RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 ZNF283Q8N7M2 679 aa0.02□□□□□ -2.41
CASC4-211ENST00000561305 MBOAT7Q96N66 472 aa0.02□□□□□ -2.41
CASC4-211ENST00000561305 ZNF471Q9BX82 626 aaPredicted RBP0.02□□□□□ -2.41
CASC4-211ENST00000561305 PECRQ9BY49 303 aa0.02□□□□□ -2.41
CASC4-211ENST00000561305 SMDT1Q9H4I9 107 aa0.02□□□□□ -2.41
CASC4-211ENST00000561305 WDR55Q9H6Y2 383 aaPredicted RBP0.02□□□□□ -2.41
CASC4-211ENST00000561305 IGKV1-9A0A0C4DH69 117 aa0.01□□□□□ -2.41
CASC4-211ENST00000561305 H7C2Y5 167 aa0.01□□□□□ -2.41
CASC4-211ENST00000561305 DENRO43583 198 aaKnown RBP0.01□□□□□ -2.41
CASC4-211ENST00000561305 SOD1P00441 154 aa0.01□□□□□ -2.41
CASC4-211ENST00000561305 GPR4P46093 362 aa0.01□□□□□ -2.41
CASC4-211ENST00000561305 NXNL2Q5VZ03 156 aa0.01□□□□□ -2.41
CASC4-211ENST00000561305 OR5T3Q8NGG3 340 aa0.01□□□□□ -2.41
CASC4-211ENST00000561305 C11orf70Q9BRQ4 267 aa0.01□□□□□ -2.41
CASC4-211ENST00000561305 ANP32EQ9BTT0 268 aa0.01□□□□□ -2.41
CASC4-211ENST00000561305 ZNF426Q9BUY5 554 aa0.01□□□□□ -2.41
CASC4-211ENST00000561305 CLSTN2Q9H4D0 955 aa0.01□□□□□ -2.41
CASC4-211ENST00000561305 HPCAL4Q9UM19 191 aa0.01□□□□□ -2.41
CASC4-211ENST00000561305 PSMD13Q9UNM6 376 aa0.01□□□□□ -2.41
CASC4-211ENST00000561305 PTPRJQ12913 1337 aa0.01□□□□□ -2.41
CASC4-211ENST00000561305 ADAMTSL3P82987 1691 aa0.01□□□□□ -2.41
CASC4-211ENST00000561305 FREM1Q5H8C1 2179 aa0.01□□□□□ -2.41
CASC4-211ENST00000561305 ZFHX2Q9C0A1 2572 aaPredicted RBP0□□□□□ -2.41
CASC4-211ENST00000561305 TRAV8-3A0A0A6YYJ7 113 aa0□□□□□ -2.41
CASC4-211ENST00000561305 M0QXV9 152 aa0□□□□□ -2.41
CASC4-211ENST00000561305 NQO1P15559 274 aaKnown RBP0□□□□□ -2.41
CASC4-211ENST00000561305 GABRR2P28476 465 aa0□□□□□ -2.41
CASC4-211ENST00000561305 LPAR6P43657 344 aa0□□□□□ -2.41
CASC4-211ENST00000561305 RPL31P62899 125 aaKnown RBP0□□□□□ -2.41
CASC4-211ENST00000561305 SLC35B1P78383 322 aa0□□□□□ -2.41
CASC4-211ENST00000561305 TSPAN31Q12999 210 aa0□□□□□ -2.41
CASC4-211ENST00000561305 SKP2Q13309 424 aa0□□□□□ -2.41
CASC4-211ENST00000561305 FAT4Q6V0I7 4981 aa0□□□□□ -2.41
CASC4-211ENST00000561305 CCDC121Q6ZUS5 278 aa0□□□□□ -2.41
CASC4-211ENST00000561305 SSX7Q7RTT5 188 aa0□□□□□ -2.41
CASC4-211ENST00000561305 SLX4Q8IY92 1834 aa0□□□□□ -2.41
CASC4-211ENST00000561305 GAPTQ8N292 157 aa0□□□□□ -2.41
CASC4-211ENST00000561305 NDNFQ8TB73 568 aa0□□□□□ -2.41
CASC4-211ENST00000561305 C16orf78Q8WTQ4 265 aa0□□□□□ -2.41
CASC4-211ENST00000561305 SLC35G5Q96KT7 338 aa0□□□□□ -2.41
CASC4-211ENST00000561305 USH1CQ9Y6N9 552 aa0□□□□□ -2.41
CASC4-211ENST00000561305 IGHV2-26A0A0B4J1V2 119 aa-0.01□□□□□ -2.41
CASC4-211ENST00000561305 TRAV25A0A0B4J276 109 aa-0.01□□□□□ -2.41
CASC4-211ENST00000561305 IGKV1-12A0A0C4DH73 117 aa-0.01□□□□□ -2.41
CASC4-211ENST00000561305 RBFOX3A6NFN3 312 aa-0.01□□□□□ -2.41
CASC4-211ENST00000561305 ARGFXA6NJG6 315 aa-0.01□□□□□ -2.41
CASC4-211ENST00000561305 ALOX12BO75342 701 aa-0.01□□□□□ -2.41
CASC4-211ENST00000561305 ERLIN1O75477 346 aa-0.01□□□□□ -2.41
CASC4-211ENST00000561305 MYO1DO94832 1006 aa-0.01□□□□□ -2.41
CASC4-211ENST00000561305 IGKV1D-12P01611 117 aa-0.01□□□□□ -2.41
CASC4-211ENST00000561305 RPS5P46782 204 aaKnown RBP-0.01□□□□□ -2.41
CASC4-211ENST00000561305 PLTPP55058 493 aa-0.01□□□□□ -2.41
CASC4-211ENST00000561305 TAS2R60P59551 318 aa-0.01□□□□□ -2.41
CASC4-211ENST00000561305 RELAQ04206 551 aa-0.01□□□□□ -2.41
CASC4-211ENST00000561305 AGTRAPQ6RW13 159 aa-0.01□□□□□ -2.41
CASC4-211ENST00000561305 CCDC148Q8NFR7 591 aa-0.01□□□□□ -2.41
CASC4-211ENST00000561305 OR51A7Q8NH64 312 aa-0.01□□□□□ -2.41
CASC4-211ENST00000561305 PIH1D2Q8WWB5 315 aa-0.01□□□□□ -2.41
CASC4-211ENST00000561305 BCL2L14Q9BZR8 327 aa-0.01□□□□□ -2.41
CASC4-211ENST00000561305 C16orf95Q9H693 158 aa-0.01□□□□□ -2.41
CASC4-211ENST00000561305 ZMAT5Q9UDW3 170 aaKnown RBP-0.01□□□□□ -2.41
CASC4-211ENST00000561305 PLCH2O75038 1416 aa-0.02□□□□□ -2.41
CASC4-211ENST00000561305 SYNJ2BP-COX16A0A087WUM0 186 aa-0.02□□□□□ -2.41
CASC4-211ENST00000561305 IGKV2D-26A0A0A0MRZ7 120 aa-0.02□□□□□ -2.41
CASC4-211ENST00000561305 RNASEK-C17orf49H0YIS7 233 aa-0.02□□□□□ -2.41
CASC4-211ENST00000561305 OR4A8P0C604 315 aa-0.02□□□□□ -2.41
CASC4-211ENST00000561305 RAP1GDS1P52306 607 aa-0.02□□□□□ -2.41
CASC4-211ENST00000561305 RCN1Q15293 331 aa-0.02□□□□□ -2.41
CASC4-211ENST00000561305 ACTBL2Q562R1 376 aa-0.02□□□□□ -2.41
CASC4-211ENST00000561305 GPATCH11Q8N954 259 aa-0.02□□□□□ -2.41
CASC4-211ENST00000561305 SPPL2BQ8TCT7 592 aa-0.02□□□□□ -2.41
CASC4-211ENST00000561305 PDCD6IPQ8WUM4 868 aaKnown RBP-0.02□□□□□ -2.41
CASC4-211ENST00000561305 GTF2H4Q92759 462 aa-0.02□□□□□ -2.41
CASC4-211ENST00000561305 ZNF514Q96K75 400 aaPredicted RBP-0.02□□□□□ -2.41
CASC4-211ENST00000561305 GLT1D1Q96MS3 346 aa-0.02□□□□□ -2.41
CASC4-211ENST00000561305 AHSPQ9NZD4 102 aa-0.02□□□□□ -2.41
CASC4-211ENST00000561305 PUS1Q9Y606 427 aaKnown RBP eCLIP-0.02□□□□□ -2.41
CASC4-211ENST00000561305 GPR98Q8WXG9 6306 aa-0.02□□□□□ -2.41
CASC4-211ENST00000561305 CACNA1BQ00975 2339 aa-0.03□□□□□ -2.41
CASC4-211ENST00000561305 ATAD5Q96QE3 1844 aa-0.03□□□□□ -2.41
CASC4-211ENST00000561305 IGHV3-15A0A0B4J1V0 119 aa-0.03□□□□□ -2.41
CASC4-211ENST00000561305 A0A1W2PRF3 423 aa-0.03□□□□□ -2.41
CASC4-211ENST00000561305 A0A1W2PRM7 423 aa-0.03□□□□□ -2.41
CASC4-211ENST00000561305 TMEM250H0YL14 139 aa-0.03□□□□□ -2.41
CASC4-211ENST00000561305 MPHOSPH10O00566 681 aaKnown RBP-0.03□□□□□ -2.41
CASC4-211ENST00000561305 TOR1AO14656 332 aa-0.03□□□□□ -2.41
CASC4-211ENST00000561305 GATCO43716 136 aaKnown RBP-0.03□□□□□ -2.41
CASC4-211ENST00000561305 PMCHP20382 165 aa-0.03□□□□□ -2.41
CASC4-211ENST00000561305 INPP1P49441 399 aa-0.03□□□□□ -2.41
CASC4-211ENST00000561305 PLCXD3Q63HM9 321 aa-0.03□□□□□ -2.41
CASC4-211ENST00000561305 OFCC1Q8IZS5 231 aa-0.03□□□□□ -2.41
CASC4-211ENST00000561305 LHFPL5Q8TAF8 219 aa-0.03□□□□□ -2.41
CASC4-211ENST00000561305 FAM131CQ96AQ9 280 aa-0.03□□□□□ -2.41
CASC4-211ENST00000561305 ODF3Q96PU9 254 aa-0.03□□□□□ -2.41
CASC4-211ENST00000561305 UPK3BQ9BT76 320 aa-0.03□□□□□ -2.41
CASC4-211ENST00000561305 C22orf24Q9Y442 160 aa-0.03□□□□□ -2.41
CASC4-211ENST00000561305 KIAA2026Q5HYC2 2103 aa-0.04□□□□□ -2.42
CASC4-211ENST00000561305 ZNF532Q9HCE3 1301 aa-0.04□□□□□ -2.42
CASC4-211ENST00000561305 TRBV6-5A0A0K0K1A5 114 aa-0.04□□□□□ -2.42
CASC4-211ENST00000561305 ZNF705FA8MVS1 300 aaPredicted RBP-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms