RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 ZBTB37Q5TC79 503 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 SLC16A9Q7RTY1 509 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 PRSS45Q7RTY3 260 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 LRRTM1Q86UE6 522 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 TOMM5Q8N4H5 51 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 OR56B4Q8NH76 319 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 TNFRSF14Q92956 283 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 PHF21AQ96BD5 680 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 ORAI1Q96D31 301 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 R3HDM4Q96D70 268 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 SEH1LQ96EE3 360 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 NPFFR1Q9GZQ6 430 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 RANBP3Q9H6Z4 567 aaPredicted RBP6.38□□□□□ -1.39
CLK1-215ENST00000621181 AUNIPQ9H7T9 357 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 HRASLSQ9HDD0 168 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 AURKAIP1Q9NWT8 199 aaPredicted RBP6.38□□□□□ -1.39
CLK1-215ENST00000621181 MRPL22Q9NWU5 206 aaKnown RBP6.38□□□□□ -1.39
CLK1-215ENST00000621181 KCNG2Q9UJ96 466 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 LINC00862A6NCI5 91 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 NKX6-3A6NJ46 265 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 ACOD1A6NK06 481 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 OR4C45A6NMZ5 311 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 GABARAPH6UMI1 98 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 M0R1W7 72 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 CDIPTO14735 213 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 XRCC2O43543 280 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 SULT1B1O43704 296 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 FBXO24O75426 580 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 MT-ND4P03905 459 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 ANXA3P12429 323 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 NDUFB7P17568 137 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 OR3A3P47888 321 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 MECP2P51608 486 aaKnown RBP6.37□□□□□ -1.39
CLK1-215ENST00000621181 PRKXP51817 358 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 P2RX3P56373 397 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 LRRC75BQ2VPJ9 315 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 WDR82Q6UXN9 313 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 KRT74Q7RTS7 529 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 DCXRQ7Z4W1 244 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 KCTD20Q7Z5Y7 419 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 IZUMO1Q8IYV9 350 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 OR1M1Q8NGA1 313 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 OR4F17Q8NGA8 305 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 OR52I2Q8NH67 350 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 ANGPTL6Q8NI99 470 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 C8orf46Q8TAG6 207 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 C17orf50Q8WW18 174 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 OR4F4Q96R69 305 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 NKX3-1Q99801 234 aaPredicted RBP6.37□□□□□ -1.39
CLK1-215ENST00000621181 PAPOLGQ9BWT3 736 aaKnown RBP6.37□□□□□ -1.39
CLK1-215ENST00000621181 CENPMQ9NSP4 180 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 SLC25A10Q9UBX3 287 aaPredicted RBP6.37□□□□□ -1.39
CLK1-215ENST00000621181 ZNF391Q9UJN7 358 aa6.37□□□□□ -1.39
CLK1-215ENST00000621181 ANKRD20A5PA0PJZ0 165 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 TVP23AA6NH52 213 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 LEUTXA8MZ59 168 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.36□□□□□ -1.39
CLK1-215ENST00000621181 PDCD5O14737 125 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 ANGPTL7O43827 346 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 PEX14O75381 377 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 SLC22A5O76082 557 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 CALCBP10092 127 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 CD37P11049 281 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 ALOX5APP20292 161 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 GNALP38405 381 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 DHODHQ02127 395 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 LGALSLQ3ZCW2 172 aaPredicted RBP6.36□□□□□ -1.39
CLK1-215ENST00000621181 HES5Q5TA89 166 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 STUMQ69YW2 141 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 FDX2Q6P4F2 183 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 WDR86Q86TI4 376 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 C11orf53Q8IXP5 236 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 OR5D13Q8NGL4 314 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 GIMAP1Q8WWP7 306 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 MRPL48Q96GC5 212 aaKnown RBP6.36□□□□□ -1.39
CLK1-215ENST00000621181 FRRS1LQ9P0K9 344 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 PIPOXQ9P0Z9 390 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 MGAT4AQ9UM21 535 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 ING4Q9UNL4 249 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 MRPS7Q9Y2R9 242 aaKnown RBP6.36□□□□□ -1.39
CLK1-215ENST00000621181 V9GY05 133 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 COL7A1Q02388 2944 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 RPS10-NUDT3A0A1W2PQS6 291 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 NAP1L6A6NFF2 107 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 ANXA2P2A6NMY6 339 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 MPC2O95563 127 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 MPIG6BO95866 241 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 SPARCP09486 303 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 ALKBH1Q13686 389 aaKnown RBP6.36□□□□□ -1.39
CLK1-215ENST00000621181 Q499Y3 187 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 RNASE12Q5GAN4 147 aaKnown RBP6.36□□□□□ -1.39
CLK1-215ENST00000621181 ATPAF1Q5TC12 328 aaPredicted RBP6.36□□□□□ -1.39
CLK1-215ENST00000621181 TEX261Q6UWH6 196 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 FTMTQ8N4E7 242 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 ZNF680Q8NEM1 530 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 OR6K6Q8NGW6 343 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 OR2T4Q8NH00 348 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 ZNF671Q8TAW3 534 aa6.36□□□□□ -1.39
CLK1-215ENST00000621181 ZNF431Q8TF32 576 aaPredicted RBP6.36□□□□□ -1.39
CLK1-215ENST00000621181 SPSB4Q96A44 273 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms