RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 FBLN7Q53RD9 439 aa12.68□□□□□ -0.38
CRLF3-203ENST00000578692 DDI2Q5TDH0 399 aa12.68□□□□□ -0.38
CRLF3-203ENST00000578692 OSR2Q8N2R0 312 aa12.68□□□□□ -0.38
CRLF3-203ENST00000578692 SUMF2Q8NBJ7 301 aa12.68□□□□□ -0.38
CRLF3-203ENST00000578692 OR52N1Q8NH53 320 aa12.68□□□□□ -0.38
CRLF3-203ENST00000578692 RFESDQ8TAC1 157 aa12.68□□□□□ -0.38
CRLF3-203ENST00000578692 MRGPRDQ8TDS7 321 aa12.68□□□□□ -0.38
CRLF3-203ENST00000578692 GHSRQ92847 366 aa12.68□□□□□ -0.38
CRLF3-203ENST00000578692 RPEQ96AT9 228 aa12.68□□□□□ -0.38
CRLF3-203ENST00000578692 ORAI1Q96D31 301 aa12.68□□□□□ -0.38
CRLF3-203ENST00000578692 SMIM19Q96E16 107 aa12.68□□□□□ -0.38
CRLF3-203ENST00000578692 TMEM80Q96HE8 168 aa12.68□□□□□ -0.38
CRLF3-203ENST00000578692 DPCDQ9BVM2 203 aaPredicted RBP12.68□□□□□ -0.38
CRLF3-203ENST00000578692 LINC00574Q9H8X3 128 aa12.68□□□□□ -0.38
CRLF3-203ENST00000578692 IL36GQ9NZH8 169 aa12.68□□□□□ -0.38
CRLF3-203ENST00000578692 CLEC2DQ9UHP7 191 aa12.68□□□□□ -0.38
CRLF3-203ENST00000578692 PSG11Q9UQ72 335 aa12.68□□□□□ -0.38
CRLF3-203ENST00000578692 AMMECR1Q9Y4X0 333 aaPredicted RBP12.68□□□□□ -0.38
CRLF3-203ENST00000578692 NOTCH1P46531 2555 aa12.67□□□□□ -0.38
CRLF3-203ENST00000578692 OR7C1O76099 320 aaPredicted RBP12.67□□□□□ -0.38
CRLF3-203ENST00000578692 LALBAP00709 142 aa12.67□□□□□ -0.38
CRLF3-203ENST00000578692 FAM106CPP0CH98 169 aa12.67□□□□□ -0.38
CRLF3-203ENST00000578692 LTC4SQ16873 150 aa12.67□□□□□ -0.38
CRLF3-203ENST00000578692 NHLRC3Q5JS37 347 aa12.67□□□□□ -0.38
CRLF3-203ENST00000578692 KPRPQ5T749 579 aaPredicted RBP12.67□□□□□ -0.38
CRLF3-203ENST00000578692 THNSL2Q86YJ6 484 aa12.67□□□□□ -0.38
CRLF3-203ENST00000578692 DHRSXQ8N5I4 330 aa12.67□□□□□ -0.38
CRLF3-203ENST00000578692 SETD9Q8NE22 299 aa12.67□□□□□ -0.38
CRLF3-203ENST00000578692 OR10A7Q8NGE5 316 aa12.67□□□□□ -0.38
CRLF3-203ENST00000578692 OR13C5Q8NGS8 318 aa12.67□□□□□ -0.38
CRLF3-203ENST00000578692 LEAP2Q969E1 77 aa12.67□□□□□ -0.38
CRLF3-203ENST00000578692 TOMM40LQ969M1 308 aa12.67□□□□□ -0.38
CRLF3-203ENST00000578692 IFT22Q9H7X7 185 aa12.67□□□□□ -0.38
CRLF3-203ENST00000578692 C8orf4Q9NR00 106 aa12.67□□□□□ -0.38
CRLF3-203ENST00000578692 PCDHB16Q9NRJ7 776 aa12.67□□□□□ -0.38
CRLF3-203ENST00000578692 PAK1IP1Q9NWT1 392 aaPredicted RBP12.67□□□□□ -0.38
CRLF3-203ENST00000578692 ZNF581Q9P0T4 197 aa12.67□□□□□ -0.38
CRLF3-203ENST00000578692 TRAV39A0A0B4J263 110 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 TRBV5-5A0A0J9YX44 114 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 FAM90A18PA6NE21 464 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 FAM90A16PA6NEW6 464 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 FAM90A20PA6NIJ5 464 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 FAM90A9PA6NNJ1 464 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 FAM90A12PA8MX19 464 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 FAM90A5PA8MXJ8 464 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 GEMIN2O14893 280 aaKnown RBP12.66□□□□□ -0.38
CRLF3-203ENST00000578692 GPX5O75715 221 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 AMY1AP04745 511 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 AMY2AP04746 511 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 FAM90A15PP0C7V4 464 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 FAM90A13PP0C7W8 464 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 FAM90A14PP0C7W9 464 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 FAM90A24PP0C7X0 464 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 IGFBP3P17936 291 aaPredicted RBP12.66□□□□□ -0.38
CRLF3-203ENST00000578692 GZMHP20718 246 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 SERPINA2P20848 420 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 RBM11P57052 281 aaKnown RBP12.66□□□□□ -0.38
CRLF3-203ENST00000578692 ADARB1P78563 741 aaKnown RBP12.66□□□□□ -0.38
CRLF3-203ENST00000578692 RIPK1Q13546 671 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 OXLD1Q5BKU9 147 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 DMKNQ6E0U4 476 aaPredicted RBP12.66□□□□□ -0.38
CRLF3-203ENST00000578692 SLC16A12Q6ZSM3 486 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 GGHQ92820 318 aa12.66□□□□□ -0.38
CRLF3-203ENST00000578692 ZNF184Q99676 751 aaPredicted RBP12.66□□□□□ -0.38
CRLF3-203ENST00000578692 A0A1W2PRX2 142 aa12.65□□□□□ -0.38
CRLF3-203ENST00000578692 SH2D7A6NKC9 451 aaPredicted RBP12.65□□□□□ -0.38
CRLF3-203ENST00000578692 M0QZK8 103 aa12.65□□□□□ -0.38
CRLF3-203ENST00000578692 ZNF780AO75290 641 aaPredicted RBP12.65□□□□□ -0.38
CRLF3-203ENST00000578692 SSTR5P35346 364 aa12.65□□□□□ -0.38
CRLF3-203ENST00000578692 MADCAM1Q13477 382 aa12.65□□□□□ -0.38
CRLF3-203ENST00000578692 Q499Y3 187 aa12.65□□□□□ -0.38
CRLF3-203ENST00000578692 YIF1BQ5BJH7 314 aa12.65□□□□□ -0.38
CRLF3-203ENST00000578692 C9orf152Q5JTZ5 239 aa12.65□□□□□ -0.38
CRLF3-203ENST00000578692 ATAD3CQ5T2N8 411 aa12.65□□□□□ -0.38
CRLF3-203ENST00000578692 LINC00596Q86U02 117 aa12.65□□□□□ -0.38
CRLF3-203ENST00000578692 PACRGLQ8N7B6 248 aa12.65□□□□□ -0.38
CRLF3-203ENST00000578692 PRKDCP78527 4128 aaKnown RBP12.64□□□□□ -0.39
CRLF3-203ENST00000578692 TCRBV4S1A1TA0A5B7 111 aa12.64□□□□□ -0.39
CRLF3-203ENST00000578692 PRB2P02812 416 aaPredicted RBP12.64□□□□□ -0.39
CRLF3-203ENST00000578692 SNRNP70P08621 437 aaKnown RBP12.64□□□□□ -0.39
CRLF3-203ENST00000578692 GTF2F2P13984 249 aa12.64□□□□□ -0.39
CRLF3-203ENST00000578692 GNG10P50151 68 aa12.64□□□□□ -0.39
CRLF3-203ENST00000578692 RPS11P62280 158 aaKnown RBP eCLIP12.64□□□□□ -0.39
CRLF3-203ENST00000578692 ST3GAL4Q11206 333 aa12.64□□□□□ -0.39
CRLF3-203ENST00000578692 DIAPH2-AS1Q14236 149 aa12.64□□□□□ -0.39
CRLF3-203ENST00000578692 GPR176Q14439 515 aa12.64□□□□□ -0.39
CRLF3-203ENST00000578692 MPV17LQ2QL34 196 aa12.64□□□□□ -0.39
CRLF3-203ENST00000578692 SLC22A6Q4U2R8 563 aa12.64□□□□□ -0.39
CRLF3-203ENST00000578692 TCTEX1D4Q5JR98 221 aa12.64□□□□□ -0.39
CRLF3-203ENST00000578692 ZFP41Q8N8Y5 198 aa12.64□□□□□ -0.39
CRLF3-203ENST00000578692 ZNF485Q8NCK3 441 aa12.64□□□□□ -0.39
CRLF3-203ENST00000578692 OR56B4Q8NH76 319 aa12.64□□□□□ -0.39
CRLF3-203ENST00000578692 CKLFQ9UBR5 152 aa12.64□□□□□ -0.39
CRLF3-203ENST00000578692 TSSC4Q9Y5U2 329 aaPredicted RBP12.64□□□□□ -0.39
CRLF3-203ENST00000578692 HSPE1-MOB4S4R3N1 261 aa12.64□□□□□ -0.39
CRLF3-203ENST00000578692 TGP01266 2768 aa12.63□□□□□ -0.39
CRLF3-203ENST00000578692 A0A1W2PP11 408 aa12.63□□□□□ -0.39
CRLF3-203ENST00000578692 TMEM30CPA0ZSE6 113 aa12.63□□□□□ -0.39
CRLF3-203ENST00000578692 RAB7AP51149 207 aa12.63□□□□□ -0.39
CRLF3-203ENST00000578692 HES1Q14469 280 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms