RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 NTNG2Q96CW9 530 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 UHRF2Q96PU4 802 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 PDCD1LG2Q9BQ51 273 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 TCEAL7Q9BRU2 100 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 ALKBH7Q9BT30 221 aaPredicted RBP3.48□□□□□ -1.85
LINC00561-201ENST00000565815 XKR8Q9H6D3 395 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 TMEM100Q9NV29 134 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 TAS2R3Q9NYW6 316 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 MRM2Q9UI43 246 aaKnown RBP3.48□□□□□ -1.85
LINC00561-201ENST00000565815 CLEC4AQ9UMR7 237 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 COPS3Q9UNS2 423 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 PCYT1BQ9Y5K3 369 aaPredicted RBP3.48□□□□□ -1.85
LINC00561-201ENST00000565815 ABCA12Q86UK0 2595 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 A0A0J9YY10 115 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 A0A1B0GX78 115 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 LOC390937A0A1W2PQ73 354 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 TMEM218A2RU14 115 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 OR5H14A6NHG9 310 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 VSTM2BA6NLU5 285 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 RNF212BA8MTL3 300 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 CSTAP01040 98 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 IGHMP01871 453 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 APOC1P02654 83 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 APOC3P02656 99 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 S100A8P05109 93 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 ISG15P05161 165 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 CLUP10909 449 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 POU3F4P49335 361 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 STK11Q15831 433 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 ZNF74Q16587 644 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 TRMT12Q53H54 448 aaKnown RBP3.48□□□□□ -1.85
LINC00561-201ENST00000565815 C1orf100Q5SVJ3 147 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 LEG1Q6P5S2 330 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 C17orf107Q6ZR85 190 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 HMGN2P46Q86SG4 172 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 LYG2Q86SG7 212 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 SLC25A42Q86VD7 318 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 COMMD1Q8N668 190 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 SLC30A7Q8NEW0 376 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 STEAP2Q8NFT2 490 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 OR1M1Q8NGA1 313 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 OR5M1Q8NGP8 315 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 OR6K6Q8NGW6 343 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 OTOSQ8NHW6 89 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 FLVCR1-AS1Q8TAF5 88 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 FAM57AQ8TBR7 257 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 MITD1Q8WV92 249 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 FAM3DQ96BQ1 224 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 NARS2Q96I59 477 aaKnown RBP3.48□□□□□ -1.85
LINC00561-201ENST00000565815 VSTM2LQ96N03 204 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 OR8B4Q96RC9 309 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 PHB2Q99623 299 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 PDCD10Q9BUL8 212 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 SEC11CQ9BY50 192 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 NMES1Q9C002 83 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 MMP26Q9NRE1 261 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 SPHK1Q9NYA1 384 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 RAB22AQ9UL26 194 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 TEX15Q9BXT5 2789 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 HIVEP3Q5T1R4 2406 aa3.48□□□□□ -1.85
LINC00561-201ENST00000565815 MDC1Q14676 2089 aaKnown RBP3.47□□□□□ -1.85
LINC00561-201ENST00000565815 NSG1A0A0A6YYJ2 146 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 OR6C74A6NCV1 312 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 TVP23AA6NH52 213 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 ZNF736B4DX44 427 aaPredicted RBP3.47□□□□□ -1.85
LINC00561-201ENST00000565815 C19orf84I3L1E1 186 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 DFFBO76075 338 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 PRSS1P07477 247 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 ASAH2BP0C7U1 165 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 RNH1P13489 461 aaKnown RBP3.47□□□□□ -1.85
LINC00561-201ENST00000565815 RFC3P40938 356 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 PPICP45877 212 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 HCCSP53701 268 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 PPIAP62937 165 aaKnown RBP3.47□□□□□ -1.85
LINC00561-201ENST00000565815 ARL6IP1Q15041 203 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 DEFB134Q4QY38 66 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 DNM1P34Q6PK57 102 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 ZNF679Q8IYX0 411 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 OR52R1Q8NGF1 315 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 OR51S1Q8NGJ8 323 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 ANKRD9Q96BM1 317 aaPredicted RBP3.47□□□□□ -1.85
LINC00561-201ENST00000565815 NMNAT3Q96T66 252 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 UQCC2Q9BRT2 126 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 C5orf66Q9H5L9 145 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 BEX1Q9HBH7 125 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 C19orf25Q9UFG5 118 aaPredicted RBP3.47□□□□□ -1.85
LINC00561-201ENST00000565815 MLXQ9UH92 298 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 TRAV18A0A075B6X5 111 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 TRAV14DV4A0A0A6YYC5 116 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 A0A1W2PQD3 144 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 ZNF860A6NHJ4 632 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 A6NIZ1 184 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 ZNF98A6NK75 572 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 CEACAM18A8MTB9 384 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 XKRYO14609 159 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 RLN2P04090 185 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 GYPBP06028 91 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 ERCC1P07992 297 aaPredicted RBP3.47□□□□□ -1.85
LINC00561-201ENST00000565815 CD79AP11912 226 aa3.47□□□□□ -1.85
LINC00561-201ENST00000565815 IGFBP3P17936 291 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms