RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 NCOR1P1Q9H4R4 102 aa9.72□□□□□ -0.85
DDX41-215ENST00000512431 NEK6Q9HC98 313 aa9.72□□□□□ -0.85
DDX41-215ENST00000512431 PLSCR3Q9NRY6 295 aa9.72□□□□□ -0.85
DDX41-215ENST00000512431 MRM2Q9UI43 246 aaKnown RBP9.72□□□□□ -0.85
DDX41-215ENST00000512431 ZNF107Q9UII5 783 aaPredicted RBP9.72□□□□□ -0.85
DDX41-215ENST00000512431 KIF25Q9UIL4 384 aa9.72□□□□□ -0.85
DDX41-215ENST00000512431 SORL1Q92673 2214 aa9.72□□□□□ -0.85
DDX41-215ENST00000512431 A0A1W2PPE3 182 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 NPIPB11E5RHQ5 1161 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 HSPB6O14558 160 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 GNGT2O14610 69 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 HSPA12AO43301 675 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 KDM4BO94953 1096 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 ARSBP15848 533 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 ATF1P18846 271 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 IL3RAP26951 378 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 MTNR1BP49286 362 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 RAB9AP51151 201 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 KIAA0141Q14154 515 aaPredicted RBP9.71□□□□□ -0.86
DDX41-215ENST00000512431 HAGHQ16775 308 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 TMEM236Q5W0B7 351 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 FAM53AQ6NSI3 398 aaPredicted RBP9.71□□□□□ -0.86
DDX41-215ENST00000512431 Q6P435 159 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 Q8N1Y9 231 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 OR51T1Q8NGJ9 327 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 OR13A1Q8NGR1 328 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 RNF166Q96A37 237 aaPredicted RBP9.71□□□□□ -0.86
DDX41-215ENST00000512431 RFT1Q96AA3 541 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 SPSB1Q96BD6 273 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 OPALINQ96PE5 141 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 ELOVL1Q9BW60 279 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 TUBA4BQ9H853 241 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 LINC00574Q9H8X3 128 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 FAM118AQ9NWS6 357 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 CLN6Q9NWW5 311 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 NDE1Q9NXR1 346 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 MRPS28Q9Y2Q9 187 aaKnown RBP9.71□□□□□ -0.86
DDX41-215ENST00000512431 WSB1Q9Y6I7 421 aa9.71□□□□□ -0.86
DDX41-215ENST00000512431 IGKV1-12A0A0C4DH73 117 aa9.7□□□□□ -0.86
DDX41-215ENST00000512431 H0YJX3 145 aa9.7□□□□□ -0.86
DDX41-215ENST00000512431 CST1P01037 141 aa9.7□□□□□ -0.86
DDX41-215ENST00000512431 IGKV1D-12P01611 117 aa9.7□□□□□ -0.86
DDX41-215ENST00000512431 ZNF20P17024 532 aa9.7□□□□□ -0.86
DDX41-215ENST00000512431 ATP6V1B2P21281 511 aa9.7□□□□□ -0.86
DDX41-215ENST00000512431 PPIFP30405 207 aaKnown RBP9.7□□□□□ -0.86
DDX41-215ENST00000512431 GALEQ14376 348 aa9.7□□□□□ -0.86
DDX41-215ENST00000512431 PAN3Q58A45 887 aaKnown RBP9.7□□□□□ -0.86
DDX41-215ENST00000512431 SATL1Q86VE3 508 aa9.7□□□□□ -0.86
DDX41-215ENST00000512431 ANKRD13BQ86YJ7 626 aa9.7□□□□□ -0.86
DDX41-215ENST00000512431 MRGPRDQ8TDS7 321 aa9.7□□□□□ -0.86
DDX41-215ENST00000512431 RTN4IP1Q8WWV3 396 aaPredicted RBP9.7□□□□□ -0.86
DDX41-215ENST00000512431 SLC25A19Q9HC21 320 aa9.7□□□□□ -0.86
DDX41-215ENST00000512431 STUB1Q9UNE7 303 aa9.7□□□□□ -0.86
DDX41-215ENST00000512431 KIAA2026Q5HYC2 2103 aa9.7□□□□□ -0.86
DDX41-215ENST00000512431 IGKV1-9A0A0C4DH69 117 aa9.69□□□□□ -0.86
DDX41-215ENST00000512431 LOC107986453A0A1B0GWG9 222 aa9.69□□□□□ -0.86
DDX41-215ENST00000512431 TCRBV5S2A0A599 114 aa9.69□□□□□ -0.86
DDX41-215ENST00000512431 G3V318 75 aa9.69□□□□□ -0.86
DDX41-215ENST00000512431 DYNC1I1O14576 645 aa9.69□□□□□ -0.86
DDX41-215ENST00000512431 IGLV1-40P01703 118 aa9.69□□□□□ -0.86
DDX41-215ENST00000512431 UBCP0CG48 685 aaKnown RBP9.69□□□□□ -0.86
DDX41-215ENST00000512431 F2RL1P55085 397 aa9.69□□□□□ -0.86
DDX41-215ENST00000512431 UTS2BQ765I0 119 aa9.69□□□□□ -0.86
DDX41-215ENST00000512431 DHFR2Q86XF0 187 aa9.69□□□□□ -0.86
DDX41-215ENST00000512431 SAXO1Q8IYX7 474 aa9.69□□□□□ -0.86
DDX41-215ENST00000512431 DEFB107AQ8IZN7 70 aa9.69□□□□□ -0.86
DDX41-215ENST00000512431 OR5D18Q8NGL1 313 aa9.69□□□□□ -0.86
DDX41-215ENST00000512431 FLYWCH2Q96CP2 140 aaKnown RBP9.69□□□□□ -0.86
DDX41-215ENST00000512431 RSRP1Q9BUV0 290 aa9.69□□□□□ -0.86
DDX41-215ENST00000512431 PRRG3Q9BZD7 231 aa9.69□□□□□ -0.86
DDX41-215ENST00000512431 ALX4Q9H161 411 aaPredicted RBP9.69□□□□□ -0.86
DDX41-215ENST00000512431 ZCCHC4Q9H5U6 513 aa9.69□□□□□ -0.86
DDX41-215ENST00000512431 ERGIC3Q9Y282 383 aa9.69□□□□□ -0.86
DDX41-215ENST00000512431 TRAV41A0A0B4J266 112 aa9.68□□□□□ -0.86
DDX41-215ENST00000512431 METTL15A6NJ78 407 aa9.68□□□□□ -0.86
DDX41-215ENST00000512431 TXNL1O43396 289 aa9.68□□□□□ -0.86
DDX41-215ENST00000512431 LY6G6CO95867 125 aa9.68□□□□□ -0.86
DDX41-215ENST00000512431 TMEM225BP0DP42 221 aa9.68□□□□□ -0.86
DDX41-215ENST00000512431 RAP2AP10114 183 aa9.68□□□□□ -0.86
DDX41-215ENST00000512431 SLC2A2P11168 524 aaPredicted RBP9.68□□□□□ -0.86
DDX41-215ENST00000512431 DBTP11182 482 aaKnown RBP9.68□□□□□ -0.86
DDX41-215ENST00000512431 ANXA8P13928 327 aa9.68□□□□□ -0.86
DDX41-215ENST00000512431 GZMHP20718 246 aa9.68□□□□□ -0.86
DDX41-215ENST00000512431 SSTR5P35346 364 aa9.68□□□□□ -0.86
DDX41-215ENST00000512431 TMEM104Q8NE00 496 aa9.68□□□□□ -0.86
DDX41-215ENST00000512431 FGGYQ96C11 551 aa9.68□□□□□ -0.86
DDX41-215ENST00000512431 ADAT3Q96EY9 351 aaPredicted RBP9.68□□□□□ -0.86
DDX41-215ENST00000512431 NR1H4Q96RI1 486 aaPredicted RBP9.68□□□□□ -0.86
DDX41-215ENST00000512431 TBX5Q99593 518 aa9.68□□□□□ -0.86
DDX41-215ENST00000512431 TMED9Q9BVK6 235 aa9.68□□□□□ -0.86
DDX41-215ENST00000512431 TOLLIPQ9H0E2 274 aa9.68□□□□□ -0.86
DDX41-215ENST00000512431 ADGRL4Q9HBW9 690 aa9.68□□□□□ -0.86
DDX41-215ENST00000512431 PARP11Q9NR21 331 aa9.68□□□□□ -0.86
DDX41-215ENST00000512431 IGHV4OR15-8A0A075B7B6 117 aa9.67□□□□□ -0.86
DDX41-215ENST00000512431 A0A087WW49 117 aa9.67□□□□□ -0.86
DDX41-215ENST00000512431 FAM90A10PA6NDY2 464 aa9.67□□□□□ -0.86
DDX41-215ENST00000512431 ZNF736B4DX44 427 aaPredicted RBP9.67□□□□□ -0.86
DDX41-215ENST00000512431 C12orf77C9JDV5 145 aa9.67□□□□□ -0.86
DDX41-215ENST00000512431 SDCBPO00560 298 aaPredicted RBP9.67□□□□□ -0.86
DDX41-215ENST00000512431 ARPC1BO15143 372 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms