000625891	DEFB108A	A8MXU0	73 aa		4.01	□□□□□ -1.77
NRXN1-223	ENST00000625891	EVPLL	A8MZ36	301 aa		4.01	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms