RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 MEGF10Q96KG7 1140 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 OR2V2Q96R30 315 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 PHB2Q99623 299 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 GFI1Q99684 422 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 SEC22CQ9BRL7 303 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 AIFM2Q9BRQ8 373 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 BPESC1Q9GZL8 116 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 MFFQ9GZY8 342 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 SHARPINQ9H0F6 387 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 ATG5Q9H1Y0 275 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 AUNIPQ9H7T9 357 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 PCDHB16Q9NRJ7 776 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 ZFP57Q9NU63 452 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 TMEM100Q9NV29 134 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 TREM2Q9NZC2 230 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 V9GYS6 101 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 TANC2Q9HCD6 1990 aa4.41□□□□□ -1.7
SHMT1-211ENST00000618902 IGHV4-61A0A0C4DH41 118 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.4□□□□□ -1.71
SHMT1-211ENST00000618902 LOC107986453A0A1B0GWG9 222 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 KANTRA0A1W2PQU2 76 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 TMEM82A0PJX8 343 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 OR5H14A6NHG9 310 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 DHRS7CA6NNS2 312 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 ZNF850A8MQ14 1090 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 TAAR5O14804 337 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 SMAD7O15105 426 aaKnown RBP4.4□□□□□ -1.71
SHMT1-211ENST00000618902 TPD52L2O43399 206 aaKnown RBP4.4□□□□□ -1.71
SHMT1-211ENST00000618902 FOXH1O75593 365 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 MPC2O95563 127 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 CST4P01036 141 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 RLN1P04808 185 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 IFNA6P05013 189 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 FCER2P06734 321 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 LIPFP07098 398 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 FGF2P09038 288 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 OR4E1P0C645 316 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 PET100P0DJ07 73 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 IGHV4-31P0DP07 118 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 FAHP16930 419 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 EGR1P18146 543 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 NAT1P18440 290 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 RAB3AP20336 220 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 BDKRB2P30411 391 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 IL2RGP31785 369 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 CFHR2P36980 270 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 NUP62P37198 522 aaPredicted RBP4.4□□□□□ -1.71
SHMT1-211ENST00000618902 CD200P41217 278 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 NPY4RP50391 375 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 ZP1P60852 638 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 TNFAIP6P98066 277 aaPredicted RBP4.4□□□□□ -1.71
SHMT1-211ENST00000618902 PAN3Q58A45 887 aaKnown RBP4.4□□□□□ -1.71
SHMT1-211ENST00000618902 TMEM128Q5BJH2 165 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 RNASE10Q5GAN6 216 aaKnown RBP4.4□□□□□ -1.71
SHMT1-211ENST00000618902 TOR2AQ5JU69 321 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 FAM201AQ5SY85 155 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 PRAMEF6Q5VXH4 476 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 TMEM42Q69YG0 159 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 ZNF529Q6P280 563 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 CRIP3Q6Q6R5 217 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 ZNF826PQ6ZT77 177 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 Q6ZTK2 550 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 SLC25A42Q86VD7 318 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 KCNRGQ8N5I3 272 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 INO80EQ8NBZ0 244 aaPredicted RBP4.4□□□□□ -1.71
SHMT1-211ENST00000618902 TMEM185AQ8NFB2 350 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 BEST4Q8NFU0 473 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 OR51D1Q8NGF3 324 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 OR51A4Q8NGJ6 313 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 OR4C16Q8NGL9 310 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 OR13C5Q8NGS8 318 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 SPATA3Q8NHX4 192 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 KCNG3Q8TAE7 436 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 THAP6Q8TBB0 222 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 MITD1Q8WV92 249 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 TMEM158Q8WZ71 300 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 AQP3Q92482 292 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 ADAT3Q96EY9 351 aaPredicted RBP4.4□□□□□ -1.71
SHMT1-211ENST00000618902 JMJD8Q96S16 334 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 SMR3AQ99954 134 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 URM1Q9BTM9 101 aaKnown RBP4.4□□□□□ -1.71
SHMT1-211ENST00000618902 NMES1Q9C002 83 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 ARL6Q9H0F7 186 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 GCM1Q9NP62 436 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.4□□□□□ -1.71
SHMT1-211ENST00000618902 ZC4H2Q9NQZ6 224 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 SDHAF2Q9NX18 166 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 GTF2A1LQ9UNN4 478 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 PPP1R3CQ9UQK1 317 aa4.4□□□□□ -1.71
SHMT1-211ENST00000618902 TRRAPQ9Y4A5 3859 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 IGKV1-27A0A075B6S5 117 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 TRBV6-7A0A0A0MS04 114 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 IGKV1-9A0A0C4DH69 117 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 TMEM272A0A1B0GTI8 110 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 RNF222A6NCQ9 220 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 MPTX1A8MV57 137 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 G3V3Q6 166 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 SMLR1H3BR10 107 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.39□□□□□ -1.71
SHMT1-211ENST00000618902 PPIHO43447 177 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms