RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 MISP3Q96FF7 219 aa11.97□□□□□ -0.49
SCNN1A-215ENST00000540037 SIRT7Q9NRC8 400 aa11.97□□□□□ -0.49
SCNN1A-215ENST00000540037 RPRMQ9NS64 109 aa11.97□□□□□ -0.49
SCNN1A-215ENST00000540037 ADAMTS20P59510 1910 aa11.97□□□□□ -0.49
SCNN1A-215ENST00000540037 SNRPCP09234 159 aaKnown RBP11.96□□□□□ -0.49
SCNN1A-215ENST00000540037 ID3Q02535 119 aa11.96□□□□□ -0.49
SCNN1A-215ENST00000540037 ZNF726P1Q15940 193 aa11.96□□□□□ -0.49
SCNN1A-215ENST00000540037 ASCL4Q6XD76 172 aa11.96□□□□□ -0.49
SCNN1A-215ENST00000540037 LHFPL2Q6ZUX7 228 aa11.96□□□□□ -0.49
SCNN1A-215ENST00000540037 MAML2Q8IZL2 1156 aaPredicted RBP11.96□□□□□ -0.49
SCNN1A-215ENST00000540037 ZNF611Q8N823 705 aa11.96□□□□□ -0.49
SCNN1A-215ENST00000540037 C10orf35Q96D05 121 aa11.96□□□□□ -0.49
SCNN1A-215ENST00000540037 CRIM1Q9NZV1 1036 aa11.96□□□□□ -0.49
SCNN1A-215ENST00000540037 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.96□□□□□ -0.5
SCNN1A-215ENST00000540037 A0A0J9YW62 118 aa11.96□□□□□ -0.5
SCNN1A-215ENST00000540037 DKK1O94907 266 aa11.96□□□□□ -0.5
SCNN1A-215ENST00000540037 CCL3P10147 92 aa11.96□□□□□ -0.5
SCNN1A-215ENST00000540037 TLE4Q04727 773 aa11.96□□□□□ -0.5
SCNN1A-215ENST00000540037 EXT1Q16394 746 aa11.96□□□□□ -0.5
SCNN1A-215ENST00000540037 FAM27BQ5VT28 67 aa11.96□□□□□ -0.5
SCNN1A-215ENST00000540037 FOXL2NBQ6ZUU3 175 aa11.96□□□□□ -0.5
SCNN1A-215ENST00000540037 REC114Q7Z4M0 266 aa11.96□□□□□ -0.5
SCNN1A-215ENST00000540037 C1orf87Q8N0U7 546 aa11.96□□□□□ -0.5
SCNN1A-215ENST00000540037 OR1F12Q8NHA8 337 aa11.96□□□□□ -0.5
SCNN1A-215ENST00000540037 RNF115Q9Y4L5 304 aa11.96□□□□□ -0.5
SCNN1A-215ENST00000540037 SLC22A20A6NK97 555 aa11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 GLB1P16278 677 aa11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 ZNF385CQ66K41 422 aaPredicted RBP11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 SLC25A24Q6NUK1 477 aa11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 OR8G5Q8NG78 346 aa11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 EXTL1Q92935 676 aa11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 GNPNAT1Q96EK6 184 aaPredicted RBP11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 IGKV1-6A0A0C4DH72 117 aa11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 TAS2R30P59541 319 aa11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 SLC23A3Q6PIS1 610 aa11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 ATP5SQ99766 215 aa11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 A0A087WZY1 265 aa11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 A0A1B0GU03 582 aa11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 APLNRP35414 380 aa11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 PKIAP61925 76 aa11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 MRPS34P82930 218 aaKnown RBP11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 PSG4Q00888 419 aa11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 BEND4Q6ZU67 534 aa11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 SYT13Q7L8C5 426 aa11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 OR51H1Q8NH63 302 aa11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 RBMXL1Q96E39 390 aaKnown RBP11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 CA14Q9ULX7 337 aa11.95□□□□□ -0.5
SCNN1A-215ENST00000540037 ELOA3CA0A087WX78 387 aaPredicted RBP11.94□□□□□ -0.5
SCNN1A-215ENST00000540037 ZIC3O60481 467 aa11.94□□□□□ -0.5
SCNN1A-215ENST00000540037 IGHV3-9P01782 118 aa11.94□□□□□ -0.5
SCNN1A-215ENST00000540037 BCL3P20749 454 aa11.94□□□□□ -0.5
SCNN1A-215ENST00000540037 ARL16Q0P5N6 197 aa11.94□□□□□ -0.5
SCNN1A-215ENST00000540037 RAB35Q15286 201 aa11.94□□□□□ -0.5
SCNN1A-215ENST00000540037 TMEM211Q6ICI0 200 aa11.94□□□□□ -0.5
SCNN1A-215ENST00000540037 POM121Q96HA1 1249 aa11.94□□□□□ -0.5
SCNN1A-215ENST00000540037 CABLES2Q9BTV7 478 aa11.94□□□□□ -0.5
SCNN1A-215ENST00000540037 LRFN1Q9P244 771 aa11.94□□□□□ -0.5
SCNN1A-215ENST00000540037 CLDN34H7C241 214 aa11.94□□□□□ -0.5
SCNN1A-215ENST00000540037 IAPPP10997 89 aa11.94□□□□□ -0.5
SCNN1A-215ENST00000540037 SSTP61278 116 aa11.94□□□□□ -0.5
SCNN1A-215ENST00000540037 TMEM42Q69YG0 159 aa11.94□□□□□ -0.5
SCNN1A-215ENST00000540037 ZNF787Q6DD87 383 aa11.94□□□□□ -0.5
SCNN1A-215ENST00000540037 Q6ZRM9 215 aa11.94□□□□□ -0.5
SCNN1A-215ENST00000540037 OR4X1Q8NH49 305 aa11.94□□□□□ -0.5
SCNN1A-215ENST00000540037 M1APQ8TC57 530 aa11.94□□□□□ -0.5
SCNN1A-215ENST00000540037 SEMA5BQ9P283 1151 aa11.94□□□□□ -0.5
SCNN1A-215ENST00000540037 TCFL5Q9UL49 500 aa11.94□□□□□ -0.5
SCNN1A-215ENST00000540037 hCG_38984A0A1B0GV85 526 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 A0A1W2PR80 420 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 SMCO3A2RU48 225 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 TSTD3H0UI37 97 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 IFNL4K9M1U5 179 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 HMGB3O15347 200 aaKnown RBP11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 VDAC1P21796 283 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 TUBG1P23258 451 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 CLN3Q13286 438 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 PRSS8Q16651 343 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 OR13D1Q8NGV5 346 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 SPIN2AQ99865 258 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 SPIN2BQ9BPZ2 258 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 SLC31A2O15432 143 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 ST8SIA5O15466 376 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 CYB5R3P00387 301 aaPredicted RBP11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 TK1P04183 234 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 BCL2P10415 239 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 EDN3P14138 238 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 C20orf204Q6ZNR8 217 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 GPR137CQ8N3F9 429 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 LILRB2Q8N423 598 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 SNIP1Q8TAD8 396 aaKnown RBP11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 CA5BP1Q8WTZ4 195 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 SPOCK3Q9BQ16 436 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 FGF23Q9GZV9 251 aaPredicted RBP11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 PROK2Q9HC23 129 aa11.93□□□□□ -0.5
SCNN1A-215ENST00000540037 CEBPZOSA8MTT3 80 aa11.92□□□□□ -0.5
SCNN1A-215ENST00000540037 C9J4A7 227 aa11.92□□□□□ -0.5
SCNN1A-215ENST00000540037 AMBPP02760 352 aa11.92□□□□□ -0.5
SCNN1A-215ENST00000540037 METTL15P1P0C7V9 234 aa11.92□□□□□ -0.5
SCNN1A-215ENST00000540037 GZMBP10144 247 aa11.92□□□□□ -0.5
SCNN1A-215ENST00000540037 NR2C1P13056 603 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms