RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 PRSS54Q6PEW0 395 aa22.04■■□□□ 1.12
RUNDC3A-206ENST00000590941 LILRB1Q8NHL6 650 aaPredicted RBP22.04■■□□□ 1.12
RUNDC3A-206ENST00000590941 MSL2Q9HCI7 577 aa22.04■■□□□ 1.12
RUNDC3A-206ENST00000590941 ASF1BQ9NVP2 202 aa22.04■■□□□ 1.12
RUNDC3A-206ENST00000590941 MBD2Q9UBB5 411 aa22.04■■□□□ 1.12
RUNDC3A-206ENST00000590941 FZR1Q9UM11 496 aa22.04■■□□□ 1.12
RUNDC3A-206ENST00000590941 WIPI2Q9Y4P8 454 aa22.04■■□□□ 1.12
RUNDC3A-206ENST00000590941 HOXB5P09067 269 aa22.03■■□□□ 1.12
RUNDC3A-206ENST00000590941 CFHR2P36980 270 aa22.03■■□□□ 1.12
RUNDC3A-206ENST00000590941 PHLDA2Q53GA4 152 aa22.03■■□□□ 1.12
RUNDC3A-206ENST00000590941 TMEM108Q6UXF1 575 aa22.03■■□□□ 1.12
RUNDC3A-206ENST00000590941 CMTM1Q8IZ96 169 aa22.03■■□□□ 1.12
RUNDC3A-206ENST00000590941 NUP37Q8NFH4 326 aa22.03■■□□□ 1.12
RUNDC3A-206ENST00000590941 MBNL3Q9NUK0 354 aaKnown RBP22.03■■□□□ 1.12
RUNDC3A-206ENST00000590941 TRAPPC2LQ9UL33 140 aa22.03■■□□□ 1.12
RUNDC3A-206ENST00000590941 TMEM30CPA0ZSE6 113 aa22.02■■□□□ 1.12
RUNDC3A-206ENST00000590941 BCL2L11O43521 198 aa22.02■■□□□ 1.12
RUNDC3A-206ENST00000590941 OR5AC1P0C628 307 aa22.02■■□□□ 1.12
RUNDC3A-206ENST00000590941 FAM87AP0C7U9 286 aa22.02■■□□□ 1.12
RUNDC3A-206ENST00000590941 PTAFRP25105 342 aa22.02■■□□□ 1.12
RUNDC3A-206ENST00000590941 IGFBP7Q16270 282 aa22.02■■□□□ 1.12
RUNDC3A-206ENST00000590941 DUSP13Q9UII6 198 aa22.02■■□□□ 1.12
RUNDC3A-206ENST00000590941 AKAP13Q12802 2813 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 MPPED1O15442 326 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 CD40P25942 277 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 IL15RAQ13261 267 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 PRAMEF6Q5VXH4 476 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 SLC35E4Q6ICL7 350 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 H1FOOQ8IZA3 346 aaPredicted RBP22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 OR2Z1Q8NG97 314 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 GSX2Q9BZM3 304 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 SLC5A7Q9GZV3 580 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 DNAJB11Q9UBS4 358 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 RAXQ9Y2V3 346 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 OR2W1Q9Y3N9 320 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 APC2O95996 2303 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 hCG_1807616A0A1W2PRN6 198 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 CASP6P55212 293 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 PCSK4Q6UW60 755 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 C20orf204Q6ZNR8 217 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 LDLRAD3Q86YD5 345 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 PLPPR1Q8TBJ4 325 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 SCARB1Q8WTV0 552 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 TMEM171Q8WVE6 324 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 DCUN1D4Q92564 292 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 OR10C1Q96KK4 312 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 VKORC1Q9BQB6 163 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 PRR13Q9NZ81 148 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 KCNIP1Q9NZI2 227 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 TMED3Q9Y3Q3 217 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 SVILO95425 2214 aa22.01■■□□□ 1.11
RUNDC3A-206ENST00000590941 IGKV1-6A0A0C4DH72 117 aa22■■□□□ 1.11
RUNDC3A-206ENST00000590941 C3orf85A0A1B0GTC6 90 aa22■■□□□ 1.11
RUNDC3A-206ENST00000590941 DUXBA0A1W2PPF3 345 aa22■■□□□ 1.11
RUNDC3A-206ENST00000590941 LINC00862A6NCI5 91 aa22■■□□□ 1.11
RUNDC3A-206ENST00000590941 RNF222A6NCQ9 220 aa22■■□□□ 1.11
RUNDC3A-206ENST00000590941 GNRHRP30968 328 aa22■■□□□ 1.11
RUNDC3A-206ENST00000590941 AP2S1P53680 142 aaPredicted RBP22■■□□□ 1.11
RUNDC3A-206ENST00000590941 SMCO1Q147U7 214 aa22■■□□□ 1.11
RUNDC3A-206ENST00000590941 HMGN3Q15651 99 aa22■■□□□ 1.11
RUNDC3A-206ENST00000590941 IAH1Q2TAA2 248 aaPredicted RBP22■■□□□ 1.11
RUNDC3A-206ENST00000590941 GGNBP1Q5YKI7 109 aa22■■□□□ 1.11
RUNDC3A-206ENST00000590941 ALKBH2Q6NS38 261 aa22■■□□□ 1.11
RUNDC3A-206ENST00000590941 SECTM1Q8WVN6 248 aa22■■□□□ 1.11
RUNDC3A-206ENST00000590941 RND1Q92730 232 aa22■■□□□ 1.11
RUNDC3A-206ENST00000590941 OR14J1Q9UGF5 321 aa22■■□□□ 1.11
RUNDC3A-206ENST00000590941 ZNF205O95201 554 aa21.99■■□□□ 1.11
RUNDC3A-206ENST00000590941 CCKARP32238 428 aa21.99■■□□□ 1.11
RUNDC3A-206ENST00000590941 ZNF826PQ6ZT77 177 aa21.99■■□□□ 1.11
RUNDC3A-206ENST00000590941 C18orf12Q96KH6 178 aa21.99■■□□□ 1.11
RUNDC3A-206ENST00000590941 KIF25Q9UIL4 384 aa21.99■■□□□ 1.11
RUNDC3A-206ENST00000590941 PHF1O43189 567 aaPredicted RBP21.98■■□□□ 1.11
RUNDC3A-206ENST00000590941 CFDP00746 253 aaPredicted RBP21.98■■□□□ 1.11
RUNDC3A-206ENST00000590941 RLN2P04090 185 aa21.98■■□□□ 1.11
RUNDC3A-206ENST00000590941 WNT2P09544 360 aa21.98■■□□□ 1.11
RUNDC3A-206ENST00000590941 RCC1P18754 421 aaPredicted RBP21.98■■□□□ 1.11
RUNDC3A-206ENST00000590941 PAX5Q02548 391 aa21.98■■□□□ 1.11
RUNDC3A-206ENST00000590941 RELL2Q8NC24 303 aaPredicted RBP21.98■■□□□ 1.11
RUNDC3A-206ENST00000590941 LRRC29Q8WV35 223 aa21.98■■□□□ 1.11
RUNDC3A-206ENST00000590941 MSI2Q96DH6 328 aaKnown RBP21.98■■□□□ 1.11
RUNDC3A-206ENST00000590941 SRRM5B3KS81 715 aa21.98■■□□□ 1.11
RUNDC3A-206ENST00000590941 ATP6V1G2-DDX39BF2Z307 99 aa21.98■■□□□ 1.11
RUNDC3A-206ENST00000590941 KLRB1Q12918 225 aa21.98■■□□□ 1.11
RUNDC3A-206ENST00000590941 TRAT1Q6PIZ9 186 aa21.98■■□□□ 1.11
RUNDC3A-206ENST00000590941 GLYATL2Q8WU03 294 aa21.98■■□□□ 1.11
RUNDC3A-206ENST00000590941 ARPC5LQ9BPX5 153 aa21.98■■□□□ 1.11
RUNDC3A-206ENST00000590941 TMEM222Q9H0R3 208 aa21.98■■□□□ 1.11
RUNDC3A-206ENST00000590941 NGBQ9NPG2 151 aa21.98■■□□□ 1.11
RUNDC3A-206ENST00000590941 UFSP2Q9NUQ7 469 aa21.98■■□□□ 1.11
RUNDC3A-206ENST00000590941 ATXN7L3Q14CW9 347 aaPredicted RBP21.97■■□□□ 1.11
RUNDC3A-206ENST00000590941 C6orf183Q5T699 404 aa21.97■■□□□ 1.11
RUNDC3A-206ENST00000590941 OR11L1Q8NGX0 322 aa21.97■■□□□ 1.11
RUNDC3A-206ENST00000590941 PPP1R35Q8TAP8 253 aa21.97■■□□□ 1.11
RUNDC3A-206ENST00000590941 PHYHIPLQ96FC7 376 aa21.97■■□□□ 1.11
RUNDC3A-206ENST00000590941 RNF126Q9BV68 326 aa21.97■■□□□ 1.11
RUNDC3A-206ENST00000590941 GSKIPQ9P0R6 139 aa21.97■■□□□ 1.11
RUNDC3A-206ENST00000590941 CELSR3Q9NYQ7 3312 aa21.96■■□□□ 1.11
RUNDC3A-206ENST00000590941 OOEPA6NGQ2 149 aa21.96■■□□□ 1.11
RUNDC3A-206ENST00000590941 ZSCAN5BA6NJL1 495 aa21.96■■□□□ 1.11
RUNDC3A-206ENST00000590941 MPTX1A8MV57 137 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms