RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 GFI1BQ5VTD9 330 aa14.99□□□□□ -0.01
SCARF1-205ENST00000571272 THNSL2Q86YJ6 484 aa14.99□□□□□ -0.01
SCARF1-205ENST00000571272 CPEB3Q8NE35 698 aaKnown RBP14.99□□□□□ -0.01
SCARF1-205ENST00000571272 CLDND2Q8NHS1 167 aa14.99□□□□□ -0.01
SCARF1-205ENST00000571272 PLPPR1Q8TBJ4 325 aa14.99□□□□□ -0.01
SCARF1-205ENST00000571272 Q9N2K0 584 aa14.99□□□□□ -0.01
SCARF1-205ENST00000571272 MRPS17Q9Y2R5 130 aaKnown RBP14.99□□□□□ -0.01
SCARF1-205ENST00000571272 GJE1A6NN92 205 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 C3orf80F5H4A9 247 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 TRAPPC6AO75865 159 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 TRGC2P03986 189 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 RFPL3SP0C7P2 107 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 VDAC1P21796 283 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 GPM6AP51674 278 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 KRTAP27-1Q3LI81 207 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 OR56B2PQ8NGI1 322 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 CALHM2Q9HA72 323 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 GAR1Q9NY12 217 aaKnown RBP14.98□□□□□ -0.01
SCARF1-205ENST00000571272 HIST1H2BKO60814 126 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 KLF7O75840 302 aaPredicted RBP14.98□□□□□ -0.01
SCARF1-205ENST00000571272 HIST1H2BJP06899 126 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 KLK3P07288 261 aaPredicted RBP14.98□□□□□ -0.01
SCARF1-205ENST00000571272 HIST1H2BOP23527 126 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 HIST1H2BBP33778 126 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 HIST1H2BDP58876 126 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 HIST1H2BCP62807 126 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 HIST2H2BEQ16778 126 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 ZNF506Q5JVG8 444 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.98□□□□□ -0.01
SCARF1-205ENST00000571272 SLC25A24Q6NUK1 477 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 GGNQ86UU5 652 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 OR8G5Q8NG78 346 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 ABHD3Q8WU67 409 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 HIST1H2BHQ93079 126 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 HIST1H2BNQ99877 126 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 HIST1H2BMQ99879 126 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 SH2D2AQ9NP31 389 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 GNG13Q9P2W3 67 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 ZNF391Q9UJN7 358 aa14.98□□□□□ -0.01
SCARF1-205ENST00000571272 HLA-HP01893 362 aa14.97□□□□□ -0.01
SCARF1-205ENST00000571272 HSPB1P04792 205 aaKnown RBP14.97□□□□□ -0.01
SCARF1-205ENST00000571272 PAX9P55771 341 aa14.97□□□□□ -0.01
SCARF1-205ENST00000571272 OR10D4PQ8NGN7 298 aa14.97□□□□□ -0.01
SCARF1-205ENST00000571272 OR10D3Q8NH80 312 aa14.97□□□□□ -0.01
SCARF1-205ENST00000571272 PFDN5Q99471 154 aa14.97□□□□□ -0.01
SCARF1-205ENST00000571272 DUSP23Q9BVJ7 150 aa14.97□□□□□ -0.01
SCARF1-205ENST00000571272 WDR54Q9H977 334 aa14.97□□□□□ -0.01
SCARF1-205ENST00000571272 GPR35Q9HC97 309 aa14.97□□□□□ -0.01
SCARF1-205ENST00000571272 IGKV1-6A0A0C4DH72 117 aa14.97□□□□□ -0.01
SCARF1-205ENST00000571272 A0A0G2JRQ6 117 aa14.97□□□□□ -0.01
SCARF1-205ENST00000571272 SLC34A2O95436 690 aa14.97□□□□□ -0.01
SCARF1-205ENST00000571272 CCL4P13236 92 aa14.97□□□□□ -0.01
SCARF1-205ENST00000571272 UCP1P25874 307 aa14.97□□□□□ -0.01
SCARF1-205ENST00000571272 TLE4Q04727 773 aa14.97□□□□□ -0.01
SCARF1-205ENST00000571272 TMEM267Q0VDI3 215 aaPredicted RBP14.97□□□□□ -0.01
SCARF1-205ENST00000571272 WIPI1Q5MNZ9 446 aaPredicted RBP14.97□□□□□ -0.01
SCARF1-205ENST00000571272 ZNF845Q96IR2 970 aaPredicted RBP14.97□□□□□ -0.01
SCARF1-205ENST00000571272 DOCK7Q96N67 2140 aa14.97□□□□□ -0.01
SCARF1-205ENST00000571272 FGF23Q9GZV9 251 aaPredicted RBP14.97□□□□□ -0.01
SCARF1-205ENST00000571272 TAAR3PQ9P1P4 343 aa14.97□□□□□ -0.01
SCARF1-205ENST00000571272 DMRT1Q9Y5R6 373 aa14.97□□□□□ -0.01
SCARF1-205ENST00000571272 NCKAP5O14513 1909 aa14.97□□□□□ -0.01
SCARF1-205ENST00000571272 A0A087WWC5 75 aa14.96□□□□□ -0.01
SCARF1-205ENST00000571272 NDUFS6O75380 124 aaKnown RBP14.96□□□□□ -0.01
SCARF1-205ENST00000571272 F10P00742 488 aa14.96□□□□□ -0.01
SCARF1-205ENST00000571272 RAB11AP62491 216 aa14.96□□□□□ -0.01
SCARF1-205ENST00000571272 SP5Q6BEB4 398 aaPredicted RBP14.96□□□□□ -0.01
SCARF1-205ENST00000571272 ZNF383Q8NA42 475 aa14.96□□□□□ -0.01
SCARF1-205ENST00000571272 OR51H1Q8NH63 302 aa14.96□□□□□ -0.01
SCARF1-205ENST00000571272 ATP5SQ99766 215 aa14.96□□□□□ -0.01
SCARF1-205ENST00000571272 ZFP92A6NM28 416 aa14.96□□□□□ -0.01
SCARF1-205ENST00000571272 PCBD1P61457 104 aa14.96□□□□□ -0.01
SCARF1-205ENST00000571272 MPV17LQ2QL34 196 aa14.96□□□□□ -0.01
SCARF1-205ENST00000571272 RSG1Q9BU20 258 aa14.96□□□□□ -0.01
SCARF1-205ENST00000571272 GPR61Q9BZJ8 451 aa14.96□□□□□ -0.01
SCARF1-205ENST00000571272 A0A096LPE4 126 aa14.95□□□□□ -0.02
SCARF1-205ENST00000571272 A0A1W2PPZ6 126 aa14.95□□□□□ -0.02
SCARF1-205ENST00000571272 NAPSAO96009 420 aa14.95□□□□□ -0.02
SCARF1-205ENST00000571272 GLIPR1P48060 266 aa14.95□□□□□ -0.02
SCARF1-205ENST00000571272 MLF1P58340 268 aa14.95□□□□□ -0.02
SCARF1-205ENST00000571272 TAS2R30P59541 319 aa14.95□□□□□ -0.02
SCARF1-205ENST00000571272 BAXQ07812 192 aa14.95□□□□□ -0.02
SCARF1-205ENST00000571272 COL19A1Q14993 1142 aa14.95□□□□□ -0.02
SCARF1-205ENST00000571272 C17orf78Q8N4C9 275 aa14.95□□□□□ -0.02
SCARF1-205ENST00000571272 SPEM1Q8N4L4 309 aa14.95□□□□□ -0.02
SCARF1-205ENST00000571272 RNF115Q9Y4L5 304 aa14.95□□□□□ -0.02
SCARF1-205ENST00000571272 DIDO1Q9BTC0 2240 aaKnown RBP14.95□□□□□ -0.02
SCARF1-205ENST00000571272 LY86O95711 162 aa14.95□□□□□ -0.02
SCARF1-205ENST00000571272 PRDX4Q13162 271 aa14.95□□□□□ -0.02
SCARF1-205ENST00000571272 C4orf17Q53FE4 359 aa14.95□□□□□ -0.02
SCARF1-205ENST00000571272 FAM180AQ6UWF9 173 aa14.95□□□□□ -0.02
SCARF1-205ENST00000571272 AGBL5Q8NDL9 886 aa14.95□□□□□ -0.02
SCARF1-205ENST00000571272 RBMXL1Q96E39 390 aaKnown RBP14.95□□□□□ -0.02
SCARF1-205ENST00000571272 PGLYRP1O75594 196 aaPredicted RBP14.95□□□□□ -0.02
SCARF1-205ENST00000571272 SOD3P08294 240 aa14.95□□□□□ -0.02
SCARF1-205ENST00000571272 MMP7P09237 267 aaPredicted RBP14.95□□□□□ -0.02
SCARF1-205ENST00000571272 CLDN15P56746 228 aa14.95□□□□□ -0.02
SCARF1-205ENST00000571272 HLA-DRB3P79483 266 aa14.95□□□□□ -0.02
SCARF1-205ENST00000571272 LCN15Q6UWW0 184 aa14.95□□□□□ -0.02
SCARF1-205ENST00000571272 SAP25Q8TEE9 199 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms