RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 S1PR3Q99500 378 aa15.78■□□□□ 0.12
SQSTM1-215ENST00000514093 TM2D3Q9BRN9 247 aa15.78■□□□□ 0.12
SQSTM1-215ENST00000514093 B2RBV5 119 aa15.77■□□□□ 0.12
SQSTM1-215ENST00000514093 ZNF736B4DX44 427 aaPredicted RBP15.77■□□□□ 0.12
SQSTM1-215ENST00000514093 I3L521 148 aa15.77■□□□□ 0.12
SQSTM1-215ENST00000514093 OVOL1O14753 267 aa15.77■□□□□ 0.12
SQSTM1-215ENST00000514093 GAPDHP04406 335 aaKnown RBP15.77■□□□□ 0.12
SQSTM1-215ENST00000514093 OCM2P0CE71 109 aa15.77■□□□□ 0.12
SQSTM1-215ENST00000514093 OCMP0CE72 109 aaPredicted RBP15.77■□□□□ 0.12
SQSTM1-215ENST00000514093 SSTR5P35346 364 aa15.77■□□□□ 0.12
SQSTM1-215ENST00000514093 ZNF616Q08AN1 781 aa15.77■□□□□ 0.12
SQSTM1-215ENST00000514093 KIAA0141Q14154 515 aaPredicted RBP15.77■□□□□ 0.12
SQSTM1-215ENST00000514093 NXNL2Q5VZ03 156 aa15.77■□□□□ 0.12
SQSTM1-215ENST00000514093 IZUMO1Q8IYV9 350 aa15.77■□□□□ 0.12
SQSTM1-215ENST00000514093 CANT1Q8WVQ1 401 aa15.77■□□□□ 0.12
SQSTM1-215ENST00000514093 IL4I1Q96RQ9 567 aa15.77■□□□□ 0.12
SQSTM1-215ENST00000514093 NKX1-2Q9UD57 310 aaPredicted RBP15.77■□□□□ 0.12
SQSTM1-215ENST00000514093 NPIPB11E5RHQ5 1161 aa15.76■□□□□ 0.11
SQSTM1-215ENST00000514093 H0YJX3 145 aa15.76■□□□□ 0.11
SQSTM1-215ENST00000514093 ZNF20P17024 532 aa15.76■□□□□ 0.11
SQSTM1-215ENST00000514093 GABPB1Q06547 395 aaPredicted RBP15.76■□□□□ 0.11
SQSTM1-215ENST00000514093 UTS2BQ765I0 119 aa15.76■□□□□ 0.11
SQSTM1-215ENST00000514093 MYOZ3Q8TDC0 251 aa15.76■□□□□ 0.11
SQSTM1-215ENST00000514093 CCDC124Q96CT7 223 aaKnown RBP15.76■□□□□ 0.11
SQSTM1-215ENST00000514093 UBE2E2Q96LR5 201 aa15.76■□□□□ 0.11
SQSTM1-215ENST00000514093 NR1H4Q96RI1 486 aaPredicted RBP15.76■□□□□ 0.11
SQSTM1-215ENST00000514093 LINC00574Q9H8X3 128 aa15.76■□□□□ 0.11
SQSTM1-215ENST00000514093 KRT84Q9NSB2 600 aa15.76■□□□□ 0.11
SQSTM1-215ENST00000514093 ZNF446Q9NWS9 450 aa15.76■□□□□ 0.11
SQSTM1-215ENST00000514093 PLECQ15149 4684 aaKnown RBP15.76■□□□□ 0.11
SQSTM1-215ENST00000514093 UBCP0CG48 685 aaKnown RBP15.75■□□□□ 0.11
SQSTM1-215ENST00000514093 SOX6P35712 828 aa15.75■□□□□ 0.11
SQSTM1-215ENST00000514093 F2RL1P55085 397 aa15.75■□□□□ 0.11
SQSTM1-215ENST00000514093 EFNB1P98172 346 aa15.75■□□□□ 0.11
SQSTM1-215ENST00000514093 PAN3Q58A45 887 aaKnown RBP15.75■□□□□ 0.11
SQSTM1-215ENST00000514093 TMEM65Q6PI78 240 aa15.75■□□□□ 0.11
SQSTM1-215ENST00000514093 ZNF491Q8N8L2 437 aa15.75■□□□□ 0.11
SQSTM1-215ENST00000514093 OR10H4Q8NGA5 316 aa15.75■□□□□ 0.11
SQSTM1-215ENST00000514093 OR13C9Q8NGT0 318 aa15.75■□□□□ 0.11
SQSTM1-215ENST00000514093 PLPPR1Q8TBJ4 325 aa15.75■□□□□ 0.11
SQSTM1-215ENST00000514093 TMEM163Q8TC26 289 aa15.75■□□□□ 0.11
SQSTM1-215ENST00000514093 SPSB1Q96BD6 273 aa15.75■□□□□ 0.11
SQSTM1-215ENST00000514093 BARHL1Q9BZE3 327 aa15.75■□□□□ 0.11
SQSTM1-215ENST00000514093 ALX4Q9H161 411 aaPredicted RBP15.75■□□□□ 0.11
SQSTM1-215ENST00000514093 WSB1Q9Y6I7 421 aa15.75■□□□□ 0.11
SQSTM1-215ENST00000514093 TRAV24A0A0B4J272 114 aa15.74■□□□□ 0.11
SQSTM1-215ENST00000514093 LDLRAD4O15165 306 aa15.74■□□□□ 0.11
SQSTM1-215ENST00000514093 MOSP00540 346 aa15.74■□□□□ 0.11
SQSTM1-215ENST00000514093 MNAT1P51948 309 aa15.74■□□□□ 0.11
SQSTM1-215ENST00000514093 TP53I3Q53FA7 332 aa15.74■□□□□ 0.11
SQSTM1-215ENST00000514093 DLX4Q92988 240 aaPredicted RBP15.74■□□□□ 0.11
SQSTM1-215ENST00000514093 RNF166Q96A37 237 aaPredicted RBP15.74■□□□□ 0.11
SQSTM1-215ENST00000514093 GNG8Q9UK08 70 aa15.74■□□□□ 0.11
SQSTM1-215ENST00000514093 VSIG4Q9Y279 399 aa15.74■□□□□ 0.11
SQSTM1-215ENST00000514093 MITFO75030 526 aaPredicted RBP15.73■□□□□ 0.11
SQSTM1-215ENST00000514093 SULT1C4O75897 302 aa15.73■□□□□ 0.11
SQSTM1-215ENST00000514093 IGF1P05019 195 aa15.73■□□□□ 0.11
SQSTM1-215ENST00000514093 OR2T7P0C7T2 308 aa15.73■□□□□ 0.11
SQSTM1-215ENST00000514093 TMEM225BP0DP42 221 aa15.73■□□□□ 0.11
SQSTM1-215ENST00000514093 EPHA2P29317 976 aa15.73■□□□□ 0.11
SQSTM1-215ENST00000514093 DAPP51397 102 aa15.73■□□□□ 0.11
SQSTM1-215ENST00000514093 SLURP1P55000 103 aa15.73■□□□□ 0.11
SQSTM1-215ENST00000514093 RSBN1Q5VWQ0 802 aaPredicted RBP15.73■□□□□ 0.11
SQSTM1-215ENST00000514093 SLC16A12Q6ZSM3 486 aa15.73■□□□□ 0.11
SQSTM1-215ENST00000514093 ARHGAP24Q8N264 748 aa15.73■□□□□ 0.11
SQSTM1-215ENST00000514093 FAM71E2Q8N5Q1 922 aa15.73■□□□□ 0.11
SQSTM1-215ENST00000514093 TMEM104Q8NE00 496 aa15.73■□□□□ 0.11
SQSTM1-215ENST00000514093 OR10AC1Q8NH08 325 aa15.73■□□□□ 0.11
SQSTM1-215ENST00000514093 UBALD1Q8TB05 177 aa15.73■□□□□ 0.11
SQSTM1-215ENST00000514093 UTP4Q969X6 686 aaKnown RBP15.73■□□□□ 0.11
SQSTM1-215ENST00000514093 ASB9Q96DX5 294 aa15.73■□□□□ 0.11
SQSTM1-215ENST00000514093 G3V318 75 aa15.72■□□□□ 0.11
SQSTM1-215ENST00000514093 IGHV4-30-4P0DP06 118 aa15.72■□□□□ 0.11
SQSTM1-215ENST00000514093 SLC2A2P11168 524 aaPredicted RBP15.72■□□□□ 0.11
SQSTM1-215ENST00000514093 CD1BP29016 333 aa15.72■□□□□ 0.11
SQSTM1-215ENST00000514093 PPIFP30405 207 aaKnown RBP15.72■□□□□ 0.11
SQSTM1-215ENST00000514093 VEGFCP49767 419 aa15.72■□□□□ 0.11
SQSTM1-215ENST00000514093 ZP1P60852 638 aa15.72■□□□□ 0.11
SQSTM1-215ENST00000514093 RUNX1Q01196 453 aa15.72■□□□□ 0.11
SQSTM1-215ENST00000514093 HSP90B2PQ58FF3 399 aa15.72■□□□□ 0.11
SQSTM1-215ENST00000514093 TMEM244Q5VVB8 128 aa15.72■□□□□ 0.11
SQSTM1-215ENST00000514093 SAXO1Q8IYX7 474 aa15.72■□□□□ 0.11
SQSTM1-215ENST00000514093 OR51A4Q8NGJ6 313 aa15.72■□□□□ 0.11
SQSTM1-215ENST00000514093 CNIH3Q8TBE1 160 aa15.72■□□□□ 0.11
SQSTM1-215ENST00000514093 RTN4IP1Q8WWV3 396 aaPredicted RBP15.72■□□□□ 0.11
SQSTM1-215ENST00000514093 PRRG3Q9BZD7 231 aa15.72■□□□□ 0.11
SQSTM1-215ENST00000514093 NCOR1P1Q9H4R4 102 aa15.72■□□□□ 0.11
SQSTM1-215ENST00000514093 RHOFQ9HBH0 211 aa15.72■□□□□ 0.11
SQSTM1-215ENST00000514093 MYRFQ9Y2G1 1151 aa15.72■□□□□ 0.11
SQSTM1-215ENST00000514093 MAGEA13PA6NCF6 341 aa15.71■□□□□ 0.11
SQSTM1-215ENST00000514093 JTBO76095 146 aa15.71■□□□□ 0.11
SQSTM1-215ENST00000514093 HAPLN4Q86UW8 402 aa15.71■□□□□ 0.11
SQSTM1-215ENST00000514093 GID4Q8IVV7 300 aa15.71■□□□□ 0.11
SQSTM1-215ENST00000514093 OR10A7Q8NGE5 316 aa15.71■□□□□ 0.11
SQSTM1-215ENST00000514093 OR2G2Q8NGZ5 317 aa15.71■□□□□ 0.11
SQSTM1-215ENST00000514093 ARPC1AQ92747 370 aa15.71■□□□□ 0.11
SQSTM1-215ENST00000514093 FRRS1LQ9P0K9 344 aa15.71■□□□□ 0.11
SQSTM1-215ENST00000514093 ZNF107Q9UII5 783 aaPredicted RBP15.71■□□□□ 0.11
SQSTM1-215ENST00000514093 OR5H8P0DN80 308 aa15.7■□□□□ 0.1
SQSTM1-215ENST00000514093 MYF6P23409 242 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms