RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 C19orf54Q5BKX5 351 aa10.34□□□□□ -0.75
EXOSC3-207ENST00000490516 BCL2L15Q5TBC7 163 aa10.34□□□□□ -0.75
EXOSC3-207ENST00000490516 GLYATQ6IB77 296 aa10.34□□□□□ -0.75
EXOSC3-207ENST00000490516 Q6P435 159 aa10.34□□□□□ -0.75
EXOSC3-207ENST00000490516 Q6ZSR3 168 aa10.34□□□□□ -0.75
EXOSC3-207ENST00000490516 ELMOD2Q8IZ81 293 aa10.34□□□□□ -0.75
EXOSC3-207ENST00000490516 ZNF565Q8N9K5 539 aa10.34□□□□□ -0.75
EXOSC3-207ENST00000490516 SPACA5Q96QH8 159 aa10.34□□□□□ -0.75
EXOSC3-207ENST00000490516 LINC00574Q9H8X3 128 aa10.34□□□□□ -0.75
EXOSC3-207ENST00000490516 SLC25A19Q9HC21 320 aa10.34□□□□□ -0.75
EXOSC3-207ENST00000490516 ETAA1Q9NY74 926 aa10.34□□□□□ -0.75
EXOSC3-207ENST00000490516 FBXO7Q9Y3I1 522 aa10.34□□□□□ -0.75
EXOSC3-207ENST00000490516 MEIKINA0A087WXM9 373 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 TRAV39A0A0B4J263 110 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 DHRS7CA6NNS2 312 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 NPIPB11E5RHQ5 1161 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 LOC110117498-PIK3R3F6TDL0 507 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 HSPB6O14558 160 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 TFAP2AP05549 437 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 SSTR5P35346 364 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 RIDAP52758 137 aaKnown RBP10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 MMDQ15546 238 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 PLEKHG7Q6ZR37 379 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 SLC16A12Q6ZSM3 486 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 LINC00336Q6ZUF6 198 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 ZNF679Q8IYX0 411 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 Q8N402 240 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 OR9G4Q8NGQ1 327 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 MRGPRDQ8TDS7 321 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 KCTD12Q96CX2 325 aaKnown RBP10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 PYURFQ96I23 114 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 MS4A10Q96PG2 267 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 COMMD4Q9H0A8 199 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 TMBIM4Q9HC24 238 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 IL1RAPQ9NPH3 570 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 MYRFQ9Y2G1 1151 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 DNAH6Q9C0G6 4158 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 DNAH2Q9P225 4427 aa10.33□□□□□ -0.76
EXOSC3-207ENST00000490516 IGKV1-12A0A0C4DH73 117 aa10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 ARPC1BO15143 372 aaKnown RBP10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 MAGEB4O15481 346 aaPredicted RBP10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 ZNF254O75437 659 aa10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 CYB5AP00167 134 aa10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 IGKV1D-12P01611 117 aa10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 HLA-DRB1P01911 266 aa10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 FABP3P05413 133 aa10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 C21orf33P30042 268 aaPredicted RBP10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 NDPQ00604 133 aa10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 ROM1Q03395 351 aa10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 ODF4Q2M2E3 257 aa10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 LYG2Q86SG7 212 aa10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 AQP11Q8NBQ7 271 aa10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 BBS1Q8NFJ9 593 aa10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 DYDC1Q8WWB3 177 aa10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 RHOVQ96L33 236 aa10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 SAR1AQ9NR31 198 aa10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 OR52A1Q9UKL2 312 aa10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 IKZF2Q9UKS7 526 aa10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 FOXA2Q9Y261 457 aaPredicted RBP10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 DYNC1H1Q14204 4646 aaKnown RBP10.32□□□□□ -0.76
EXOSC3-207ENST00000490516 CSN3P07498 182 aa10.31□□□□□ -0.76
EXOSC3-207ENST00000490516 MRPL3P09001 348 aaKnown RBP10.31□□□□□ -0.76
EXOSC3-207ENST00000490516 ATP1B3P54709 279 aa10.31□□□□□ -0.76
EXOSC3-207ENST00000490516 PPP1R8Q12972 351 aaKnown RBP10.31□□□□□ -0.76
EXOSC3-207ENST00000490516 KLF5Q13887 457 aaPredicted RBP10.31□□□□□ -0.76
EXOSC3-207ENST00000490516 OR51T1Q8NGJ9 327 aa10.31□□□□□ -0.76
EXOSC3-207ENST00000490516 PHLDA1Q8WV24 401 aaPredicted RBP10.31□□□□□ -0.76
EXOSC3-207ENST00000490516 RITA1Q96K30 269 aa10.31□□□□□ -0.76
EXOSC3-207ENST00000490516 ANKRD60Q9BZ19 345 aa10.31□□□□□ -0.76
EXOSC3-207ENST00000490516 YIPF3Q9GZM5 350 aa10.31□□□□□ -0.76
EXOSC3-207ENST00000490516 CHST5Q9GZS9 411 aa10.31□□□□□ -0.76
EXOSC3-207ENST00000490516 ADAM30Q9UKF2 790 aa10.31□□□□□ -0.76
EXOSC3-207ENST00000490516 A3GALT2U3KPV4 340 aa10.31□□□□□ -0.76
EXOSC3-207ENST00000490516 OR11H12B2RN74 326 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 DEGS1O15121 323 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 PRODHO43272 600 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 E2F6O75461 281 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 GATBO75879 557 aaKnown RBP10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 ZP3P21754 424 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 CCL1P22362 96 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 FASP25445 335 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 VHLP40337 213 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 RBP2P50120 134 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 HMGA2P52926 109 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 SYNJ2BPP57105 145 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 TPPP2P59282 170 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 RPS7P62081 194 aaKnown RBP10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 TNFRSF9Q07011 255 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 LRRC36Q1X8D7 754 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 C8orf82Q6P1X6 216 aaPredicted RBP10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 CPOQ8IVL8 374 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 CHST4Q8NCG5 386 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 OR10A7Q8NGE5 316 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 RFT1Q96AA3 541 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 MCUR1Q96AQ8 359 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 APOL4Q9BPW4 351 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 MOB1AQ9H8S9 216 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 R4GMQ9 66 aa10.3□□□□□ -0.76
EXOSC3-207ENST00000490516 ANKRD34BA5PLL1 514 aa10.29□□□□□ -0.76
EXOSC3-207ENST00000490516 TNFRSF11BO00300 401 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms