RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 OR52W1Q6IF63 320 aa16.54■□□□□ 0.24
VTI1B-205ENST00000555543 BRICD5Q6PL45 260 aa16.54■□□□□ 0.24
VTI1B-205ENST00000555543 CCBE1Q6UXH8 406 aaPredicted RBP16.54■□□□□ 0.24
VTI1B-205ENST00000555543 LINC00596Q86U02 117 aa16.54■□□□□ 0.24
VTI1B-205ENST00000555543 CDH26Q8IXH8 852 aa16.54■□□□□ 0.24
VTI1B-205ENST00000555543 NKAIN3Q8N8D7 197 aa16.54■□□□□ 0.24
VTI1B-205ENST00000555543 NDNFQ8TB73 568 aa16.54■□□□□ 0.24
VTI1B-205ENST00000555543 KIRREL1Q96J84 757 aa16.54■□□□□ 0.24
VTI1B-205ENST00000555543 BARHL1Q9BZE3 327 aa16.54■□□□□ 0.24
VTI1B-205ENST00000555543 NCOR1P1Q9H4R4 102 aa16.54■□□□□ 0.24
VTI1B-205ENST00000555543 CALYQ9NYX4 217 aa16.54■□□□□ 0.24
VTI1B-205ENST00000555543 CMYA5Q8N3K9 4069 aa16.54■□□□□ 0.24
VTI1B-205ENST00000555543 VWFP04275 2813 aa16.54■□□□□ 0.24
VTI1B-205ENST00000555543 IGLV1-47P01700 117 aa16.53■□□□□ 0.24
VTI1B-205ENST00000555543 MAP2K4P45985 399 aa16.53■□□□□ 0.24
VTI1B-205ENST00000555543 LRRTM1Q86UE6 522 aa16.53■□□□□ 0.24
VTI1B-205ENST00000555543 TMEM104Q8NE00 496 aa16.53■□□□□ 0.24
VTI1B-205ENST00000555543 MRGPRDQ8TDS7 321 aa16.53■□□□□ 0.24
VTI1B-205ENST00000555543 UFD1Q92890 307 aa16.53■□□□□ 0.24
VTI1B-205ENST00000555543 CYYR1Q96J86 154 aa16.53■□□□□ 0.24
VTI1B-205ENST00000555543 CCDC90BQ9GZT6 254 aa16.53■□□□□ 0.24
VTI1B-205ENST00000555543 BANF2Q9H503 90 aa16.53■□□□□ 0.24
VTI1B-205ENST00000555543 TCF19Q9Y242 345 aa16.53■□□□□ 0.24
VTI1B-205ENST00000555543 A0A087X0M5 115 aa16.52■□□□□ 0.24
VTI1B-205ENST00000555543 A0A1B0GX30 115 aa16.52■□□□□ 0.24
VTI1B-205ENST00000555543 IL1AP01583 271 aa16.52■□□□□ 0.24
VTI1B-205ENST00000555543 HSMCR30P0CW71 290 aa16.52■□□□□ 0.24
VTI1B-205ENST00000555543 HTR1DP28221 377 aa16.52■□□□□ 0.24
VTI1B-205ENST00000555543 SSTR5P35346 364 aa16.52■□□□□ 0.24
VTI1B-205ENST00000555543 GPR50Q13585 617 aa16.52■□□□□ 0.24
VTI1B-205ENST00000555543 GPR176Q14439 515 aa16.52■□□□□ 0.24
VTI1B-205ENST00000555543 ATAD3CQ5T2N8 411 aa16.52■□□□□ 0.24
VTI1B-205ENST00000555543 PRSS48Q7RTY5 328 aa16.52■□□□□ 0.24
VTI1B-205ENST00000555543 RTN4RL2Q86UN3 420 aa16.52■□□□□ 0.24
VTI1B-205ENST00000555543 TMEM219Q86XT9 240 aa16.52■□□□□ 0.24
VTI1B-205ENST00000555543 TMEM203Q969S6 136 aa16.52■□□□□ 0.24
VTI1B-205ENST00000555543 CITED1Q99966 193 aa16.52■□□□□ 0.24
VTI1B-205ENST00000555543 UQCC2Q9BRT2 126 aa16.52■□□□□ 0.24
VTI1B-205ENST00000555543 LINC00574Q9H8X3 128 aa16.52■□□□□ 0.24
VTI1B-205ENST00000555543 PCDHB16Q9NRJ7 776 aa16.52■□□□□ 0.24
VTI1B-205ENST00000555543 ABCB10Q9NRK6 738 aa16.52■□□□□ 0.24
VTI1B-205ENST00000555543 RCC2Q9P258 522 aaKnown RBP16.52■□□□□ 0.24
VTI1B-205ENST00000555543 SIGLEC9Q9Y336 463 aa16.52■□□□□ 0.24
VTI1B-205ENST00000555543 A6NDX4 124 aa16.51■□□□□ 0.23
VTI1B-205ENST00000555543 UCHL1P09936 223 aa16.51■□□□□ 0.23
VTI1B-205ENST00000555543 NFYBP25208 207 aa16.51■□□□□ 0.23
VTI1B-205ENST00000555543 DYNLT3P51808 116 aa16.51■□□□□ 0.23
VTI1B-205ENST00000555543 RPS25P62851 125 aaKnown RBP16.51■□□□□ 0.23
VTI1B-205ENST00000555543 TPBGQ13641 420 aa16.51■□□□□ 0.23
VTI1B-205ENST00000555543 RBM48Q5RL73 367 aaKnown RBP16.51■□□□□ 0.23
VTI1B-205ENST00000555543 PRR31Q5SQ13 230 aa16.51■□□□□ 0.23
VTI1B-205ENST00000555543 CEACAM19Q7Z692 300 aa16.51■□□□□ 0.23
VTI1B-205ENST00000555543 ZNF565Q8N9K5 539 aa16.51■□□□□ 0.23
VTI1B-205ENST00000555543 RFESDQ8TAC1 157 aa16.51■□□□□ 0.23
VTI1B-205ENST00000555543 TCF7L1Q9HCS4 588 aa16.51■□□□□ 0.23
VTI1B-205ENST00000555543 RAB26Q9ULW5 256 aa16.51■□□□□ 0.23
VTI1B-205ENST00000555543 NPIPB11E5RHQ5 1161 aa16.5■□□□□ 0.23
VTI1B-205ENST00000555543 CRTAPO75718 401 aaPredicted RBP16.5■□□□□ 0.23
VTI1B-205ENST00000555543 MGMTP16455 207 aa16.5■□□□□ 0.23
VTI1B-205ENST00000555543 GABRA5P31644 462 aa16.5■□□□□ 0.23
VTI1B-205ENST00000555543 LTC4SQ16873 150 aa16.5■□□□□ 0.23
VTI1B-205ENST00000555543 HLA-DRB5Q30154 266 aa16.5■□□□□ 0.23
VTI1B-205ENST00000555543 TMEM91Q6ZNR0 172 aa16.5■□□□□ 0.23
VTI1B-205ENST00000555543 LIAT1Q6ZQX7 453 aa16.5■□□□□ 0.23
VTI1B-205ENST00000555543 ZNF596Q8TC21 504 aa16.5■□□□□ 0.23
VTI1B-205ENST00000555543 PHYHIPQ92561 330 aa16.5■□□□□ 0.23
VTI1B-205ENST00000555543 LEAP2Q969E1 77 aa16.5■□□□□ 0.23
VTI1B-205ENST00000555543 MRPS24Q96EL2 167 aaKnown RBP16.5■□□□□ 0.23
VTI1B-205ENST00000555543 Q96M66 194 aa16.5■□□□□ 0.23
VTI1B-205ENST00000555543 SELENOIQ9C0D9 397 aa16.5■□□□□ 0.23
VTI1B-205ENST00000555543 ZNF696Q9H7X3 374 aa16.5■□□□□ 0.23
VTI1B-205ENST00000555543 RAB18Q9NP72 206 aa16.5■□□□□ 0.23
VTI1B-205ENST00000555543 ISYNA1Q9NPH2 558 aa16.5■□□□□ 0.23
VTI1B-205ENST00000555543 IDI2-AS1Q9NZ38 188 aa16.5■□□□□ 0.23
VTI1B-205ENST00000555543 DPM3Q9P2X0 92 aa16.5■□□□□ 0.23
VTI1B-205ENST00000555543 TMEM30CPA0ZSE6 113 aa16.49■□□□□ 0.23
VTI1B-205ENST00000555543 F2RL2O00254 374 aa16.49■□□□□ 0.23
VTI1B-205ENST00000555543 IGHV3-7P01780 117 aa16.49■□□□□ 0.23
VTI1B-205ENST00000555543 MLLT11Q13015 90 aaPredicted RBP16.49■□□□□ 0.23
VTI1B-205ENST00000555543 HSD17B12Q53GQ0 312 aa16.49■□□□□ 0.23
VTI1B-205ENST00000555543 OR4C13Q8NGP0 309 aa16.49■□□□□ 0.23
VTI1B-205ENST00000555543 NEK7Q8TDX7 302 aa16.49■□□□□ 0.23
VTI1B-205ENST00000555543 FAM46BQ96A09 425 aa16.49■□□□□ 0.23
VTI1B-205ENST00000555543 FBLN5Q9UBX5 448 aa16.49■□□□□ 0.23
VTI1B-205ENST00000555543 BUB1B-PAK6H3BSN5 160 aa16.48■□□□□ 0.23
VTI1B-205ENST00000555543 CPEP16870 476 aa16.48■□□□□ 0.23
VTI1B-205ENST00000555543 SRMP19623 302 aa16.48■□□□□ 0.23
VTI1B-205ENST00000555543 RBM39Q14498 530 aaKnown RBP16.48■□□□□ 0.23
VTI1B-205ENST00000555543 TBCEQ15813 527 aaPredicted RBP16.48■□□□□ 0.23
VTI1B-205ENST00000555543 FBLN7Q53RD9 439 aa16.48■□□□□ 0.23
VTI1B-205ENST00000555543 C1orf100Q5SVJ3 147 aa16.48■□□□□ 0.23
VTI1B-205ENST00000555543 SIGIRRQ6IA17 410 aa16.48■□□□□ 0.23
VTI1B-205ENST00000555543 RAB12Q6IQ22 244 aa16.48■□□□□ 0.23
VTI1B-205ENST00000555543 ZNF497Q6ZNH5 498 aa16.48■□□□□ 0.23
VTI1B-205ENST00000555543 OR9G1Q8NH87 305 aa16.48■□□□□ 0.23
VTI1B-205ENST00000555543 UBALD1Q8TB05 177 aa16.48■□□□□ 0.23
VTI1B-205ENST00000555543 MGLLQ99685 303 aa16.48■□□□□ 0.23
VTI1B-205ENST00000555543 KCNK15Q9H427 330 aa16.48■□□□□ 0.23
VTI1B-205ENST00000555543 RANBP3Q9H6Z4 567 aaPredicted RBP16.48■□□□□ 0.23
VTI1B-205ENST00000555543 SPACA1Q9HBV2 294 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms