RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 NPIPB11E5RHQ5 1161 aa13.68□□□□□ -0.22
SQLE-205ENST00000521232 GEMIN2O14893 280 aaKnown RBP13.68□□□□□ -0.22
SQLE-205ENST00000521232 TSPAN15O95858 294 aa13.68□□□□□ -0.22
SQLE-205ENST00000521232 CELP19835 753 aa13.68□□□□□ -0.22
SQLE-205ENST00000521232 BRS3P32247 399 aa13.68□□□□□ -0.22
SQLE-205ENST00000521232 CEACAM3P40198 252 aa13.68□□□□□ -0.22
SQLE-205ENST00000521232 BLCAPP62952 87 aa13.68□□□□□ -0.22
SQLE-205ENST00000521232 DOC2BQ14184 412 aa13.68□□□□□ -0.22
SQLE-205ENST00000521232 HABP2Q14520 560 aaPredicted RBP13.68□□□□□ -0.22
SQLE-205ENST00000521232 UTF1Q5T230 341 aa13.68□□□□□ -0.22
SQLE-205ENST00000521232 RNLSQ5VYX0 342 aa13.68□□□□□ -0.22
SQLE-205ENST00000521232 CDH26Q8IXH8 852 aa13.68□□□□□ -0.22
SQLE-205ENST00000521232 OR9G1Q8NH87 305 aa13.68□□□□□ -0.22
SQLE-205ENST00000521232 OR14A2Q96R54 314 aa13.68□□□□□ -0.22
SQLE-205ENST00000521232 CALYQ9NYX4 217 aa13.68□□□□□ -0.22
SQLE-205ENST00000521232 IDI2-AS1Q9NZ38 188 aa13.68□□□□□ -0.22
SQLE-205ENST00000521232 NKX1-2Q9UD57 310 aaPredicted RBP13.68□□□□□ -0.22
SQLE-205ENST00000521232 A0A1W2PPK0 400 aa13.67□□□□□ -0.22
SQLE-205ENST00000521232 MYL12BO14950 172 aa13.67□□□□□ -0.22
SQLE-205ENST00000521232 KCNAB3O43448 404 aa13.67□□□□□ -0.22
SQLE-205ENST00000521232 OR7C1O76099 320 aaPredicted RBP13.67□□□□□ -0.22
SQLE-205ENST00000521232 IL1AP01583 271 aa13.67□□□□□ -0.22
SQLE-205ENST00000521232 VSIG10L2P0DP72 767 aa13.67□□□□□ -0.22
SQLE-205ENST00000521232 GTF2F2P13984 249 aa13.67□□□□□ -0.22
SQLE-205ENST00000521232 SERPINA2P20848 420 aa13.67□□□□□ -0.22
SQLE-205ENST00000521232 NFYBP25208 207 aa13.67□□□□□ -0.22
SQLE-205ENST00000521232 GLP1RP43220 463 aa13.67□□□□□ -0.22
SQLE-205ENST00000521232 ARHGDIBP52566 201 aa13.67□□□□□ -0.22
SQLE-205ENST00000521232 GPR176Q14439 515 aa13.67□□□□□ -0.22
SQLE-205ENST00000521232 MPV17LQ2QL34 196 aa13.67□□□□□ -0.22
SQLE-205ENST00000521232 TPTE2P1Q5T6R2 138 aa13.67□□□□□ -0.22
SQLE-205ENST00000521232 Q6ZS46 218 aa13.67□□□□□ -0.22
SQLE-205ENST00000521232 SLC16A12Q6ZSM3 486 aa13.67□□□□□ -0.22
SQLE-205ENST00000521232 C16orf82Q7Z2V1 217 aa13.67□□□□□ -0.22
SQLE-205ENST00000521232 LYPD6Q86Y78 171 aa13.67□□□□□ -0.22
SQLE-205ENST00000521232 OR10A7Q8NGE5 316 aa13.67□□□□□ -0.22
SQLE-205ENST00000521232 WIPF2Q8TF74 440 aaPredicted RBP13.67□□□□□ -0.22
SQLE-205ENST00000521232 DERL3Q96Q80 235 aa13.67□□□□□ -0.22
SQLE-205ENST00000521232 ERGIC3Q9Y282 383 aa13.67□□□□□ -0.22
SQLE-205ENST00000521232 PNMA8CA0A1B0GUJ8 204 aa13.66□□□□□ -0.22
SQLE-205ENST00000521232 A0A1W2PP11 408 aa13.66□□□□□ -0.22
SQLE-205ENST00000521232 OOSP1A8MZH6 123 aa13.66□□□□□ -0.22
SQLE-205ENST00000521232 J3QR06 171 aa13.66□□□□□ -0.22
SQLE-205ENST00000521232 PIN1P1O15428 100 aa13.66□□□□□ -0.22
SQLE-205ENST00000521232 CSF1P09603 554 aa13.66□□□□□ -0.22
SQLE-205ENST00000521232 GZMHP20718 246 aa13.66□□□□□ -0.22
SQLE-205ENST00000521232 SLC22A6Q4U2R8 563 aa13.66□□□□□ -0.22
SQLE-205ENST00000521232 C6orf141Q5SZD1 244 aa13.66□□□□□ -0.22
SQLE-205ENST00000521232 MRGPRDQ8TDS7 321 aa13.66□□□□□ -0.22
SQLE-205ENST00000521232 MRPS24Q96EL2 167 aaKnown RBP13.66□□□□□ -0.22
SQLE-205ENST00000521232 WNT10AQ9GZT5 417 aa13.66□□□□□ -0.22
SQLE-205ENST00000521232 MMP28Q9H239 520 aa13.66□□□□□ -0.22
SQLE-205ENST00000521232 LIN7BQ9HAP6 207 aa13.66□□□□□ -0.22
SQLE-205ENST00000521232 MAS1P04201 325 aa13.65□□□□□ -0.22
SQLE-205ENST00000521232 CDK1P06493 297 aa13.65□□□□□ -0.22
SQLE-205ENST00000521232 CD24P25063 80 aa13.65□□□□□ -0.22
SQLE-205ENST00000521232 DEFA6Q01524 100 aa13.65□□□□□ -0.22
SQLE-205ENST00000521232 CCDC144NLQ6NUI1 221 aa13.65□□□□□ -0.22
SQLE-205ENST00000521232 GLIPR1L1Q6UWM5 242 aa13.65□□□□□ -0.22
SQLE-205ENST00000521232 JAGN1Q8N5M9 183 aa13.65□□□□□ -0.22
SQLE-205ENST00000521232 C11orf44Q8N8P7 122 aa13.65□□□□□ -0.22
SQLE-205ENST00000521232 RFESDQ8TAC1 157 aa13.65□□□□□ -0.22
SQLE-205ENST00000521232 FAM110DQ8TAY7 271 aaPredicted RBP13.65□□□□□ -0.22
SQLE-205ENST00000521232 THRSPQ92748 146 aa13.65□□□□□ -0.22
SQLE-205ENST00000521232 MUL1Q969V5 352 aa13.65□□□□□ -0.22
SQLE-205ENST00000521232 OCSTAMPQ9BR26 566 aa13.65□□□□□ -0.22
SQLE-205ENST00000521232 PSG11Q9UQ72 335 aa13.65□□□□□ -0.22
SQLE-205ENST00000521232 MRPS28Q9Y2Q9 187 aaKnown RBP13.65□□□□□ -0.22
SQLE-205ENST00000521232 TRAV39A0A0B4J263 110 aa13.64□□□□□ -0.23
SQLE-205ENST00000521232 TMEM30CPA0ZSE6 113 aa13.64□□□□□ -0.23
SQLE-205ENST00000521232 SSTR5P35346 364 aa13.64□□□□□ -0.23
SQLE-205ENST00000521232 MNDAP41218 407 aa13.64□□□□□ -0.23
SQLE-205ENST00000521232 RBM39Q14498 530 aaKnown RBP13.64□□□□□ -0.23
SQLE-205ENST00000521232 ATAD3CQ5T2N8 411 aa13.64□□□□□ -0.23
SQLE-205ENST00000521232 HIST2H2BDQ6DRA6 164 aa13.64□□□□□ -0.23
SQLE-205ENST00000521232 UNQ9370/PRO34162Q6UXP9 181 aa13.64□□□□□ -0.23
SQLE-205ENST00000521232 NRG4Q8WWG1 115 aa13.64□□□□□ -0.23
SQLE-205ENST00000521232 AKR1E2Q96JD6 320 aa13.64□□□□□ -0.23
SQLE-205ENST00000521232 RBM14Q96PK6 669 aaKnown RBP13.64□□□□□ -0.23
SQLE-205ENST00000521232 MND1Q9BWT6 205 aa13.64□□□□□ -0.23
SQLE-205ENST00000521232 RCC2Q9P258 522 aaKnown RBP13.64□□□□□ -0.23
SQLE-205ENST00000521232 AMMECR1Q9Y4X0 333 aaPredicted RBP13.64□□□□□ -0.23
SQLE-205ENST00000521232 PRKDCP78527 4128 aaKnown RBP13.64□□□□□ -0.23
SQLE-205ENST00000521232 TGP01266 2768 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 FAM90A18PA6NE21 464 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 FAM90A16PA6NEW6 464 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 FAM90A20PA6NIJ5 464 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 FAM90A9PA6NNJ1 464 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 FAM90A12PA8MX19 464 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 FAM90A5PA8MXJ8 464 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 PTGES3LE9PB15 166 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 OR2F2O95006 317 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 MT-ND4P03905 459 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 FAM90A15PP0C7V4 464 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 FAM90A13PP0C7W8 464 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 FAM90A14PP0C7W9 464 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 FAM90A24PP0C7X0 464 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 MAPK3P27361 379 aaPredicted RBP13.63□□□□□ -0.23
SQLE-205ENST00000521232 FBLN7Q53RD9 439 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 ZNF497Q6ZNH5 498 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms