RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 E7EQL1 145 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 PSPHP1O15172 72 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 SLC16A4O15374 487 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 GATCO43716 136 aaKnown RBP1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 CYTH3O43739 400 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 CD8AP01732 235 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 THRAP10827 490 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 NQO1P15559 274 aaKnown RBP1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 CAPZBP47756 277 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 ERFP50548 548 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 STC1P52823 247 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 OR12D2P58182 307 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 TAS2R39P59534 338 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 RAB8AP61006 207 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 CXCR4P61073 352 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 PPP1CAP62136 330 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 IL5RAQ01344 420 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 RPL18AQ02543 176 aaKnown RBP1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 CD164Q04900 197 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 TSPAN31Q12999 210 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 KRTAP13-4Q3LI77 160 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 S100A7AQ86SG5 101 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 MRPL52Q86TS9 123 aaKnown RBP1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 C10orf107Q8IVU9 208 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 SLC30A8Q8IWU4 369 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 DAW1Q8N136 415 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 RIBC1Q8N443 379 aaPredicted RBP1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 OR5L1Q8NGL2 311 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 PTH2Q96A98 100 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 OPTNQ96CV9 577 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 ZMYND19Q96E35 227 aaPredicted RBP1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 OR2V2Q96R30 315 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 VAT1Q99536 393 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 TMEM208Q9BTX3 173 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 UGT2B28Q9BY64 529 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 BCL2L14Q9BZR8 327 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 ARL6Q9H0F7 186 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 OR51B5Q9H339 312 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 TMEM100Q9NV29 134 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 BABAM2Q9NXR7 383 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 TAS2R13Q9NYV9 303 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 GUCA1BQ9UMX6 200 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 CFL2Q9Y281 166 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 MTCH2Q9Y6C9 303 aa1.84□□□□□ -2.11
SCAMP1-205ENST00000614488 KIAA0232Q92628 1395 aa1.84□□□□□ -2.12
SCAMP1-205ENST00000614488 ZFYVE9O95405 1425 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 IGHV2OR16-5A0A0B4J2B6 119 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 C15orf65H3BRN8 121 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 ZNF593O00488 134 aaPredicted RBP1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 BIRC5O15392 142 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 SLC31A1O15431 190 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 IGHG2P01859 326 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 HLA-AP01891 365 aaKnown RBP1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 TCRBP04435 133 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 CALB1P05937 261 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 OR5AL1P0C617 328 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 CD99P14209 185 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 HIST1H1CP16403 213 aaKnown RBP1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 RPS12P25398 132 aaKnown RBP1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 GTF2H1P32780 548 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 LSM6P62312 80 aaKnown RBP1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 SLC35A1P78382 337 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 SARNPP82979 210 aaKnown RBP1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 AESQ08117 197 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 PDK2Q15119 407 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 ACSM3Q53FZ2 586 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 THOC7Q6I9Y2 204 aaKnown RBP1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 FAM45BPQ6NSW5 357 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 SPNS3Q6ZMD2 512 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 TCF24Q7RTU0 167 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 Q8NDZ9 215 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 OR4C13Q8NGP0 309 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 ERMNQ8TAM6 284 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 ACTL9Q8TC94 416 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 RXFP2Q8WXD0 754 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 TMEM159Q96B96 161 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 KCTD7Q96MP8 289 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 CDCA4Q9BXL8 241 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 MRPS26Q9BYN8 205 aaKnown RBP1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 COA1Q9GZY4 146 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 ABCG5Q9H222 651 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 ARV1Q9H2C2 271 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 MFSD1Q9H3U5 465 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 ABCB9Q9NP78 766 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 FKBP14Q9NWM8 211 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 ZNF257Q9Y2Q1 563 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 AP3M1Q9Y2T2 418 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 SLC22A7Q9Y694 548 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 USH1CQ9Y6N9 552 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 EVC2Q86UK5 1308 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 MAP3K5Q99683 1374 aa1.83□□□□□ -2.12
SCAMP1-205ENST00000614488 RB1CC1Q8TDY2 1594 aa1.82□□□□□ -2.12
SCAMP1-205ENST00000614488 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.82□□□□□ -2.12
SCAMP1-205ENST00000614488 IGKV1-6A0A0C4DH72 117 aa1.82□□□□□ -2.12
SCAMP1-205ENST00000614488 TINCRA0A1B0GVN0 87 aa1.82□□□□□ -2.12
SCAMP1-205ENST00000614488 C21orf140B9A014 251 aa1.82□□□□□ -2.12
SCAMP1-205ENST00000614488 M0R036 132 aa1.82□□□□□ -2.12
SCAMP1-205ENST00000614488 PGRMC1O00264 195 aaKnown RBP1.82□□□□□ -2.12
SCAMP1-205ENST00000614488 CCRL2O00421 344 aa1.82□□□□□ -2.12
SCAMP1-205ENST00000614488 CXCR6O00574 342 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms