RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 SMIM19Q96E16 107 aa13.7□□□□□ -0.22
RETREG3-210ENST00000590541 TMEM80Q96HE8 168 aa13.7□□□□□ -0.22
RETREG3-210ENST00000590541 GPER1Q99527 375 aa13.7□□□□□ -0.22
RETREG3-210ENST00000590541 NCOR1P1Q9H4R4 102 aa13.7□□□□□ -0.22
RETREG3-210ENST00000590541 DPM3Q9P2X0 92 aa13.7□□□□□ -0.22
RETREG3-210ENST00000590541 LYSTQ99698 3801 aa13.7□□□□□ -0.22
RETREG3-210ENST00000590541 CALCBP10092 127 aa13.69□□□□□ -0.22
RETREG3-210ENST00000590541 BRS3P32247 399 aa13.69□□□□□ -0.22
RETREG3-210ENST00000590541 ADARB1P78563 741 aaKnown RBP13.69□□□□□ -0.22
RETREG3-210ENST00000590541 DOC2BQ14184 412 aa13.69□□□□□ -0.22
RETREG3-210ENST00000590541 IL13RA2Q14627 380 aa13.69□□□□□ -0.22
RETREG3-210ENST00000590541 RCN1Q15293 331 aa13.69□□□□□ -0.22
RETREG3-210ENST00000590541 Q6P435 159 aa13.69□□□□□ -0.22
RETREG3-210ENST00000590541 Q8NFD4 153 aa13.69□□□□□ -0.22
RETREG3-210ENST00000590541 OR51T1Q8NGJ9 327 aa13.69□□□□□ -0.22
RETREG3-210ENST00000590541 ZNF596Q8TC21 504 aa13.69□□□□□ -0.22
RETREG3-210ENST00000590541 TMEM106AQ96A25 262 aa13.69□□□□□ -0.22
RETREG3-210ENST00000590541 CREB3L1Q96BA8 519 aa13.69□□□□□ -0.22
RETREG3-210ENST00000590541 TMEM138Q9NPI0 162 aa13.69□□□□□ -0.22
RETREG3-210ENST00000590541 OR6C3Q9NZP0 311 aa13.69□□□□□ -0.22
RETREG3-210ENST00000590541 ODAMA1E959 279 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 EFCAB10A6NFE3 127 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 ZNF729A6NN14 1252 aaPredicted RBP13.68□□□□□ -0.22
RETREG3-210ENST00000590541 SLC33A1O00400 549 aaPredicted RBP13.68□□□□□ -0.22
RETREG3-210ENST00000590541 SNRNP70P08621 437 aaKnown RBP13.68□□□□□ -0.22
RETREG3-210ENST00000590541 SLC6A1P30531 599 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 SOX2P48431 317 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 KCNJ3P48549 501 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 LUMP51884 338 aaPredicted RBP13.68□□□□□ -0.22
RETREG3-210ENST00000590541 ARHGDIBP52566 201 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 TAS2R43P59537 309 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 PPP3R1P63098 170 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 SCN1BQ07699 218 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 AESQ08117 197 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 KIAA2026Q5HYC2 2103 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 KRBOX4Q5JUW0 171 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 OR2G6Q5TZ20 316 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 BAIAP2L2Q6UXY1 529 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 ASCL4Q6XD76 172 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 C8orf59Q8N0T1 100 aaPredicted RBP13.68□□□□□ -0.22
RETREG3-210ENST00000590541 ZNF565Q8N9K5 539 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 KLHL30-AS1Q8NEE0 82 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 OR4D6Q8NGJ1 314 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 DUX3Q96PT4 197 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 VCXQ9H320 206 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 PCDHB16Q9NRJ7 776 aa13.68□□□□□ -0.22
RETREG3-210ENST00000590541 PAK1IP1Q9NWT1 392 aaPredicted RBP13.68□□□□□ -0.22
RETREG3-210ENST00000590541 CNOT2Q9NZN8 540 aaKnown RBP13.68□□□□□ -0.22
RETREG3-210ENST00000590541 NUDT19A8MXV4 375 aa13.67□□□□□ -0.22
RETREG3-210ENST00000590541 GABRPO00591 440 aa13.67□□□□□ -0.22
RETREG3-210ENST00000590541 CASQ2O14958 399 aaPredicted RBP13.67□□□□□ -0.22
RETREG3-210ENST00000590541 CHATP28329 748 aa13.67□□□□□ -0.22
RETREG3-210ENST00000590541 CD34P28906 385 aa13.67□□□□□ -0.22
RETREG3-210ENST00000590541 CAPGP40121 348 aa13.67□□□□□ -0.22
RETREG3-210ENST00000590541 OR3A4PP47883 348 aa13.67□□□□□ -0.22
RETREG3-210ENST00000590541 GLIPR1P48060 266 aa13.67□□□□□ -0.22
RETREG3-210ENST00000590541 BDH1Q02338 343 aa13.67□□□□□ -0.22
RETREG3-210ENST00000590541 PAX5Q02548 391 aa13.67□□□□□ -0.22
RETREG3-210ENST00000590541 RSU1Q15404 277 aa13.67□□□□□ -0.22
RETREG3-210ENST00000590541 XAF1Q6GPH4 301 aa13.67□□□□□ -0.22
RETREG3-210ENST00000590541 SATL1Q86VE3 508 aa13.67□□□□□ -0.22
RETREG3-210ENST00000590541 ABHD12Q8N2K0 398 aa13.67□□□□□ -0.22
RETREG3-210ENST00000590541 TNFAIP8L1Q8WVP5 186 aa13.67□□□□□ -0.22
RETREG3-210ENST00000590541 RGP1Q92546 391 aaPredicted RBP13.67□□□□□ -0.22
RETREG3-210ENST00000590541 NOL4LQ96MY1 436 aaPredicted RBP13.67□□□□□ -0.22
RETREG3-210ENST00000590541 BARHL1Q9BZE3 327 aa13.67□□□□□ -0.22
RETREG3-210ENST00000590541 ZFP57Q9NU63 452 aa13.67□□□□□ -0.22
RETREG3-210ENST00000590541 IL36GQ9NZH8 169 aa13.67□□□□□ -0.22
RETREG3-210ENST00000590541 H0YJX3 145 aa13.66□□□□□ -0.22
RETREG3-210ENST00000590541 M0QZK8 103 aa13.66□□□□□ -0.22
RETREG3-210ENST00000590541 ZNF780AO75290 641 aaPredicted RBP13.66□□□□□ -0.22
RETREG3-210ENST00000590541 GPX5O75715 221 aa13.66□□□□□ -0.22
RETREG3-210ENST00000590541 CDK2P24941 298 aa13.66□□□□□ -0.22
RETREG3-210ENST00000590541 CEACAM3P40198 252 aa13.66□□□□□ -0.22
RETREG3-210ENST00000590541 PTGFRP43088 359 aa13.66□□□□□ -0.22
RETREG3-210ENST00000590541 ST3GAL4Q11206 333 aa13.66□□□□□ -0.22
RETREG3-210ENST00000590541 YIF1BQ5BJH7 314 aa13.66□□□□□ -0.22
RETREG3-210ENST00000590541 NHLRC3Q5JS37 347 aa13.66□□□□□ -0.22
RETREG3-210ENST00000590541 OGFRL1Q5TC84 451 aaPredicted RBP13.66□□□□□ -0.22
RETREG3-210ENST00000590541 DMKNQ6E0U4 476 aaPredicted RBP13.66□□□□□ -0.22
RETREG3-210ENST00000590541 OR51A2Q8NGJ7 313 aa13.66□□□□□ -0.22
RETREG3-210ENST00000590541 THRSPQ92748 146 aa13.66□□□□□ -0.22
RETREG3-210ENST00000590541 GGHQ92820 318 aa13.66□□□□□ -0.22
RETREG3-210ENST00000590541 RAX2Q96IS3 184 aa13.66□□□□□ -0.22
RETREG3-210ENST00000590541 S100A13Q99584 98 aa13.66□□□□□ -0.22
RETREG3-210ENST00000590541 METTL9Q9H1A3 318 aa13.66□□□□□ -0.22
RETREG3-210ENST00000590541 PLCXD1Q9NUJ7 323 aa13.66□□□□□ -0.22
RETREG3-210ENST00000590541 TAS2R4Q9NYW5 299 aa13.66□□□□□ -0.22
RETREG3-210ENST00000590541 CKLFQ9UBR5 152 aa13.66□□□□□ -0.22
RETREG3-210ENST00000590541 A0A087X0M5 115 aa13.65□□□□□ -0.22
RETREG3-210ENST00000590541 A0A1B0GX30 115 aa13.65□□□□□ -0.22
RETREG3-210ENST00000590541 IGLV1-47P01700 117 aa13.65□□□□□ -0.22
RETREG3-210ENST00000590541 BDKRB2P30411 391 aa13.65□□□□□ -0.22
RETREG3-210ENST00000590541 ZNF93P35789 620 aaPredicted RBP13.65□□□□□ -0.22
RETREG3-210ENST00000590541 PRRX1P54821 245 aa13.65□□□□□ -0.22
RETREG3-210ENST00000590541 GP2P55259 537 aaKnown RBP13.65□□□□□ -0.22
RETREG3-210ENST00000590541 Q499Y3 187 aa13.65□□□□□ -0.22
RETREG3-210ENST00000590541 PAN3Q58A45 887 aaKnown RBP13.65□□□□□ -0.22
RETREG3-210ENST00000590541 LINC00596Q86U02 117 aa13.65□□□□□ -0.22
RETREG3-210ENST00000590541 ZNF485Q8NCK3 441 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms