RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 MUL1Q969V5 352 aa10.09□□□□□ -0.79
HSPG2-212ENST00000493940 DERL3Q96Q80 235 aa10.09□□□□□ -0.79
HSPG2-212ENST00000493940 OCSTAMPQ9BR26 566 aa10.09□□□□□ -0.79
HSPG2-212ENST00000493940 GAL3ST2Q9H3Q3 398 aa10.09□□□□□ -0.79
HSPG2-212ENST00000493940 RANBP3Q9H6Z4 567 aaPredicted RBP10.09□□□□□ -0.79
HSPG2-212ENST00000493940 LINC00574Q9H8X3 128 aa10.09□□□□□ -0.79
HSPG2-212ENST00000493940 C8orf4Q9NR00 106 aa10.09□□□□□ -0.79
HSPG2-212ENST00000493940 CALYQ9NYX4 217 aa10.09□□□□□ -0.79
HSPG2-212ENST00000493940 IL36GQ9NZH8 169 aa10.09□□□□□ -0.79
HSPG2-212ENST00000493940 DPM3Q9P2X0 92 aa10.09□□□□□ -0.79
HSPG2-212ENST00000493940 LSM2Q9Y333 95 aaKnown RBP10.09□□□□□ -0.79
HSPG2-212ENST00000493940 A0A1W2PPE3 182 aa10.08□□□□□ -0.8
HSPG2-212ENST00000493940 EFCAB10A6NFE3 127 aa10.08□□□□□ -0.8
HSPG2-212ENST00000493940 C15orf65H3BRN8 121 aa10.08□□□□□ -0.8
HSPG2-212ENST00000493940 MAS1P04201 325 aa10.08□□□□□ -0.8
HSPG2-212ENST00000493940 SSTR5P35346 364 aa10.08□□□□□ -0.8
HSPG2-212ENST00000493940 GLP1RP43220 463 aa10.08□□□□□ -0.8
HSPG2-212ENST00000493940 AQP4P55087 323 aa10.08□□□□□ -0.8
HSPG2-212ENST00000493940 WNT4P56705 351 aa10.08□□□□□ -0.8
HSPG2-212ENST00000493940 RIPK1Q13546 671 aa10.08□□□□□ -0.8
HSPG2-212ENST00000493940 NHLRC3Q5JS37 347 aa10.08□□□□□ -0.8
HSPG2-212ENST00000493940 C6orf141Q5SZD1 244 aa10.08□□□□□ -0.8
HSPG2-212ENST00000493940 TPTE2P1Q5T6R2 138 aa10.08□□□□□ -0.8
HSPG2-212ENST00000493940 UNQ9370/PRO34162Q6UXP9 181 aa10.08□□□□□ -0.8
HSPG2-212ENST00000493940 RTN4RL2Q86UN3 420 aa10.08□□□□□ -0.8
HSPG2-212ENST00000493940 C1QL4Q86Z23 238 aa10.08□□□□□ -0.8
HSPG2-212ENST00000493940 OR2T6Q8NHC8 308 aa10.08□□□□□ -0.8
HSPG2-212ENST00000493940 DPCDQ9BVM2 203 aaPredicted RBP10.08□□□□□ -0.8
HSPG2-212ENST00000493940 WNT10AQ9GZT5 417 aa10.08□□□□□ -0.8
HSPG2-212ENST00000493940 METTL9Q9H1A3 318 aa10.08□□□□□ -0.8
HSPG2-212ENST00000493940 DCLRE1BQ9H816 532 aa10.08□□□□□ -0.8
HSPG2-212ENST00000493940 PSG11Q9UQ72 335 aa10.08□□□□□ -0.8
HSPG2-212ENST00000493940 FUOMA2VDF0 154 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 PTGES3LE9PB15 166 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 J3QR06 171 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 M0QZ24 198 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 F2RL2O00254 374 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 OR7C1O76099 320 aaPredicted RBP10.07□□□□□ -0.8
HSPG2-212ENST00000493940 CDK1P06493 297 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 FSTP19883 344 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 PAX5Q02548 391 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 SLC22A6Q4U2R8 563 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 YIF1BQ5BJH7 314 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 SIGIRRQ6IA17 410 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 OR52W1Q6IF63 320 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 C10orf99Q6UWK7 81 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 LIAT1Q6ZQX7 453 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 STX19Q8N4C7 294 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 TMEM104Q8NE00 496 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 CCDC107Q8WV48 283 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 NPFFR1Q9GZQ6 430 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 MMP27Q9H306 513 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 NCOR1P1Q9H4R4 102 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 BANF2Q9H503 90 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 IFT22Q9H7X7 185 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 RAB18Q9NP72 206 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 ABCB10Q9NRK6 738 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 CHCHD3Q9NX63 227 aaKnown RBP10.07□□□□□ -0.8
HSPG2-212ENST00000493940 IDI2-AS1Q9NZ38 188 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 OR6C3Q9NZP0 311 aa10.07□□□□□ -0.8
HSPG2-212ENST00000493940 IL1AP01583 271 aa10.06□□□□□ -0.8
HSPG2-212ENST00000493940 CD1AP06126 327 aa10.06□□□□□ -0.8
HSPG2-212ENST00000493940 PPP3R1P63098 170 aa10.06□□□□□ -0.8
HSPG2-212ENST00000493940 RBM39Q14498 530 aaKnown RBP10.06□□□□□ -0.8
HSPG2-212ENST00000493940 IRF3Q14653 427 aa10.06□□□□□ -0.8
HSPG2-212ENST00000493940 TCTEX1D4Q5JR98 221 aa10.06□□□□□ -0.8
HSPG2-212ENST00000493940 GLIPR1L1Q6UWM5 242 aa10.06□□□□□ -0.8
HSPG2-212ENST00000493940 BARHL1Q9BZE3 327 aa10.06□□□□□ -0.8
HSPG2-212ENST00000493940 KCNK15Q9H427 330 aa10.06□□□□□ -0.8
HSPG2-212ENST00000493940 MRPS28Q9Y2Q9 187 aaKnown RBP10.06□□□□□ -0.8
HSPG2-212ENST00000493940 IGHV3-43A0A0B4J1X8 118 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 A0A1W2PPI3 338 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 FAM90A18PA6NE21 464 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 FAM90A16PA6NEW6 464 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 FAM90A20PA6NIJ5 464 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 FAM90A9PA6NNJ1 464 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 FAM90A12PA8MX19 464 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 FAM90A5PA8MXJ8 464 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 LEUTXA8MZ59 168 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 MT-ND4P03905 459 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 CSTBP04080 98 aaKnown RBP10.05□□□□□ -0.8
HSPG2-212ENST00000493940 CSF1P09603 554 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 FAM90A15PP0C7V4 464 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 FAM90A13PP0C7W8 464 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 FAM90A14PP0C7W9 464 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 FAM90A24PP0C7X0 464 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 IGHV3-43DP0DP04 118 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 GNG10P50151 68 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 LOXL3P58215 753 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 SLC35A2P78381 396 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 ACSM3Q53FZ2 586 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 ATAD3CQ5T2N8 411 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 RNLSQ5VYX0 342 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 OR10K2Q6IF99 312 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 ZNF497Q6ZNH5 498 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 Q6ZTK2 550 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 LRRTM1Q86UE6 522 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 JAGN1Q8N5M9 183 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 ZNF565Q8N9K5 539 aa10.05□□□□□ -0.8
HSPG2-212ENST00000493940 OR9G1Q8NH87 305 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms