RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 FOXRED1Q96CU9 486 aaPredicted RBP12.45□□□□□ -0.42
CCNDBP1-203ENST00000562553 Q96M66 194 aa12.45□□□□□ -0.42
CCNDBP1-203ENST00000562553 CLEC7AQ9BXN2 247 aa12.45□□□□□ -0.42
CCNDBP1-203ENST00000562553 BARHL1Q9BZE3 327 aa12.45□□□□□ -0.42
CCNDBP1-203ENST00000562553 SELENOIQ9C0D9 397 aa12.45□□□□□ -0.42
CCNDBP1-203ENST00000562553 NCOR1P1Q9H4R4 102 aa12.45□□□□□ -0.42
CCNDBP1-203ENST00000562553 ZNF286AQ9HBT8 521 aa12.45□□□□□ -0.42
CCNDBP1-203ENST00000562553 CALYQ9NYX4 217 aa12.45□□□□□ -0.42
CCNDBP1-203ENST00000562553 RCC2Q9P258 522 aaKnown RBP12.45□□□□□ -0.42
CCNDBP1-203ENST00000562553 TBL2Q9Y4P3 447 aaKnown RBP12.45□□□□□ -0.42
CCNDBP1-203ENST00000562553 KBTBD11-OT1A0A1B0GTJ5 212 aa12.44□□□□□ -0.42
CCNDBP1-203ENST00000562553 CRYBA1P05813 215 aa12.44□□□□□ -0.42
CCNDBP1-203ENST00000562553 CD37P11049 281 aa12.44□□□□□ -0.42
CCNDBP1-203ENST00000562553 JUNBP17275 347 aaPredicted RBP12.44□□□□□ -0.42
CCNDBP1-203ENST00000562553 PSMA1P25786 263 aaKnown RBP12.44□□□□□ -0.42
CCNDBP1-203ENST00000562553 GABRA5P31644 462 aa12.44□□□□□ -0.42
CCNDBP1-203ENST00000562553 RAG2P55895 527 aa12.44□□□□□ -0.42
CCNDBP1-203ENST00000562553 LY6EQ16553 131 aa12.44□□□□□ -0.42
CCNDBP1-203ENST00000562553 SIGIRRQ6IA17 410 aa12.44□□□□□ -0.42
CCNDBP1-203ENST00000562553 SPARTQ8N0X7 666 aa12.44□□□□□ -0.42
CCNDBP1-203ENST00000562553 ABHD12Q8N2K0 398 aa12.44□□□□□ -0.42
CCNDBP1-203ENST00000562553 C3orf56Q8N813 242 aa12.44□□□□□ -0.42
CCNDBP1-203ENST00000562553 OR4P4Q8NGL7 312 aa12.44□□□□□ -0.42
CCNDBP1-203ENST00000562553 OR5R1Q8NH85 324 aa12.44□□□□□ -0.42
CCNDBP1-203ENST00000562553 MRPS24Q96EL2 167 aaKnown RBP12.44□□□□□ -0.42
CCNDBP1-203ENST00000562553 SLITRK2Q9H156 845 aa12.44□□□□□ -0.42
CCNDBP1-203ENST00000562553 MRPS14O60783 128 aaKnown RBP12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 NDUFA7O95182 113 aa12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 MPIG6BO95866 241 aa12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 IL1AP01583 271 aa12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 VSIG8P0DPA2 414 aa12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 CALRP27797 417 aaKnown RBP12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 SSTR5P35346 364 aa12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 SSX2Q16385 188 aa12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 UBE2UQ5VVX9 321 aa12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 SLC35E4Q6ICL7 350 aa12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 OR52W1Q6IF63 320 aa12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 GDPGP1Q6ZNW5 385 aa12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 SVOPQ8N4V2 548 aa12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 SGMS2Q8NHU3 365 aa12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 RFESDQ8TAC1 157 aa12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 PIFOQ8TCI5 191 aa12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 NEK7Q8TDX7 302 aa12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 KIRREL1Q96J84 757 aa12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 YTHDF1Q9BYJ9 559 aaKnown RBP12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 NDUFB11Q9NX14 153 aa12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 GHRLQ9UBU3 117 aa12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 AK6Q9Y3D8 172 aaKnown RBP12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 HILPDAQ9Y5L2 63 aa12.43□□□□□ -0.42
CCNDBP1-203ENST00000562553 TMEM30CPA0ZSE6 113 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 SLC22A1O15245 554 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 ARL6IP5O75915 188 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 UBBP0CG47 229 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 NFYBP25208 207 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 HTR2CP28335 458 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 CD34P28906 385 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 RAB13P51153 203 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 RPL15P61313 204 aaKnown RBP12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 UNC119Q13432 240 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 FAM189A2Q15884 450 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 AANATQ16613 207 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 LTC4SQ16873 150 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 MINOS1Q5TGZ0 78 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 DHRS7BQ6IAN0 325 aaPredicted RBP12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 RAB12Q6IQ22 244 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 ZNF497Q6ZNH5 498 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 ZNF565Q8N9K5 539 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 UBALD1Q8TB05 177 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 NDNFQ8TB73 568 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 CCDC107Q8WV48 283 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 MALSU1Q96EH3 234 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 LINC00574Q9H8X3 128 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 SPACA1Q9HBV2 294 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 IDI2-AS1Q9NZ38 188 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 LRRC42Q9Y546 428 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 PEX16Q9Y5Y5 336 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 MINOS1-NBL1R4GNA1 71 aa12.42□□□□□ -0.42
CCNDBP1-203ENST00000562553 A0A087X0M5 115 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 A0A1B0GX30 115 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 SHISA3A0PJX4 238 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 FAM90A10PA6NDY2 464 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 FAM90A18PA6NE21 464 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 FAM90A16PA6NEW6 464 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 FAM90A20PA6NIJ5 464 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 FAM90A7PA6NKC0 464 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 VGLL3A8MV65 326 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 FAM90A22PA8MWA6 464 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 FAM90A12PA8MX19 464 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 FAM90A5PA8MXJ8 464 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 FAM90A23PA8MXZ1 464 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 NPIPB11E5RHQ5 1161 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 IGLV1-47P01700 117 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 IGHV3-7P01780 117 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 MT-ND4P03905 459 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 FAM90A15PP0C7V4 464 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 FAM90A13PP0C7W8 464 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 FAM90A14PP0C7W9 464 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 FAM90A24PP0C7X0 464 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 PSMB9P28065 219 aa12.41□□□□□ -0.42
CCNDBP1-203ENST00000562553 QRFPP83859 136 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms