RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 NRASP01111 189 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 AMBPP02760 352 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 OR1D5P58170 312 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 DEFB133Q30KQ1 61 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 TCEAL6Q6IPX3 200 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 FIP1L1Q6UN15 594 aaKnown RBP15.29■□□□□ 0.04
NUP54-205ENST00000507257 SHISA6Q6ZSJ9 500 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 RABEPKQ7Z6M1 372 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 MRGPRGQ86SM5 289 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 OR1P1Q8NH06 330 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 MISP3Q96FF7 219 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 ACY3Q96HD9 319 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 ZNF845Q96IR2 970 aaPredicted RBP15.29■□□□□ 0.04
NUP54-205ENST00000507257 RAB40CQ96S21 281 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 MAGT1Q9H0U3 335 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 SLC7A10Q9NS82 523 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 VAX2Q9UIW0 290 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 FAM221AA4D161 298 aa15.28■□□□□ 0.04
NUP54-205ENST00000507257 TK1P04183 234 aa15.28■□□□□ 0.04
NUP54-205ENST00000507257 HNRNPKP61978 463 aaKnown RBP eCLIP15.28■□□□□ 0.047e-6■□□□□ 8.5
NUP54-205ENST00000507257 HYAL1Q12794 435 aa15.28■□□□□ 0.04
NUP54-205ENST00000507257 ZNF154Q13106 437 aa15.28■□□□□ 0.04
NUP54-205ENST00000507257 ZNF787Q6DD87 383 aa15.28■□□□□ 0.04
NUP54-205ENST00000507257 TMEM217Q8N7C4 229 aa15.28■□□□□ 0.04
NUP54-205ENST00000507257 PARD6GQ9BYG4 376 aaPredicted RBP15.28■□□□□ 0.04
NUP54-205ENST00000507257 OR2J2O76002 312 aa15.27■□□□□ 0.04
NUP54-205ENST00000507257 PFN1P07737 140 aaKnown RBP15.27■□□□□ 0.04
NUP54-205ENST00000507257 BTF3P20290 206 aaKnown RBP15.27■□□□□ 0.04
NUP54-205ENST00000507257 CD27P26842 260 aa15.27■□□□□ 0.04
NUP54-205ENST00000507257 SERF2P84101 59 aa15.27■□□□□ 0.04
NUP54-205ENST00000507257 P4HA3Q7Z4N8 544 aa15.27■□□□□ 0.04
NUP54-205ENST00000507257 GPR137CQ8N3F9 429 aa15.27■□□□□ 0.04
NUP54-205ENST00000507257 RPRMQ9NS64 109 aa15.27■□□□□ 0.04
NUP54-205ENST00000507257 IFNA1P01562 189 aa15.27■□□□□ 0.03
NUP54-205ENST00000507257 CST2P09228 141 aa15.27■□□□□ 0.03
NUP54-205ENST00000507257 CTXN2P0C2S0 81 aa15.27■□□□□ 0.03
NUP54-205ENST00000507257 HNF4GQ14541 408 aa15.27■□□□□ 0.03
NUP54-205ENST00000507257 DAZAP2Q15038 168 aaPredicted RBP15.27■□□□□ 0.03
NUP54-205ENST00000507257 TRIM61Q5EBN2 209 aa15.27■□□□□ 0.03
NUP54-205ENST00000507257 WDR25Q64LD2 544 aaPredicted RBP15.27■□□□□ 0.03
NUP54-205ENST00000507257 THNSL2Q86YJ6 484 aa15.27■□□□□ 0.03
NUP54-205ENST00000507257 OR2AE1Q8NHA4 323 aa15.27■□□□□ 0.03
NUP54-205ENST00000507257 SPACA9Q96E40 222 aaPredicted RBP15.27■□□□□ 0.03
NUP54-205ENST00000507257 RBM24Q9BX46 236 aaKnown RBP15.27■□□□□ 0.03
NUP54-205ENST00000507257 ZNF442Q9H7R0 627 aa15.27■□□□□ 0.03
NUP54-205ENST00000507257 Q9N2K0 584 aa15.27■□□□□ 0.03
NUP54-205ENST00000507257 TAAR3PQ9P1P4 343 aa15.27■□□□□ 0.03
NUP54-205ENST00000507257 LRFN1Q9P244 771 aa15.27■□□□□ 0.03
NUP54-205ENST00000507257 NAT8Q9UHE5 227 aa15.27■□□□□ 0.03
NUP54-205ENST00000507257 NPIPA2E9PIF3 369 aa15.26■□□□□ 0.03
NUP54-205ENST00000507257 NPIPA3F8WFD2 350 aa15.26■□□□□ 0.03
NUP54-205ENST00000507257 C4orf17Q53FE4 359 aa15.26■□□□□ 0.03
NUP54-205ENST00000507257 FAM69BQ5VUD6 431 aa15.26■□□□□ 0.03
NUP54-205ENST00000507257 ZNF818PQ6ZRF7 136 aa15.26■□□□□ 0.03
NUP54-205ENST00000507257 CYP2G1PQ6ZSU1 146 aa15.26■□□□□ 0.03
NUP54-205ENST00000507257 GAPTQ8N292 157 aa15.26■□□□□ 0.03
NUP54-205ENST00000507257 ZNF664Q8N3J9 261 aa15.26■□□□□ 0.03
NUP54-205ENST00000507257 OR1F12Q8NHA8 337 aa15.26■□□□□ 0.03
NUP54-205ENST00000507257 ZNF385AQ96PM9 386 aaKnown RBP15.26■□□□□ 0.03
NUP54-205ENST00000507257 ULBP2Q9BZM5 246 aa15.26■□□□□ 0.03
NUP54-205ENST00000507257 ZNF665Q9H7R5 613 aa15.26■□□□□ 0.03
NUP54-205ENST00000507257 CRLF2Q9HC73 371 aa15.26■□□□□ 0.03
NUP54-205ENST00000507257 KIAA0100Q14667 2235 aaKnown RBP15.26■□□□□ 0.03
NUP54-205ENST00000507257 OR6C6A6NF89 314 aa15.25■□□□□ 0.03
NUP54-205ENST00000507257 NAPSAO96009 420 aa15.25■□□□□ 0.03
NUP54-205ENST00000507257 CLDN15P56746 228 aa15.25■□□□□ 0.03
NUP54-205ENST00000507257 NUTF2P61970 127 aaKnown RBP15.25■□□□□ 0.03
NUP54-205ENST00000507257 BRICD5Q6PL45 260 aa15.25■□□□□ 0.03
NUP54-205ENST00000507257 PINX1Q96BK5 328 aaKnown RBP15.25■□□□□ 0.03
NUP54-205ENST00000507257 hCG_38984A0A1B0GV85 526 aa15.25■□□□□ 0.03
NUP54-205ENST00000507257 SLC22A20A6NK97 555 aa15.25■□□□□ 0.03
NUP54-205ENST00000507257 KIAA1324LA8MWY0 1029 aaPredicted RBP15.25■□□□□ 0.03
NUP54-205ENST00000507257 MPV17LQ2QL34 196 aa15.25■□□□□ 0.03
NUP54-205ENST00000507257 SPIN3Q5JUX0 258 aa15.25■□□□□ 0.03
NUP54-205ENST00000507257 ZNF295-AS1Q8N0V1 137 aa15.25■□□□□ 0.03
NUP54-205ENST00000507257 SCGB1C1Q8TD33 95 aa15.25■□□□□ 0.03
NUP54-205ENST00000507257 KIR2DS1A0A191URI9 304 aa15.24■□□□□ 0.03
NUP54-205ENST00000507257 ZFP92A6NM28 416 aa15.24■□□□□ 0.03
NUP54-205ENST00000507257 KIR2DS4P43632 304 aa15.24■□□□□ 0.03
NUP54-205ENST00000507257 FAM3BP58499 235 aaPredicted RBP15.24■□□□□ 0.03
NUP54-205ENST00000507257 DLX2Q07687 328 aaPredicted RBP15.24■□□□□ 0.03
NUP54-205ENST00000507257 KIR2DS1Q14954 304 aa15.24■□□□□ 0.03
NUP54-205ENST00000507257 SLC10A1Q14973 349 aa15.24■□□□□ 0.03
NUP54-205ENST00000507257 ZNF726P1Q15940 193 aa15.24■□□□□ 0.03
NUP54-205ENST00000507257 WDR74Q6RFH5 385 aaPredicted RBP15.24■□□□□ 0.03
NUP54-205ENST00000507257 C5orf24Q7Z6I8 188 aa15.24■□□□□ 0.03
NUP54-205ENST00000507257 MRPL37Q9BZE1 423 aaKnown RBP15.24■□□□□ 0.03
NUP54-205ENST00000507257 CLEC1BQ9P126 229 aa15.24■□□□□ 0.03
NUP54-205ENST00000507257 OR14J1Q9UGF5 321 aa15.24■□□□□ 0.03
NUP54-205ENST00000507257 IGHV1OR15-9A0A0B4J2B8 117 aa15.23■□□□□ 0.03
NUP54-205ENST00000507257 TCAPO15273 167 aa15.23■□□□□ 0.03
NUP54-205ENST00000507257 LCATP04180 440 aa15.23■□□□□ 0.03
NUP54-205ENST00000507257 FOXL2P58012 376 aa15.23■□□□□ 0.03
NUP54-205ENST00000507257 COL10A1Q03692 680 aa15.23■□□□□ 0.03
NUP54-205ENST00000507257 NKAIN1Q4KMZ8 207 aa15.23■□□□□ 0.03
NUP54-205ENST00000507257 SLC25A24Q6NUK1 477 aa15.23■□□□□ 0.03
NUP54-205ENST00000507257 C7orf61Q8IZ16 206 aa15.23■□□□□ 0.03
NUP54-205ENST00000507257 TMEM170AQ8WVE7 144 aa15.23■□□□□ 0.03
NUP54-205ENST00000507257 EXTL1Q92935 676 aa15.23■□□□□ 0.03
NUP54-205ENST00000507257 RASL10BQ96S79 203 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms