RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 AKR1E2Q96JD6 320 aa10.79□□□□□ -0.68
USB1-205ENST00000561743 PGLYRP3Q96LB9 341 aa10.79□□□□□ -0.68
USB1-205ENST00000561743 SLC25A33Q9BSK2 321 aa10.79□□□□□ -0.68
USB1-205ENST00000561743 DPCDQ9BVM2 203 aaPredicted RBP10.79□□□□□ -0.68
USB1-205ENST00000561743 METTL9Q9H1A3 318 aa10.79□□□□□ -0.68
USB1-205ENST00000561743 MMP28Q9H239 520 aa10.79□□□□□ -0.68
USB1-205ENST00000561743 IFT22Q9H7X7 185 aa10.79□□□□□ -0.68
USB1-205ENST00000561743 IDI2-AS1Q9NZ38 188 aa10.79□□□□□ -0.68
USB1-205ENST00000561743 ING4Q9UNL4 249 aa10.79□□□□□ -0.68
USB1-205ENST00000561743 TRAV8-7A0A075B6U6 113 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 TRAV39A0A0B4J263 110 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 OOSP1A8MZH6 123 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 NPIPB11E5RHQ5 1161 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 J3QR06 171 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 GEMIN2O14893 280 aaKnown RBP10.78□□□□□ -0.68
USB1-205ENST00000561743 OR2F2O95006 317 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 IGHV3-7P01780 117 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 AMY1AP04745 511 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 AMY2AP04746 511 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 GNAO1P09471 354 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 SERPINA2P20848 420 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 C21orf33P30042 268 aaPredicted RBP10.78□□□□□ -0.68
USB1-205ENST00000561743 SSTR5P35346 364 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 ST3GAL4Q11206 333 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 RIPK1Q13546 671 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 BEAN1Q3B7T3 259 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 Q499Y3 187 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 ABCA11PQ4W5N1 156 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 YIF1BQ5BJH7 314 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 SAMD5Q5TGI4 173 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 LAIR2Q6ISS4 152 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 CCDC144NLQ6NUI1 221 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 OSR2Q8N2R0 312 aa10.78□□□□□ -0.68
USB1-205ENST00000561743 RBM14Q96PK6 669 aaKnown RBP10.78□□□□□ -0.68
USB1-205ENST00000561743 ZNF184Q99676 751 aaPredicted RBP10.78□□□□□ -0.68
USB1-205ENST00000561743 A0A1W2PP11 408 aa10.77□□□□□ -0.69
USB1-205ENST00000561743 GPX5O75715 221 aa10.77□□□□□ -0.69
USB1-205ENST00000561743 OR7C1O76099 320 aaPredicted RBP10.77□□□□□ -0.69
USB1-205ENST00000561743 CSTBP04080 98 aaKnown RBP10.77□□□□□ -0.69
USB1-205ENST00000561743 FSTP19883 344 aa10.77□□□□□ -0.69
USB1-205ENST00000561743 CAPGP40121 348 aa10.77□□□□□ -0.69
USB1-205ENST00000561743 MNDAP41218 407 aa10.77□□□□□ -0.69
USB1-205ENST00000561743 EMX1Q04741 257 aaPredicted RBP10.77□□□□□ -0.69
USB1-205ENST00000561743 MED21Q13503 144 aa10.77□□□□□ -0.69
USB1-205ENST00000561743 DOC2BQ14184 412 aa10.77□□□□□ -0.69
USB1-205ENST00000561743 LTC4SQ16873 150 aa10.77□□□□□ -0.69
USB1-205ENST00000561743 KPRPQ5T749 579 aaPredicted RBP10.77□□□□□ -0.69
USB1-205ENST00000561743 LINC00596Q86U02 117 aa10.77□□□□□ -0.69
USB1-205ENST00000561743 OR5AU1Q8NGC0 362 aa10.77□□□□□ -0.69
USB1-205ENST00000561743 RFESDQ8TAC1 157 aa10.77□□□□□ -0.69
USB1-205ENST00000561743 CAPSLQ8WWF8 208 aa10.77□□□□□ -0.69
USB1-205ENST00000561743 TOMM40LQ969M1 308 aa10.77□□□□□ -0.69
USB1-205ENST00000561743 RPEQ96AT9 228 aa10.77□□□□□ -0.69
USB1-205ENST00000561743 OR14A2Q96R54 314 aa10.77□□□□□ -0.69
USB1-205ENST00000561743 PAK1IP1Q9NWT1 392 aaPredicted RBP10.77□□□□□ -0.69
USB1-205ENST00000561743 CHCHD3Q9NX63 227 aaKnown RBP10.77□□□□□ -0.69
USB1-205ENST00000561743 CKLFQ9UBR5 152 aa10.77□□□□□ -0.69
USB1-205ENST00000561743 PSG11Q9UQ72 335 aa10.77□□□□□ -0.69
USB1-205ENST00000561743 AMMECR1Q9Y4X0 333 aaPredicted RBP10.77□□□□□ -0.69
USB1-205ENST00000561743 HSPE1-MOB4S4R3N1 261 aa10.77□□□□□ -0.69
USB1-205ENST00000561743 TRBV5-7A0A0A0MS05 114 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 PNMA8CA0A1B0GUJ8 204 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 A0A1W2PPI3 338 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 FAM90A18PA6NE21 464 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 FAM90A16PA6NEW6 464 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 FAM90A20PA6NIJ5 464 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 SH2D7A6NKC9 451 aaPredicted RBP10.76□□□□□ -0.69
USB1-205ENST00000561743 FAM90A9PA6NNJ1 464 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 FAM90A12PA8MX19 464 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 FAM90A5PA8MXJ8 464 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 XPNPEP2O43895 674 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 ZNF780AO75290 641 aaPredicted RBP10.76□□□□□ -0.69
USB1-205ENST00000561743 LPLP06858 475 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 FAM90A15PP0C7V4 464 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 FAM90A13PP0C7W8 464 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 FAM90A14PP0C7W9 464 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 FAM90A24PP0C7X0 464 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 GNG10P50151 68 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 CD83Q01151 205 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 DIAPH2-AS1Q14236 149 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 MPV17LQ2QL34 196 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 SLC22A6Q4U2R8 563 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 TCTEX1D4Q5JR98 221 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 OGFRL1Q5TC84 451 aaPredicted RBP10.76□□□□□ -0.69
USB1-205ENST00000561743 C8orf59Q8N0T1 100 aaPredicted RBP10.76□□□□□ -0.69
USB1-205ENST00000561743 OR4F17Q8NGA8 305 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 OR10A7Q8NGE5 316 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 FBLIM1Q8WUP2 373 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 R3HDM4Q96D70 268 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 OR4F4Q96R69 305 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 S100A13Q99584 98 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 PCDHB16Q9NRJ7 776 aa10.76□□□□□ -0.69
USB1-205ENST00000561743 CNOT2Q9NZN8 540 aaKnown RBP10.76□□□□□ -0.69
USB1-205ENST00000561743 A0A1W2PPK0 400 aa10.75□□□□□ -0.69
USB1-205ENST00000561743 TMEM30CPA0ZSE6 113 aa10.75□□□□□ -0.69
USB1-205ENST00000561743 EFCAB10A6NFE3 127 aa10.75□□□□□ -0.69
USB1-205ENST00000561743 CASQ2O14958 399 aaPredicted RBP10.75□□□□□ -0.69
USB1-205ENST00000561743 SNRNP70P08621 437 aaKnown RBP10.75□□□□□ -0.69
USB1-205ENST00000561743 FAM106CPP0CH98 169 aa10.75□□□□□ -0.69
USB1-205ENST00000561743 GTF2F2P13984 249 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms